Optimised dose titration for Duodopatreatment based on simulation experiments– implementation in a decision supportsystem

The aim of this work was to design a set of rules for levodopa infusion dose adjustment in Parkinson’s disease based on a simulation experiments. Using this simulator, optimal infusions dose in different conditions were calculated. There are seven conditions (-3 to +3)appearing in a rating scale for Parkinson’s disease patients. By finding mean of the differences between conditions and optimal dose, two sets of rules were designed. The set of rules was optimized by several testing. Usefulness for optimizing the titration procedure of new infusion patients based on rule-based reasoning was investigated. Results show that both of the number of the steps and the errors for finding optimal dose was shorten by new rules. At last, the dose predicted with new rules well on each single occasion of majority of patients in simulation experiments.

Modelling Recreation Demand Using Choice Experiments : Using Swedish Snowmobilers Demand for Groomed trails

This paper is concerned with the use of the choice experiment method for modeling the demand for snowmobiling . The Choice Experiment includes five attributes, standard, composition, length, price day card and experience along trail. The paper estimates the snowmobile owners’ preferences and the most preferred attributes, including their will-ingness to pay for a daytrip on groomed snowmobile trail. The data consists of the an-swers from 479 registered snowmobile owners, who answered two hypothetical choice questions each. Estimating using the multinominal logit model, it is found that snow-mobilers on average are willing to pay 22.5 SEK for one day of snowmobiling on a trail with quality described as skidded every 14th day. Furthermore, it is found that the WTP increases with the quality of trail grooming. The result of this paper can be used as a yardstick for snowmobile clubs wanting to develop their trail net worth, organizations and companies developing snowmobiling as a recreational activities and marketers in-terested in marketing snowmobiling as recreational activities.

Connecting Scientific Data to Scientific Experiments with Provenance

As scientific workflows and the data they operate on, grow in size and complexity, the task of defining how those workflows should execute (which resources to use, where the resources must be in readiness for processing etc.) becomes proportionally more difficult. While "workflow compilers", such as Pegasus, reduce this burden, a further problem arises: since specifying details of execution is now automatic, a workflow's results are harder to interpret, as they are partly due to specifics of execution. By automating steps between the experiment design and its results, we lose the connection between them, hindering interpretation of results. To reconnect the scientific data with the original experiment, we argue that scientists should have access to the full provenance of their data, including not only parameters, inputs and intermediary data, but also the abstract experiment, refined into a concrete execution by the "workflow compiler". In this paper, we describe preliminary work on adapting Pegasus to capture the process of workflow refinement in the PASOA provenance system.

The Requirements of Using Provenance in e-Science Experiments

In e-Science experiments, it is vital to record the experimental process for later use such as in interpreting results, verifying that the correct process took place or tracing where data came from. The process that led to some data is called the provenance of that data, and a provenance architecture is the software architecture for a system that will provide the necessary functionality to record, store and use process documentation. However, there has been little principled analysis of what is actually required of a provenance architecture, so it is impossible to determine the functionality they would ideally support. In this paper, we present use cases for a provenance architecture from current experiments in biology, chemistry, physics and computer science, and analyse the use cases to determine the technical requirements of a generic, technology and application-independent architecture. We propose an architecture that meets these requirements and evaluate a preliminary implementation by attempting to realise two of the use cases.

Provenance-based Validation of E-Science Experiments

E-Science experiments typically involve many distributed services maintained by different organisations. After an experiment has been executed, it is useful for a scientist to verify that the execution was performed correctly or is compatible with some existing experimental criteria or standards, not necessarily anticipated prior to execution. Scientists may also want to review and verify experiments performed by their colleagues. There are no existing frameworks for validating such experiments in today's e-Science systems. Users therefore have to rely on error checking performed by the services, or adopt other ad hoc methods. This paper introduces a platform-independent framework for validating workflow executions. The validation relies on reasoning over the documented provenance of experiment results and semantic descriptions of services advertised in a registry. This validation process ensures experiments are performed correctly, and thus results generated are meaningful. The framework is tested in a bioinformatics application that performs protein compressibility analysis.

Provenance: The Bridge Between Experiments and Data

Current scientific applications are often structured as workflows and rely on workflow systems to compile abstract experiment designs into enactable workflows that utilise the best available resources. The automation of this step and of the workflow enactment, hides the details of how results have been produced. Knowing how compilation and enactment occurred allows results to be reconnected with the experiment design. We investigate how provenance helps scientists to connect their results with the actual execution that took place, their original experiment and its inputs and parameters.

An Injection-locked Diode Laser for Cold Rydberg Atom Experiments

A free-running, temperature stabilized diode laser has been injection-locked to an external cavity diode laser for use in cold Rydberg atom experiments. Cold rubidium atoms in a magneto-optical trap (MOT) are excited to Rydberg states using a 10 ns laser pulse. The Rydberg atoms spontaneously ionize due to dipole forces, and the collisional ionization dynamics are observed as a function of atom density and principal quantum number of the Rydberg state, n. The injection-locked diode laser will be used as a repumper in conjunction with a dark spontaneous-force optical trap (SPOT) to increase the Rydberg state density. We report on the design of the injection-locked laser system.

Biologia reprodutiva de duas espécies do gênero Bryconamericus (Characidae: Tetragonopterinae) dos sistemas dos Rios Jacuí e Uruguai, RS

Neste trabalho são abordados aspectos da biologia reprodutiva como o período reprodutivo, fecundidade e presença de caracteres sexuais secundários de duas espécies do gênero Bryconamericus, que são tetragonopteríneos pertencentes à família Characidae. O gênero distribui-se desde a Costa Rica até o Oeste da Argentina por uma variedade de ecossistemas de água doce. Foram feitas coletas mensais nos rios Vacacaí e Ibicuí no Rio Grande do sul, entre abril de 2001 e março de 2002, utilizando redes do tipo picaré. Os animais capturados foram fixados em formol 10% e, em laboratório, foram medidos, pesados, separados por sexo e dissecados para a retirada e pesagem de gônadas, estômago e fígado. A partir destes dados, foram calculados os índices gonadossomático, de repleção estomacal e hepatossomático. As gônadas foram identificadas macro e microscopicamente quanto ao estádio de maturação. O período reprodutivo de B. iheringii compreende os meses de setembro e outubro e o de B. stramineus, os meses de outubro, novembro e fevereiro. O teste de correlação não paramétrico de Spearman não demonstrou significância entre as médias de IGS das duas espécies e os fatores bióticos e abióticos, com exceção dos valores de IGS de machos de B. stramineus e os valores do fotoperíodo, que mostraram haver correlação A fecundidade absoluta, estimada a partir da contagem total dos ovócitos vitelinados teve uma média de 933,71 ovócitos para B. iheringii e de 371,3 ovócitos para B. stramineus. A fecundidade relativa média para B. iheringi foi de 0,36 ovócitos por mg de peso total e para B. stramineus foi de 0,35. Os caracteres sexuais secundários analisados foram a presença de ganchos nas nadadeiras pélvicas e anal dos machos, cuja presença e freqüência foi estimada de acordo com os diferentes estádios de maturação gonadal, com o mês analisado e por classes de comprimento padrão. Em ambas espécies observa se maior incidência de ganchos desenvolvidos em machos no estádio em maturação e de ganchos bem desenvolvidos em machos maduros. A análise mensal mostra um predomínio de ganchos bem desenvolvidos nos meses correspondentes ao período reprodutivo, para ambas as espécies. De acordo com as classes de comprimento, ganchos bem desenvolvidos foram encontrados sempre nos indivíduos maiores. Durante a pesquisa foi observada também, a presença de uma glândula na região anterior do primeiro arco branquial, outro caracter sexual secundário, que está sendo registrado pela primeira vez para essas duas espécies.