cry1 genes from Bacillus thuringiensis: specificity determination and implications for primer design

Some pest management programs employ PCR to identify cry1 genes from Bacillus thuringiensis to predict bacterial toxicity towards different insect pests. However, due to changes on the mode of action of the Cry proteins, new primers had to be designed to detect the new genes. Therefore, an 'in-silico' study of genetic sequences from five cry1 subclasses was carried out and characterized by molecular tools. The design of new primers allows for more precise selection of B. thuringiensis isolates, helping to better direct the programs employing biological control.

Amicarbazone, a New Photosystem II Inhibitor

Amicarbazone is a new triazolinone herbicide with a broad spectrum of weed control. The phenotypic responses of sensitive plants exposed to amicarbazone include chlorosis, Stunted growth, tissue necrosis, and death. Its efficacy as both a foliar- and root-applied herbicide suggests that absorption and translocation of this compound is very rapid. This new herbicide is a potent inhibitor of photosynthetic electron transport, inducing chlorophyll fluorescence and interrupting oxygen evolution ostensibly via binding to the Q(B) domain of photosystem II (PSII) in a manner similar to the triazines and the triazinones classes of herbicides. As a result, its efficacy is susceptible to the most common form of resistance to PSII inhibitors. Nonetheless, amicarbazone has a good selectivity profile and is a more potent herbicide than atrazine, which enables its use at lower rates than those of traditional photosynthetic inhibitors.

Selenato e selenito na produção, nutrição mineral e biofortificação com selênio em cultivares de alface

SELENATE and SELENITE on YIELD, MINERAL NUTRITION and BIOFORTIFICATION WITH SELENIUM IN LETTUCE CULTIVARSSelenium is an important antioxidant element associated with physiological processes in plants, microorganisms, animals, and humans. However, its mode of action and essentiality in plants are still disputed. In Brazil, information on Se in agricultural crops is extremely scarce, though there are indications that low levels of Se are being consumed by the population. The objective of this study was to evaluate the effect of selenate and selenite on yield, mineral nutrition and biofortification with Se of lettuce cultivars. The experiment was arranged in a completely randomized factorial design 5 x 3 x 2, with five lettuce cultivars (Maravilha de Verao, Rafaela, Great Lakes, Veneranda, and Vera), three Se concentrations (0, 10 and 20 mu mol L(-1)) and two forms of Se (selenate and selenite), with four replicates. Results indicate that selenate application is more appropriate for biofortification of lettuce cultivars, while the effect of selenite proved to be more toxic. The application of selenate results in increased S shoot concentrations, while selenite reduced P concentrations, and both Se forms decreased micronutrient concentrations. No genotypic variation among lettuce cultivars was observed for Se concentration, and little variation was observed for shoot dry matter yield and S, Mg, Mn, and Fe levels.

The Mycobacterium tuberculosis Rv2540c DNA sequence encodes a bifunctional chorismate synthase

Background. The emergence of multi- and extensively-drug resistant Mycobacterium tuberculosis strains has created an urgent need for new agents to treat tuberculosis (TB). The enzymes of shikimate pathway are attractive targets to the development of antitubercular agents because it is essential for M. tuberculosis and is absent from humans. Chorismate synthase (CS) is the seventh enzyme of this route and catalyzes the NADH- and FMN-dependent synthesis of chorismate, a precursor of aromatic amino acids, naphthoquinones, menaquinones, and mycobactins. Although the M. tuberculosis Rv2540c (aroF) sequence has been annotated to encode a chorismate synthase, there has been no report on its correct assignment and functional characterization of its protein product. Results. In the present work, we describe DNA amplification of aroF-encoded CS from M. tuberculosis (MtCS), molecular cloning, protein expression, and purification to homogeneity. N-terminal amino acid sequencing, mass spectrometry and gel filtration chromatography were employed to determine identity, subunit molecular weight and oligomeric state in solution of homogeneous recombinant MtCS. The bifunctionality of MtCS was determined by measurements of both chorismate synthase and NADH:FMN oxidoreductase activities. The flavin reductase activity was characterized, showing the existence of a complex between FMN ox and MtCS. FMNox and NADH equilibrium binding was measured. Primary deuterium, solvent and multiple kinetic isotope effects are described and suggest distinct steps for hydride and proton transfers, with the former being more rate-limiting. Conclusion. This is the first report showing that a bacterial CS is bifunctional. Primary deuterium kinetic isotope effects show that C4-proS hydrogen is being transferred during the reduction of FMNox by NADH and that hydride transfer contributes significantly to the rate-limiting step of FMN reduction reaction. Solvent kinetic isotope effects and proton inventory results indicate that proton transfer from solvent partially limits the rate of FMN reduction and that a single proton transfer gives rise to the observed solvent isotope effect. Multiple isotope effects suggest a stepwise mechanism for the reduction of FMNox. The results on enzyme kinetics described here provide evidence for the mode of action of MtCS and should thus pave the way for the rational design of antitubercular agents. © 2008 Ely et al; licensee BioMed Central Ltd.

EIF5A dimerizes not only in vitro but also in vivo and its molecular envelope is similar to the EF-P monomer

The protein eukaryotic initiation factor 5A (eIF5A) is highly conserved among archaea and eukaryotes, but not in bacteria. Bacteria have the elongation factor P (EF-P), which is structurally and functionally related to eIF5A. eIF5A is essential for cell viability and the only protein known to contain the amino acid residue hypusine, formed by post-translational modification of a specific lysine residue. Although eIF5A was initially identified as a translation initiation factor, recent studies strongly support a function for eIF5A in the elongation step of translation. However, the mode of action of eIF5A is still unknown. Here, we analyzed the oligomeric state of yeast eIF5A. First, by using size-exclusion chromatography, we showed that this protein exists as a dimer in vitro, independent of the hypusine residue or electrostatic interactions. Protein-protein interaction assays demonstrated that eIF5A can form oligomers in vitro and in vivo, in an RNA-dependent manner, but independent of the hypusine residue or the ribosome. Finally, small-angle X-ray scattering (SAXS) experiments confirmed that eIF5A behaves as a stable dimer in solution. Moreover, the molecular envelope determined from the SAXS data shows that the eIF5A dimer is L-shaped and superimposable on the tRNAPhe tertiary structure, analogously to the EF-P monomer. © 2012 Springer-Verlag.

Efeitos fisiológicos da piraclostrobina em plantas de feijão (Phaseolus vulgaris L.) condicionado sob diferentes tensões de água no solo

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Efeito de genótipos de soja e de flavonóides na biologia e no intestino médio de Anticarsia gemmatalis

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Avaliação do potencial cancerígeno do Diuron [3-(3,4-Diclorofenil)-1,1-Dimetiluréia] no modelo de iniciação-promoção cutânea em camundongos swiss

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Estudo dose-resposta do herbicida diuron[3-(3,4-diclorofenil)-1,1-dimetiluréia] no epitélio da bexiga de ratos Wistar machos

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Resíduos em frutos e atividade do acaricida etoxazole sobre o ácaro-da-leprose, Brevipalpus phoenicis (Geijskes, 1939) (Acari: tenuipalpidae), em citros

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Toxicidade de produtos sintetizados a partir de extratos de plantas e do bistrifluron para o cupim subterrâneo Coptotermes gestroi (Wasmann, 1896) (Isoptera; Rhinotermitidae)

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Estudos da enantio- e estéreo-especificidade da SADH de Thermoanaerobacter ethanolicus 39E: mutagênese, expressão, purificação, cristalização e estudos cristalográficos

Pós-graduação em Biofísica Molecular - IBILCE

Avaliação dos efeitos citotóxicos, genotóxicos e mutagênicos de 2 classes de agrotóxicos utilizados em cultura de cana-de-açúcar no Estado de São Paulo-Brasil

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Interações das proteínas Cry1Ia10 e Vip3Aa de Bacillus thuringiensis e toxicidade para larvas de Spodoptera spp. (Lepidoptera: Noctuidae)

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Mecanismos de ação da própolis na modulação de danos quimicamente induzidos no DNA

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)