Telomere biology of trypanosomatids: beginning to answer some questions

Studies of telomere structure and maintenance in trypanosomatids have provided insights into the evolutionary origin and conservation of some telomeric components shared by trypanosomes and vertebrates. For example, trypanosomatid telomeres are maintained by telomerase and consist of the canonical TTAGGG repeats, which in Trypanosoma brucei can form telomeric loops (t-loops). However, the telomeric chromatin of trypanosomatids is composed of organ ism-specific proteins and other proteins that share little sequence similarity with their vertebrate counterparts. Because telomere maintenance mechanisms are essential for genome stability, we propose that the particular features shown by the trypanosome telomeric chromatin hold the key for the design of antiparasitic drugs.

Cryptic hammerhead shark lineage occurrence in the western South Atlantic revealed by DNA analysis

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Genetic differentiation among ten populations of the genus Neoplecostomus (Teleostei: Loricariidae) from the upper Parana River basin

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Exotic snakes in São Paulo City, southeastern Brazil: Why xenophobia ?

Introduced exotic species cause environmental changes and threat public health in target sites. Illegal trade has enhanced this problem. To first report these risks in Brazil, exotic snakes found in São Paulo City (SPC) (23degrees32' S, 46degrees38' W), southeastern Brazil, and sent to Instituto Butantan between 1995 and 2000, were listed and characterized by their biological attributes. Seventy-six individuals of sixteen alien species were collected. Euriecians snakes, mainly booids, were predominant. Using multivariate techniques, their ecological niches were compared to those of 26 native species, as a way to point out the resource's availability. To evaluate the potential of successful implantation, two species absent in SPC and considered as problem snakes are included in these analyses: the brown treesnake Boiga irregularis and the habu Trimeresurus flavoviridis. There were niche similarities between these pest snakes, exotic booids and native viperids largely due to the similarities in the chosen prey (mammals), diel activity (nocturnal), color pattern (variegated) and body size (medium to large). To avoid predictable undesirable effects of implanted pest snakes, traffic control and punishment should be improved, as well as parallel environmental education programs.

Biodiversity of brachyuran crabs (Crustacea : Decapoda) from non-consolidated sublittoral bottom on the northern coast of São Paulo State, Brazil

The brachyuran community of the coast of São Paulo State is represented by about 188 species of crabs inhabiting different kinds of coastal marine environments. The biodiversity of brachyurans found on non-consolidated sublittoral bottom was investigated. The Ubatuba region (Ubatumirim, Ubatuba and Mar Virado bays, Couves and Mar Virado Islands, offshore region) was sampled for 3 years (1998-2000), at depths of 2-40 m. All sampling was performed using a fishing boat equipped with two double-rig nets. We collected 79 brachyuran species representing 9 superfamilies (4 Dromioidea, 1 Homoloidea, 2 Calappoidea, 5 Leucosioidea, 20 Majoidea, 7 Parthenopoidea, 17 Portunoidea, 18 Xanthoidea, and 5 Pinnotheroidea) and 41 genera. Ubatuba bay showed the greatest species richness with 50 species, followed by Ubatumirim with 45 and Mar Virado with 29. The number of species collected represents about 57% of the known species of crabs already reported for the shore of São Paulo State. It is worth noticing that this percentage is restricted only to non-consolidated sublittoral bottom. This fact indicates a great biodiversity of the habitat in this studied region, probably one to the diversity of habitat types present in the bays.

Subtropical Brazilian mangroves as a refuge of crab (Decapoda: Brachyura) diversity

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Use of forest fragments by blue-winged macaws (Primolius maracana) within a fragmented landscape

Parrots are the most threatened group of birds in the world, mainly because of the reduction and fragmentation of their natural habitats. However, few studies have investigated the dynamics of parrot populations in disturbed landscapes on a broad scale. In this paper, we studied the ecological interactions of the vulnerable blue-winged macaw (Primolius maracana) in a fragmented landscape surrounding a large protected park in southeastern Brazil. We sampled 36 forest fragments that varied in size, characteristics, degree of isolation and type of surrounding matrix in order to assess the importance of habitat features on the maintenance of these birds. Blue-winged macaws were recorded in 70% of the satellite remnants that were sampled, which included large and small blocks of forest. These areas were used as sites for feeding, nesting or overnight rests, and also provided connectivity for birds' displacements. However, the frequency of macaw visits varied among the remnants, and this was related to habitat features such as patch size, human use of surrounding land, and the proximity to the protected park, to urban areas and to the birds' roosting areas. In general, landscape-scale parameters explained more of the variation in the frequency of visits by macaws than did patch-scale parameters. These results demonstrate the importance of landscape mosaics for the survival of blue-winged macaws.

How well will Brazil's system of atlantic forest reserves maintain viable bird populations?

It is crucial for biodiversity conservation that protected areas are large and effective enough to support viable populations of their original species. We used a point count distance sampling method to estimate population sizes of a range of bird species in three Atlantic forest protected areas of size 5600, 22,500, and 46,050 ha. Population sizes were generally related to reserve area, although in the mid-sized reserve, there were many rare species reflecting a high degree of habitat heterogeneity. The proportions of forest species having estimated populations > 500 ranged from 55% of 210 species in the largest reserve to just 25% of 140 species in the smallest reserve. All forest species in the largest reserves had expected populations > 100, but in the small reserve, 28% (38 species) had populations < 100 individuals. Atlantic forest endemics were no more or less likely to have small populations than widespread species. There are 79 reserves (> 1000 ha) in the Atlantic forest lowlands. However, all but three reserves in the north of the region (Espirito Santo and states north) are smaller than 10,000 ha, and we predict serious levels of local extinction from these reserves. Habitat heterogeneity within reserves may promote species richness within them, but it may also be important in determining species loss over time by suppressing populations of individual species. We suggest that most reserves in the region are so small that homogeneity in the habitat/altitude within them is beneficial for maintenance of their (comparatively small) original species compliment. A lack of protection in the north, continued detrimental human activity inside reserves, and our poor knowledge of how well the reserve system protects individual taxa, are crucial considerations in biodiversity management in the region.

Composição e abundância da ictiofauna de duas lagunas costeiras da América do Sul Austral: lagoa do Peixe (31ºS; 51ºW), Brasil e laguna Mar Chiquita (37ºS; 57ºW), Argentina

This article describes and compares the shallow water fish-fauna from two coastal lagoons (Peixe Lagoon, in Brazil, and Mar Chiquita Lagoon, in Argentina). Peixe Lagoon was sampled between 2000 and 2001 using a 9 m beach seine net (12 mm bar mesh in the wings and 5 mm in the centre 3 m section) totalizing 125 samples, which yielded 33,848 individuals and 32 species. Mar Chiquita Lagoon was sampled from 1995 to 1998 using a 21) m beach seine net (12 mm bar mesh) totalizing 232 samples resulting in 31,097 individuals of 28 species. A total of 47 species were observed in both lagoons and 13 were shared. The "marine-estuarine-related" species were similar and dominate the fish assemblages in both lagoons. The remaining species were similar to the species collected along the southern Brazil, Uruguay and Argentina estuaries. The number of species observed in Peixe Lagoon (S = 32) was higher than in Mar Chiquita Lagoon (S = 28) and is probably associated with a strong latitudinal gradient of species richness increasing from north to south. Considering that the Peixe Lagoon and Mar Chiquita Lagoon are isolated by the large estuaries of Patos Lagoon and Prata River, the composition of the species with low abundance and occasional occurrence were different for each local studied. These results expand the knowledge for the fauna of both sites and help conservation and management from both lagoons.

Modelagem do nicho ecológico de Phyllomedusa ayeaye (Anura: Hylidae): previsão de novas áreas de ocorrência para uma espécie rara

The tree-frog Phyllomedusa ayeaye is a rare species. With its distribution mostly unknown in the southeastern region of Brazil, it is considered one of the most threatened anurans in the country. Here we use ecological niche modelling from only three known occurrence points to produce predictive maps of the distribution of this species, which should help target new field surveys in areas of occurrence predicted by the model. This is the first study in Brazil that uses ecological niche modelling as a tool for predicting the distribution of rare and threatened amphibian anuran species.

Distribuição e abundância de espécies arbóreas em cerradões no Pantanal, Estado do Mato Grosso do Sul, Brasil

Os cerradões no Pantanal ocorrem em áreas não inundáveis da planície e são importantes para a economia regional. Das áreas de cerradão são retiradas madeiras para construção de cercas, currais e galpões. Apesar da grande importância dos recursos vegetais do cerradão, existem poucas informações para embasar sua conservação e uso sustentável. Este trabalho teve como objetivos estudar a abundância, a distribuição das espécies arbóreas e correlações com a fertilidade do solo em áreas de cerradão (savana florestada) do Pantanal Sul Mato-grossense. Foram estudadas seis áreas de cerradão na sub-região da Nhecolândia, por meio de 30 pontos quadrantes, totalizando 120 árvores amostradas, com circunferência a altura do peito (CAP) > 15 cm, em cada área. As comparações florísticas, de abundância das espécies e de fertilidade do solo, foram efetuadas por análises de componentes principais (PCA). As áreas mostraram-se heterogêneas, apresentando diferentes níveis de fertilidade do solo, estrutura e composição da vegetação. Dois cerradões foram agrupados em termos de fertilidade do solo e de estrutura da vegetação, apresentando muitas árvores de Qualea grandiflora Mart., espécie que ocorreu associada a solos com maiores teores de fósforo. Outros dois cerradões apresentaram composição florística mais semelhante que os demais, apesar de ocorrerem em solos com diferentes níveis de fertilidade, indicando perturbação antrópica.

Sete motivações teóricas para o uso da modelagem baseada no indivíduo em ecologia

A modelagem baseada no indivíduo tem sido crescentemente empregada para analisar processos ecológicos, desenvolver e avaliar teorias, bem como para fins de manejo da vida silvestre e conservação. Os modelos baseados no indivíduo (MBI) são bastante flexíveis, permitem o uso detalhado de parâmetros com maior significado biológico, sendo portanto mais realistas do que modelos populacionais clássicos, mais presos dentro de um rígido formalismo matemático. O presente artigo apresenta e discute sete razões para a adoção dos MBI em estudos de simulação na Ecologia: (1) a inerente complexidade de sistemas ecológicos, impassíveis de uma análise matemática formal; (2) processos populacionais são fenômenos emergentes, resultando das interações entre seus elementos constituintes (indivíduos) e destes com o meio; (3) poder de predição; (4) a adoção definitiva, por parte da Ecologia, de uma visão evolutiva; (5) indivíduos são entidades discretas; (6) interações são localizadas no espaço e (7) indivíduos diferem entre si.

Successful carnivore identification with faecal DNA across a fragmented Amazonian landscape

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Using post-release monitoring data to optimize avian reintroduction programs: a 2-year case study from the Brazilian Atlantic Rainforest

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

How to not inflate population estimates? Spatial density distribution of white-lipped peccaries in a continuous Atlantic forest

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)