Introducing molaR: a New R Package for Quantitative Topographic Analysis of Teeth (and Other Topographic Surfaces)

© 2016 Springer Science+Business Media New YorkResearchers studying mammalian dentitions from functional and adaptive perspectives increasingly have moved towards using dental topography measures that can be estimated from 3D surface scans, which do not require identification of specific homologous landmarks. Here we present molaR, a new R package designed to assist researchers in calculating four commonly used topographic measures: Dirichlet Normal Energy (DNE), Relief Index (RFI), Orientation Patch Count (OPC), and Orientation Patch Count Rotated (OPCR) from surface scans of teeth, enabling a unified application of these informative new metrics. In addition to providing topographic measuring tools, molaR has complimentary plotting functions enabling highly customizable visualization of results. This article gives a detailed description of the DNE measure, walks researchers through installing, operating, and troubleshooting molaR and its functions, and gives an example of a simple comparison that measured teeth of the primates Alouatta and Pithecia in molaR and other available software packages. molaR is a free and open source software extension, which can be found at the doi:10.13140/RG.2.1.3563.4961(molaR v. 2.0) as well as on the Internet repository CRAN, which stores R packages.

Nd and Sm isotopic record from fossil fish teeth recovered from ODP Site 177-1090

Neodymium (Nd) isotopes were measured on 181 samples of fossil fish teeth recovered from Oligocene to Miocene sections at Ocean Drilling Program Site 1090 (3700 m water depth) on Agulhas Ridge in the Atlantic sector of the Southern Ocean. A long-term decreasing trend toward less radiogenic Nd isotope compositions dominates the record. This trend is interrupted by shifts toward more radiogenic compositions near the early/late Oligocene boundary and the Oligocene/Miocene boundary. Overall, epsilon-Nd values at Agulhas Ridge are more radiogenic than at other Atlantic locations, and are similar to those at Indian Ocean locations. The pattern of variability is remarkably similar to Nd isotope results from Walvis Ridge (South Atlantic) and Ninetyeast Ridge (Indian Ocean). In contrast, Agulhas Ridge and Maud Rise Nd isotope records do not show similar patterns over this interval. Results from this study indicate that deep water in the Atlantic flowed predominantly from north to south during the Oligocene and Miocene, and that export of Northern Component Water (NCW) to the Southern Ocean increased in the late Oligocene. There is also evidence for efficient exchange of deep waters between the Atlantic sector of the Southern Ocean and the Indian Ocean, although the direction of deep water flow is not entirely clear from these data. The shifts to more radiogenic Nd isotopic compositions most likely represent increases in the flux of Pacific waters through Drake Passage, and the timing of these events reflect development of a mature Antarctic Circumpolar Current (ACC). The relative timing of increased NCW export and ACC maturation support hypotheses that link deep water formation in the North Atlantic to the opening of Drake Passage.

Bacteriologic investigation of the effects of sodium hypochlorite and chlorhexidine during the endodontic treatment of teeth with apical periodontitis

SIQUEIRA JR. et al. Bacteriologic investigation of the effects of sodium hypochlorite and chlorhexidine during the endodontic treatment of teeth with apical periodontitis. Oral Surg. Oral Med. Oral Pathol. Oral Radiol. Endod., v. 104, n. 1, p. 122-130, 2007.

Preparos dentários de dentes pilares em prótese parcial removível

A perda de dentes além de afectar a mastigação e a estética, altera também o equilíbrio do sistema estomatognático, observando-se de imediato alterações na posição dos dentes adjacentes e dos dentes oponentes. Torna-se, portanto, imprescindível para a reposição da saúde oral do paciente a reabilitação com recurso a próteses fixas ou removíveis. No que diz respeito às próteses parciais removíveis (PPR´s) estas visam a substituição dos dentes perdidos, sendo facilmente removidas e inseridas pelo paciente, sem qualquer intervenção do médico dentista e, apoiam-se directamente na mucosa e nos dentes. Enquanto as PPR´s acrílicas são suportadas pela mucosa, mediante uma ampla área de contacto, as próteses esqueléticas são suportadas pelos dentes pilares através da colocação de retentores. No caso específico das PPR´s, é fundamental que o profissional de saúde tenha em consideração a importância do planeamento correcto e adequado da reabilitação oral. Para isso, pode e deve utilizar o paralelómetro, determinando assim correctamente a localização dos planos-guia, dos apoios e retentores necessários. Guiando-se por estes princípios fundamentais, qualquer reabilitação com recurso às PPR´s pode ser bem sucedida quer a nível estético quer a nível funcional.

Bacteriologic investigation of the effects of sodium hypochlorite and chlorhexidine during the endodontic treatment of teeth with apical periodontitis

SIQUEIRA JR. et al. Bacteriologic investigation of the effects of sodium hypochlorite and chlorhexidine during the endodontic treatment of teeth with apical periodontitis. Oral Surg. Oral Med. Oral Pathol. Oral Radiol. Endod., v. 104, n. 1, p. 122-130, 2007.

A importância da impressão funcional - técnica modelo modificado em prótese parcial removível de extremo livre

A Prótese Parcial Removível esquelética na reabilitação de pacientes edêntulos parciais tem sido uma opção acessível, rápida e viável de restabelecer a função estética e fonética dos dentes perdidos, porém a grande problemática em torno deste tipo de reabilitação está nos casos de extremos livres uni e bilaterais que dependem do rebordo residual para sustentação, devido à falta de pilar posterior que pode comprometer a retenção e principalmente a estabilidade da prótese que estará sujeita a deslocamentos constantes durante a dinâmica dos movimentos funcionais. Na literatura é relatado que todos os conhecimentos devem ser observados a quando da confecção deste tipo de prótese, as explicações e orientações como se comporta este tipo de prótese e os cuidados que o paciente tem que ter, e principalmente as condições biológicas dos tecidos de suporte são da responsabilidade do Médico Dentista o qual ao ter em conta e transmitir estes conhecimentos no momento do planeamento consegue assim minimizar os riscos de fracasso. A impressão funcional é de extrema importância para o sucesso da reabilitação com este tipo de prótese, mais especificamente a técnica do modelo modificado, que o objeto deste trabalho é realçar a sua utilização. Sendo de especial interesse para a Medicina Dentária pela necessidade e demanda do tratamento clínico, quanto para o ensino nas universidades. Dessa forma este trabalho visa mostrar a importância da impressão funcional na Prótese Parcial Removível esquelética de extremo livre, em especial o modelo modificado, pois ela visa obter melhor estabilidade, suporte e retenção para conseguir um melhor conforto para o paciente, mantendo a integridade do periodonto e dos dentes de apoio, obtendo assim um bom prognóstico e sucesso no procedimento realizado, como forma de fazer com que este procedimento responda tanto a expectativa do paciente como da equipe que a confecciona.

Teeth of a small durophagous crocodile from the Late Jurassic (Kimmeridgian) of North Germany

An outcrop of Late Jurassic (Kimmeridgian) age in Lower Saxony (NW Germany) has yielded small teeth probably of crocodilian origin. The dental morphology is still unknown among crocodiles and indicates a durophagous habit. The teeth are provisionally referred to as Metasuchia fam., gen. et sp. indet.

ESR dating of pleistocene mammal teeth and its implications for the biostratigraphy and geological evolution of the coastal plain, Rio Grande do Sul, southern Brazil

The fossiliferous deposits in the coastal plain of the Rio Grande do Sul State, Southern Brazil, have been known since the late XIX century; however, the biostratigraphic and chronostratigraphic context is still poorly understood. The present work describes the results of electron spin resonance (ESR) dating in eleven fossil teeth of three extinct taxa (Toxodon platensis, Stegomastodon waringi and Hippidion principale) collected along Chui Creek and nearshore continental shelf, in an attempt to assess more accurately the ages of the fossils and its deposits. This method is based upon the analysis of paramagnetic defects found in biominerals, produced by ionizing radiation emitted by radioactive elements present in the surrounding sediment and by cosmic rays. Three fossils from Chui Creek, collected from the same stratigraphic horizon, exhibit ages between (42 +/- 3) Ka and (34 +/- 7) Ka, using the Combination Uptake model for radioisotopes uptake, while a incisor of Toxodon platensis collected from a stratigraphic level below is much older. Fossils from the shelf have ages ranging from (7 +/- 1) 10(5) Ka to (18 +/- 3) Ka, indicating the mixing of fossils of different epochs. The origin of the submarine fossiliferous deposits seems to be the result of multiple reworking and redeposition cycles by sea-level changes caused by the glacial-interglacial cycles during the Quaternary. The ages indicate that the fossiliferous outcrops at Chui Creek are much younger than previously thought, and that the fossiliferous deposits from the continental shelf encompass Ensenadan to late Lujanian ages (middle to late Pleistocene). (C) 2009 Elsevier Ltd and INQUA. All rights reserved.

Impact of hypomineralized teeth and sociobehavioral aspects on caries development: a prospective cohort study

Aim: This prospective cohort study was to evaluate the independent and mutual effects of socioeconomic, oral health behaviors and individual clinical factors, including enamel hypomineralization, as possible risk factors for increase in caries experience in second primary molar (SPM) over a period of 2-years. Methods: Children (n=216) aged 4-6 years were examined for hypomineralized second primary molar (HSPM) and dental caries in school settings and were recalled every 6 months. The caregivers filled out a semi-structured questionnaire about their socio-demographic and oral health-related behaviors. Data analysis was performed using a hierarchical model with three levels. Multiple analyses were performed at each level and variables with p<0.20 were tested by stepwise multiple Generalized Estimating Equation. Results: At final examination, 33.3% of the children had developed new caries lesions in SPM. The model showed that the number of years of mother’s schooling and the caregiver´s perception about their children’s caries experience played a protective role in the incidence of dental caries. Children who had white spot lesions were more likely to develop new carious lesions in SPM. Children with HSPM showed no higher incidence of caries in their SPM than those without HSPM. Conclusions: Clinical, socioeconomic and behavioral factors impacted on caries development in primary second molars. However, further studies are required to better understand the role of HSPM in caries development in other age groups.

Influence of adhesive system on quartz fiber post dislocation resistance in endodontically treated teeth

Aim: To evaluate the dislocation resistance of the quartz fiber post/cement/dentin interface after different adhesion strategies. Methods: Forty bovine lower central incisors were selected and prepared with K-files using the step-back technique, and irrigated with 3 mL of distilled water preceding the use of each instrument. Prepared teeth were stored at 37ºC and 100% humidity for 7 days. The roots were prepared and randomized into 4 groups. The quartz fiber post was cemented with an adhesion strategy according to the following groups: GBisCem- BISCEM; GOneStep±C&B- One Step ± C&B; GAllBond±C&B- AllBond3 ± C&B; GAllBondSE±C&B- AllBondSE ±C&B with a quartz fiber post. Cross-sectional root slices of 0.7 mm were produced and stored for 24 h at 37° C before being submitted to push-out bond strength. Results: The mean and standard deviation values of dislocation resistance were GBisCem: 1.12 (± 0.23) MPa, GOneStep±C&B: 0.81 (± 0.31) MPa, GAllBond±C&B: 0.98 (± 0.14) MPa, and GAllBondSE±C&B: 1.57 (± 0.04) MPa. GAllBondSE±C&B showed significantly higher values of dislocation resistance than the other groups. Conclusions: Based on this study design, it may be concluded that adhesion strategies showed different results of quartz post dislocation resistance. Simplified adhesive system with sodium benzene sulphinate incorporation provided superior dislocation resistance.

Some surface profiles of a strip after plane-strain indentation by rigid bodies with serrated surfaces

This paper is concerned with the surface profiles of a strip after rigid bodies with serrated (saw-teeth) surfaces indent the strip and are subsequently removed. Plane-strain conditions are assumed. This has application in roughness transfer of final metal forming process. The effects of the semi-angle of the teeth, the depth of indentation and the friction on the contact surface on the profile are considered.

Does psychological stress mediate social deprivation in tooth loss?

It is unclear which theoretical dimension of psychological stress affects health status. We hypothesized that both distress and coping mediate the relationship between socio-economic position and tooth loss. Cross-sectional data from 2915 middle-aged adults evaluated retention of < 20 teeth, behaviors, psychological stress, and sociodemographic characteristics. Principal components analysis of the Perceived Stress Scale (PSS) extracted 'distress' (a = 0.85) and 'coping' (a =0.83) factors, consistent with theory. Hierarchical entry of explanatory variables into age- and sex-adjusted logistic regression models estimated odds ratios (OR) and 95% confidence intervals [95% CI] for retention of < 20 teeth. Analysis of the separate contributions of distress and coping revealed a significant main effect of coping (OR = 0.7 [95% CI = 0.7-0.8]), but no effect for distress (OR = 1.0 [95% CI = 0.9-1.1]) or for the interaction of coping and distress. Behavior and psychological stress only modestly attenuated socio-economic inequality in retention of < 20 teeth, providing evidence to support a mediating role of coping.