A New Gridding Technique for High Density Microarray Images Using Intensity Projection Profile of Best Sub Image

As the technologies for the fabrication of high quality microarray advances rapidly, quantification of microarray data becomes a major task. Gridding is the first step in the analysis of microarray images for locating the subarrays and individual spots within each subarray. For accurate gridding of high-density microarray images, in the presence of contamination and background noise, precise calculation of parameters is essential. This paper presents an accurate fully automatic gridding method for locating suarrays and individual spots using the intensity projection profile of the most suitable subimage. The method is capable of processing the image without any user intervention and does not demand any input parameters as many other commercial and academic packages. According to results obtained, the accuracy of our algorithm is between 95-100% for microarray images with coefficient of variation less than two. Experimental results show that the method is capable of gridding microarray images with irregular spots, varying surface intensity distribution and with more than 50% contamination

Asymptotics of number fields and the Cohen-Lenstra heuristics

We study the asymptotics conjecture of Malle for dihedral groups Dl of order 2l, where l is an odd prime. We prove the expected lower bound for those groups. For the upper bounds we show that there is a connection to class groups of quadratic number fields. The asymptotic behavior of those class groups is predicted by the Cohen-Lenstra heuristics. Under the assumption of this heuristic we are able to prove the expected upper bounds.

On the equivariant Tamagawa number conjecture for abelian extensions of a quadratic imaginary field

Let k be a quadratic imaginary field, p a prime which splits in k/Q and does not divide the class number hk of k. Let L denote a finite abelian extention of k and let K be a subextention of L/k. In this article we prove the p-part of the Equivariant Tamagawa Number Conjecture for the pair (h0(Spec(L)),Z[Gal(L/K)]).

Functional genomics of the Drosophila melanogaster X chromosome and the role of DWnt5 during development

The collection of X chromosome insertions (PX) lethal lines, which was isolated from a screen for essential genes on the X chromosome, was characterized by means of cloning the insertion sites, mapping the sites within genomic DNA and determination of the associated reporter gene expresssion patterns. The established STS flanking the P element insertion sites were submitted to EMBL nucleotide databases and their in situ data together with the enhancer trap expression patterns have been deposited in the FlyView database. The characterized lines are now available to be used by the scientific community for a detailed analysis of the newly established lethal gene functions. One of the isolated genes on the X chromosome was the Drosophila gene Wnt5 (DWnt5). From two independent screens, one lethal and three homozygous viable alleles were recovered, allowing the identification of two distinct functions for DWnt5 in the fly. Observations on the developing nervous system of mutant embryos suggest that DWnt5 activity affects axon projection pattern. Elevated levels of DWNT5 activity in the midline cells of the central nervous system causes improper establishment and maintenance of the axonal pathways. Our analysis of the expression and mutant phenotype indicates that DWnt5 function in a process needed for proper organization of the nervous system. A second and novel function of DWnt5 is the control of the body size by regulation of the cell number rather than affecting the size of cells. Moreover, experimentally increased DWnt5 levels in a post-mitotic region of the eye imaginal disc causes abnormal cell cycle progression, resulting in additional ommatidia in the adult eye when compared to wild type. The increased cell number and the effects on the cell cycle after exposure to high DWNT5 levels is the result of a failure to downregulate cyclin B and therefore the unsuccessful establishment of a G1 arrest.

The Degree of Word-Expansion of Lexicalized RRWW-Automata

Restarting automata can be seen as analytical variants of classical automata as well as of regulated rewriting systems. We study a measure for the degree of nondeterminism of (context-free) languages in terms of deterministic restarting automata that are (strongly) lexicalized. This measure is based on the number of auxiliary symbols (categories) used for recognizing a language as the projection of its characteristic language onto its input alphabet. This type of recognition is typical for analysis by reduction, a method used in linguistics for the creation and verification of formal descriptions of natural languages. Our main results establish a hierarchy of classes of context-free languages and two hierarchies of classes of non-context-free languages that are based on the expansion factor of a language.

The Parity of the Number of Irreducible Factors for Some Pentanomials

It is well known that Stickelberger-Swan theorem is very important for determining reducibility of polynomials over a binary field. Using this theorem it was determined the parity of the number of irreducible factors for some kinds of polynomials over a binary field, for instance, trinomials, tetranomials, self-reciprocal polynomials and so on. We discuss this problem for type II pentanomials namely x^m +x^{n+2} +x^{n+1} +x^n +1 \in\ IF_2 [x]. Such pentanomials can be used for efficient implementing multiplication in finite fields of characteristic two. Based on the computation of discriminant of these pentanomials with integer coefficients, it will be characterized the parity of the number of irreducible factors over IF_2 and be established the necessary conditions for the existence of this kind of irreducible pentanomials.

Parity of the Number of Irreducible Factors for Composite Polynomials

Various results on parity of the number of irreducible factors of given polynomials over finite fields have been obtained in the recent literature. Those are mainly based on Swan’s theorem in which discriminants of polynomials over a finite field or the integral ring Z play an important role. In this paper we consider discriminants of the composition of some polynomials over finite fields. The relation between the discriminants of composed polynomial and the original ones will be established. We apply this to obtain some results concerning the parity of the number of irreducible factors for several special polynomials over finite fields.

Influence of occupation number of single particle levels on K - K charge transfer in collisions of 90 keV - Ne{^9+} on Ne

The influence of the occupation of the single particle levels on the impact parameter dependent K - K charge transfer occuring in collisions of 90 keV Ne{^9+} on Ne was studied using coupled channel calculations. The energy eigenvalues and matrixelements for the single particle levels were taken from ab initio self consistent MO-LCAO-DIRAC-FOCK-SLATER calculations with occupation numbers corresponding to the single particle amplitudes given by the coupled channel calculations.

Algorithms for Tamagawa Number Conjectures

In dieser Arbeit werden Algorithmen zur Untersuchung der äquivarianten Tamagawazahlvermutung von Burns und Flach entwickelt. Zunächst werden Algorithmen angegeben mit denen die lokale Fundamentalklasse, die globale Fundamentalklasse und Tates kanonische Klasse berechnet werden können. Dies ermöglicht unter anderem Berechnungen in Brauergruppen von Zahlkörpererweiterungen. Anschließend werden diese Algorithmen auf die Tamagawazahlvermutung angewendet. Die Epsilonkonstantenvermutung kann dadurch für alle Galoiserweiterungen L|K bewiesen werden, bei denen L in einer Galoiserweiterung E|Q vom Grad kleiner gleich 15 eingebettet werden kann. Für die Tamagawazahlvermutung an der Stelle 1 wird ein Algorithmus angegeben, der die Vermutung für ein gegebenes Fallbeispiel L|Q numerischen verifizieren kann. Im Spezialfall, dass alle Charaktere rational oder abelsch sind, kann dieser Algorithmus die Vermutung für L|Q sogar beweisen.

Uncertainty Propagation in Model-Based Recognition

Building robust recognition systems requires a careful understanding of the effects of error in sensed features. Error in these image features results in a region of uncertainty in the possible image location of each additional model feature. We present an accurate, analytic approximation for this uncertainty region when model poses are based on matching three image and model points, for both Gaussian and bounded error in the detection of image points, and for both scaled-orthographic and perspective projection models. This result applies to objects that are fully three- dimensional, where past results considered only two-dimensional objects. Further, we introduce a linear programming algorithm to compute the uncertainty region when poses are based on any number of initial matches. Finally, we use these results to extend, from two-dimensional to three- dimensional objects, robust implementations of alignmentt interpretation- tree search, and ransformation clustering.

Behaviours implemented using a vision system based on coded light projection

In a search for new sensor systems and new methods for underwater vehicle positioning based on visual observation, this paper presents a computer vision system based on coded light projection. 3D information is taken from an underwater scene. This information is used to test obstacle avoidance behaviour. In addition, the main ideas for achieving stabilisation of the vehicle in front of an object are presented

An overview of the advantages and constraints of coded pattern projection techniques for autonomous navigation

The absolute necessity of obtaining 3D information of structured and unknown environments in autonomous navigation reduce considerably the set of sensors that can be used. The necessity to know, at each time, the position of the mobile robot with respect to the scene is indispensable. Furthermore, this information must be obtained in the least computing time. Stereo vision is an attractive and widely used method, but, it is rather limited to make fast 3D surface maps, due to the correspondence problem. The spatial and temporal correspondence among images can be alleviated using a method based on structured light. This relationship can be directly found codifying the projected light; then each imaged region of the projected pattern carries the needed information to solve the correspondence problem. We present the most significant techniques, used in recent years, concerning the coded structured light method

Analysis of the relationship between the number of citations and the quality evaluated by experts in psychology journals

Resumen tomado de la publicaci??n

Análisis de 6 objetivos de desarrollo del milenio a través de las encuestas nacionales de demografía y salud 1990-2010

Introducción: Descripción de tendencias de indicadores seleccionados de Encuestas Nacionales de Demografía y Salud (ENDS) considerados de importancia para medición del alcance de los primeros 6 objetivos de desarrollo del milenio (ODM). Metodología: Estudio descriptivo retrospectivo, análisis de 18 indicadores de salud, por disponibilidad de datos de ENDS 1990 - 2010. Análisis con estadística descriptiva datos disponibles y modelo matemático de crecimiento exponencial para determinar proyección al 2015. Resultados: ODM1, quintil de riqueza “más bajo” en el 18.4% de la población y la proyección 2015 es 19.6%, la desnutrición global ha disminuido; ODM2, porcentaje de asistencia escolar ha incrementado (2010, 94%); ODM3, ocupación mujeres en agricultura ha disminuido en últimos 20 años (2010, 4,6%) y ha incrementado actividades de mayor preparación; se mantienen los diferentes tipos de violencia contra la mujer; ODM4, desde 1995 ha disminuido la mortalidad en la niñez y aumento de cobertura en vacunación desde 2000; ODM5, atención “profesional” del parto con incremento hasta 92.7% en 2010, incremento en conocimiento de métodos anticonceptivos; ODM6 mayor uso del condón y mayores conocimientos de métodos para evitar VIH. Discusión: Avances en los ODM 2, 3, 4 y 5, que van de la mano con estrategias planteadas para el cumplimiento de los ODM, con gran impacto en disminución de la desnutrición y de la mortalidad en menores de 5 años, mejoría en la atención pre/postnatal. Algunos objetivos según las tendencias no serán alcanzados como el ODM1 cuyo indicador muestra que el número de personas en situación de pobreza podría aumentar.