Temperature and photoperiod effects on sex determination in Leuresthes tenuis (fish)

In some gonochoristic species, sex is influenced not only by genotype at conception but also by the environment that offspring experience during early ontogeny (termed environmental sex determination or ESD). ESD is thought to be adaptive when seasonal variations in environmental conditions provide a sex-specific fitness advantage. In vertebrates, temperature is the most common determinant of sex, and seasonal variation in temperature serves as a temporal cue of environmental quality such as length of the growing season. Some environments, however, lack strong seasonal temperature fluctuations and other cues, particularly photoperiod, may provide a more reliable indicator of the environment offspring enter. We tested this hypothesis by rearing the offspring of the California grunion (Leuresthes tenuis, Ayres), which experiences low seasonal temperature variation in nature, under common garden conditions at three temperature and two photoperiod treatments. Our experiments revealed that both temperature and photoperiod significantly affected sex ratios in L. tenuis. More females were produced at cooler temperatures and longer day lengths, which is consistent with female biased sex ratios early in the breeding season, and likely adaptive through increased female size and fecundity. To our knowledge, this is the first documented case of photoperiod-dependent sex determination in a gonochoristic vertebrate.

Concentrations of rare earth elements in pore waters of IODP Holes 323-U1345A and 323-U1345B

We studied the diagenetic behavior of rare earth elements (REEs) in a highly productive passive margin setting of the Bering Sea Slope. Site U1345 was drilled during the Integrated Ocean Drilling Program Expedition 323 at a water depth of 1008 m currently in the center of an oxygen minimum zone. Pore water concentrations of fourteen REEs were determined down to ~ 140 meters below the seafloor (mbsf). The REE concentrations were higher in the pore water than the deep seawater, indicating that there was significant liberation from the sediments during diagenesis. There was a major peak at ~ 10 mbsf that was more pronounced for the heavy REE (HREE); this peak occurred below the sulfate-methane transition zone (6.3 mbsf) and coincided with high concentrations of dissolved iron and manganese. At ~ 2 mbsf, there was a minor peak in REE and Mn contents. Below ~ 40 mbsf, the REE concentration profiles remained constant. The Ce anomaly was insignificant and relatively constant (PAAS-normalized Ce/Ce = 1.1 ± 0.2) throughout the depth profile, showing that the Ce depleted in seawater was restored in the pore water. HREE-enrichment was observed over the entire 140 m except for the upper ~ 1 m, where a middle REE (MREE)-bulge was apparent. REE release in shallow depths (2-4 mbsf) is attributed to the release of light REEs (LREEs) and MREEs during the organoclastic reduction of Mn oxides in anoxic sediments. The high HREE concentrations observed at ~ 10 mbsf can be attributed to the reduction of Fe and Mn minerals tied to anaerobic oxidation of methane or, less significantly, to ferromagnesian silicate mineral weathering. The upward diffusion flux across the sediment-water interface was between 3 (for Tm) and 290 (for Ce) pmol/m**2/y.

Determinación del contenido de alúmina reactiva de las adiciones puzolánicas naturales y artificiales, por termogravimetría y por el método de Rietveld

Tanto el tema de esta investigación, como sus objetivos, fundamentos, materiales seleccionados y parte experimental para alcanzarlos, han sido promovidos por la situación y el estado de las construcciones de hormigón armado que se comenzaron a realizar en España a partir del año 1975, con hormigones y morteros de cemento que contenían cenizas volantes hasta un 20 %, en principio, y hasta un 35 %, más tarde, de su dosificación de cemento Portland (CP), los cuales y en contra de lo esperado, han demandado y continúan demandando, muy a pesar de sus aparentes bondades de todo tipo que se les atribuían, una necesidad de mejora de sus prestaciones, especialmente, debido a un nivel inesperadamente bajo de la durabilidad de algunas obras construidas con los mismos. Todo era debido, en definitiva, a que las adiciones puzolánicas, naturales y artificiales, tales como las cenizas volantes, referidas antes, se vienen utilizando reglamentariamente para la fabricación de cementos y/o de sus productos derivados, hormigones, morteros y pastas, en la mayor parte de los países industrializados, desde hace ya más de tres décadas aproximadamente, en las mismas condiciones e idénticos usos constructivos que los hormigones y morteros de CP puro, viniendo además, dictada dicha utilización de estos materiales residuales, hoy sub-productos industriales, por cuestiones medioambientales y/o económicas, principalmente, motivo por el cual esta Tesis Doctoral ha pretendido responder también, adecuadamente y de manera esquemática (en forma de diagrama de flujo), a los criterios que deben de tenerse en cuenta a la hora de su selección y caracterización normalizada y reglamentada de estas adiciones minerales activas, sobre todo, antes de su dosificación y uso en forma del denominado cemento Portland con puzolana, o con ceniza volante, o con esquistos calcinados o con puzolanas calcinadas o con humo de sílice, cemento Portland mixto, cemento puzolánico o cemento compuesto, para que dichos problemas no se le produzcan al hormigón armado ni en masa. De aquí el enfoque tan particular y especial de esta investigación, al haberla circunscrito únicamente a las puzolanas naturales y artificiales, por considerarlas todas ellas, independientemente de por su origen, como materiales constituidos por pequeñas fracciones cristalinas distribuidas aleatoriamente en una matriz mayoritariamente vítrea y/o amorfa, la cual es la que le confiere su reactividad con el hidróxido de calcio en forma de cal apagada o de portlandita procedente de la hidratación del CP. A su vez, dichas fracciones vítreas y/o amorfas están constituidas, en su mayor parte, por sílice reactiva, SiO2r-, alúmina reactiva, Al2O3r-, y óxido de hierro reactivo, Fe2O3r-, recibiendo además, en conjunto, el nombre específico de "factores hidráulicos" de la puzolana, los cuales, por lo común, difieren cuantitativamente de sus contenidos totales, determinados por fusión alcalina mediante procedimientos normalizados. De los tres óxidos reactivos mencionados y desde el punto de vista técnico, los más importantes por su mayor presencia en casi todas las puzolanas naturales y artificiales y, también, transcendencia en la durabilidad química que les pueden llegar a conferir al hormigón armado y en masa, mortero o pasta de cemento que las contenga, son la SiO2r- y la Al2O3r-. El primero de los dos, la SiO2r-, reacciona nada más que con la portlandita (y el Ca(OH)2) para formar geles C-S-H, más tarde transformados en tobermoritas o en jennitas, semejantes a los que originan la alita y la belita del CP en su hidratación. Y desde el punto de vista normativo, la presencia de esta fracción silícica reactiva en las puzolanas viene regulada por la norma EN 197-1, de modo general, siendo además referida por la norma EN 450-1:2006, en el contexto de las cenizas volantes en su adición al hormigón, como "un polvo fino de partículas principalmente de forma esférica y cristalina, procedentes de la combustión de carbón pulverizado, que tiene propiedades puzolánicas y que está compuesto fundamentalmente de SiO2 y Al2O3". Además y de acuerdo con la primera de las dos normas, "El contenido de dióxido de silicio reactivo (definido y determinado según la norma EN 196-2 o su equivalente la UNE 80225) no debe ser inferior al 25 % en masa". Por su parte, cuantiosos estudios experimentales realizados por Talero solo y con otros investigadores, han demostrado que si la puzolana no es adecuada en calidad ni en cantidad, la durabilidad del cemento del que forme parte, y, por consiguiente, de los productos derivados que con él se fabriquen, hormigones, morteros, pastas y prefabricados, puede llegar a ser anormalmente baja, porque la alúmina reactiva, Al2O3r-, o alúmina tetra- o penta-coordinada que la constituye, se implica como tal, de una forma muy directa y con resultados totalmente contrapuestos incluso, en los ataques químicos agresivos naturales que se les producen, provenientes de terrenos y aguas selenitosas (sulfatos, que atacan en su caso al propio material hormigón, mortero y pasta que la contiene para formar ettringita de rápida formación, ett-rf, la cual puede llegar incluso a provocar un ataque rápido del yeso), del rocío marino y de las sales de deshielo (cloruros, que atacan, en cambio, a las armaduras de acero del hormigón provocándoles su corrosión electroquímica por "picadura", si bien, en este otro ataque químico, dicha Al2O3r- lo que origina es sal de Friedel de rápida formación, sF-rf, también, cuyo efecto es, en cambio, colmatador y protector, en definitiva, de dicha corrosión electroquímica), del agua de mar (acción agresiva mutua de cloruros y sulfatos), de la carbonatación, de la reactividad árido-álcali, además de intervenir en la liberación del calor de hidratación, así como también, en el comportamiento reológico de sus pastas, etc., acortándoles de este modo su durabilidad prevista y, en ocasiones, muy seriamente incluso. Pero lo más paradójico de todo es, que a pesar de su referido comportamiento totalmente contrapuesto, frente a sulfatos y cloruros, - aún no se dispone de un método de análisis químico para su determinación cuantitativa, que sea además relativamente sencillo en su operatividad, veraz, preciso, de respuesta rápida, desde el punto de vista técnico de la construcción (no más de 28 días), repetible, reproducible, que no implique peligro alguno para la seguridad vital de las personas que lo tengan que manipular y poner en práctica, económico, y que sirva también tanto para investigación -vertiente científica-, como, sobre todo, para control de calidad -vertiente técnica-, - y ni mucho menos tampoco se dispone todavía, de especificación química alguna que precise el contenido máximo de Al2O3r- (%) que tiene que poseer una puzolana natural o artificial, para poder ser añadida al cemento Portland y/o al hormigón que va a estar sometido a un determinado ataque químico agresivo de los mencionados antes, y, en especial, a sulfatos, a cloruros o al agua de mar. Y para mayor justificación de ambas necesidades, se ha de decir también que la vigente Instrucción de Hormigón Estructural EHE-08 no contempla tampoco especificación química alguna sobre los "factores hidráulicos", en general, ni del contenido de Al2O3r-(%) de las cenizas volantes, muy en particular, en su Artículo 30º "Adiciones", ni en ningún otro Artículo, a pesar de que sí contempla, en cambio, - otras especificaciones químicas que carecen del necesario significado en cuanto a la necesidad de llevar explícita o implícitamente, el mensaje de la Durabilidad Química deseado, y - el Artículo 37º, el cual y para mayor abundamiento se titula paradójicamente "Durabilidad del hormigón y de las armaduras". Asimismo, tampoco se contempla en la última versión que acaba de publicarse de la norma EN 197-1 titulada: "Cementos. Parte 1: Composición, especificaciones y criterios de conformidad de los cementos comunes". Ni tampoco, en la norma EN 450-1:2006 titulada "Cenizas volantes para hormigón. Parte 1: Definiciones, especificaciones y criterios de conformidad", ni en la vigente Instrucción española para la Recepción de Cementos, RC-08, ni en la norma ASTM C618-03 tampoco. La única especificación química que ambas normas, la europea y la norteamericana, refieren es aquella que dice que la suma de los contenidos porcentuales de SiO2 total, Al2O3 total y Fe2O3 total, de la puzolana natural o artificial, ha de ser mayor o igual que 70 %, definiendo, además, a las puzolanas de este modo tan genérico: "materiales silíceos o silíceos y aluminosos, que por sí mismos no poseen valor cementante alguno, pero que finamente divididos y en presencia de humedad, reaccionarán químicamente con hidróxido de calcio a temperaturas ordinarias para formar compuestos que poseen propiedades cementantes". Por consiguiente y de acuerdo con todo lo anterior, el objetivo primordial de esta Tesis Doctoral ha sido: Diseñar y poner a punto un nuevo método analítico de utilidad técnica (que la duración máxima del ensayo no sea mayor de 28 días), para determinar el contenido de alúmina reactiva, vítrea o amorfa, Al2O3r-, de las puzolanas naturales y artificiales. Y una vez puesto a punto, validarlo a nivel de su repetibilidad, de acuerdo con parámetros estadísticos apropiados, poniendo especial énfasis en los criterios de aceptación establecidos por la American Association of Official Analytical Chemists (AOAC). Y para conseguirlo, la innovación de esta investigación se ha basado en los siguientes fundamentos generales, a saber: - Toda la alúmina de cualquier puzolana natural o artificial, capaz de ser atacada, disuelta y lixiviada en 28 días, por la portlandita o por el hidróxido de calcio, Ca(OH)2, en medio acuoso, es considerada como alúmina reactiva, Al2O3r-. - Dicha fracción alumínica reactiva de la puzolana natural o artificial se tiene que encontrar, además, en el estado físico-químico de poder reaccionar químicamente también, en presencia de hidróxido de calcio, cloruro de sodio y agua, para originar monocloro¿aluminato de calcio hidratado, C3A·CaCl2·10H2O, o sal de Friedel. Además, dicho estado físico-químico de la puzolana ha de ser acorde con la definición de alúmina reactiva adoptada en esta investigación en razón de las prestaciones reales de durabilidad química que le puede llegar a conferir a los cementos de mezcla y a sus productos derivados, hormigones, morteros y pastas, que se fabriquen con la misma. - La originalidad de este nuevo método analítico, respecto a los demás métodos ya existentes, reside en que la cuantificación de dicha fracción alumínica reactiva de la puzolana natural o artificial, se realiza mediante cálculo estequiométrico, basándose, para ello, en dicha reacción química de formación de sal de Friedel precisamente, tras 28 días de hidratación básica-salina acelerada de la puzolana natural o artificial, habiéndose realizado, además, en esta investigación dicha determinación cuantitativa de la cantidad de sal de Friedel originada por cada puzolana, mediante dos técnicas analíticas instrumentales que fueron las siguientes: el análisis termogravimétrico (variante I ó I-I en su caso) y el método de Rietveld con la difracción de Rayos X en polvo (variante II). - La reacción química de formación de sal de Friedel tras 28 días de hidratación básica-salina acelerada de las puzolanas que se analicen, se optimizó para asegurar que el único compuesto químico de aluminio y cloro formado fuese sal de Friedel nada más (dosificando para ello en cantidad adecuada los reactivos químicos necesarios: Ca(OH)2, NaCl y agua destilada), manteniendo, además y por otra parte, el compromiso apropiado entre el máximo rendimiento de dicha reacción química (ataque, disolución y lixiviación en 28 días, de toda la alúmina reactiva de la puzolana) y el modo y medios más adecuados de acelerarlo para conseguirlo fue a 40°C de temperatura, con agitación constante y cierre hermético del reactor. - La aplicabilidad y selectividad del nuevo método analítico, objeto de esta Tesis Doctoral, fue estudiada con una serie de puzolanas naturales y artificiales españolas, silíceas y/o silíceas y aluminosas en naturaleza, que fueron las siguientes: M0 (metacaolín 0), M1 (M0 con 50 % de cuarzo), C y L (puzolanas naturales de las Islas Canarias), CV10 y CV17 (cenizas volantes), A (puzolana natural de Almagro), O (puzolana natural de Olot) y HS (humo de sílice). - Todas las adiciones minerales anteriores cumplieron con los principales requisitos físicos y químicos que son preceptivos para poder considerarlas, antes de todo, como puzolanas, lo que era indispensable y de obligado cumplimiento, para poderles determinar su contenido total de Al2O3r- (%) mediante el nuevo método analítico. Estos condicionantes fueron los siguientes: grado adecuado de finura de molido o tamaño medio de partícula (según la norma EN 451-2), haber sido analizadas químicamente antes de todo (según la norma EN 196-2 ó la ASTM C311), con el fin de determinarles especialmente, sus contenidos totales de SiO2 (%), Al2O3 (%) y Fe2O3 (%), haberles determinado, además, su contenido de sílice reactiva, SiO2r- (%) (según la norma UNE 80225), y haber cumplido con el ensayo de puzolanicidad o de Frattini (según la norma EN 196-5) a la edad de 28 días al menos. Este último requisito, otrora de obligado cumplimiento hasta el año 1988, para cualquier puzolana natural y artificial que una fábrica de cementos pretendiera introducir en el proceso de fabricación de un nuevo cemento puzolánico o cemento tipo CEM IV, ha logrado así, que se tenga que volver utilizar de nuevo de forma obligada con esta Tesis Doctoral. Y los resultados obtenidos con el nuevo método analítico de los contenidos de Al2O3r-(%) de las puzolanas seleccionadas, fueron los siguientes: - Mediante su variante I: M0 29.9 %, M1 16.9 %, CV10 11.4 %, L 12.3 %, C 12.6 %, A 8.0 %, CV17 9.5 % y O 6.3 % de Al2O3r-, y - Mediante su variante II: M0 30.7 %, M1 15.4 %, CV10 14.7%, L 11.8 %, C 11.1 %, A 8.9 %, CV17 9.6 % y O 6.8 % de Al2O3r-. Finalmente, todos ellos fueron contrastados, además, mediante la calibración y validación del nuevo método analítico, con los valores de referencia obtenidos de esas mismas puzolanas, los cuales se les habían determinado mediante el método de Florentín, consistente en atacar, disolver y lixiviar también toda la fracción alumínica soluble de la puzolana (y además, aquella silícica y férrica que la constituyen a la par), pero, en especial, su contenido total de alúmina reactiva, mediante un ataque básico (con Ca(OH)2 en medio acuoso a temperatura del laboratorio, habiendo sido, además, su duración hasta 1 año), seguido de otro ácido (con HCl, d = 1.12), habiéndose obtenido esta vez los siguientes resultados de sus contenidos de Al2O3r- (%): M0 28.8 %, M1 16.7 %, CV10 9.7 %, L 11.2 %, C 12.2 %, A 13.0 %, CV17 10.6 % y O 9.5 %. Dicha validación realizada ha puesto de manifiesto, en términos generales, que el nuevo método analítico es más fidedigno que el de Florentín, por lo que resulta ser totalmente apropiado para obtener los resultados que se han pretendido, además de proporcionarlos en un espacio de tiempo relativamente corto (28 días a lo sumo) y a un coste económico razonable por no elevado (salvo error u omisión y libre de impuestos directos e indirectos, el coste económico estimado de la variante I estaría en torno a 800.00 - 900.00 €/puzolana -caso más probable-, y aproximadamente una tercera parte nada más, en el caso de que la edad máxima del ensayo acelerado sea 7 días nada más -caso menos probable-), y, por consiguiente, técnicamente aceptable, al cumplir, además, en todo el rango considerado de variabilidad posible de concentraciones o contenidos del analito buscado en la puzolana, con tales parámetros de validación como son: linealidad (los resultados obtenidos son directamente proporcionales a la señal-respuesta instrumental recibida), sensibilidad, precisión excelente, repetibilidad satisfactoria de los valores obtenidos de los contenidos de Al2O3r- de todas y cada una de las adiciones puzolánicas seleccionadas, confirmando, por ello, la universalidad de su uso. Finalmente, las ventajas del nuevo método analítico, respecto a los métodos ya existentes recopilados de la bibliografía (el método de Florentín, el método de López Ruiz -HF 40 % y HNO3 2N-, el método de Murat y Driouche para arcillas -HF 0.5M-, el método de Arjuan, Silbee y Roy para cenizas volantes -HF 1 %- y su modificación por Fernández-Jiménez y cols. -HF 1 %, 27Al NMR MAS y XRD (método de Rietveld)-, y el método de determinación de la relación SiO2r-/Al2O3r- para arcillas y cenizas volantes por Ruiz-Santaquiteria y cols. -HF 1 %, NaOH 8M y ICP-AES-) son, principalmente, estar exento de peligro alguno para la seguridad vital de las personas que lo tengan que manipular y poner en práctica, ser bastante apropiado para control de calidad además de para investigación, su considerable menor coste económico, su relativamente corto espacio de tiempo que se necesita para obtener la respuesta-resultado pretendida (28 días a lo sumo), así como su universalidad y selectividad, puesto que además, su aplicabilidad es para todo tipo de adiciones puzolánicas naturales o artificiales, como así lo demuestran los resultados obtenidos de los materiales puzolánicos naturales y artificiales seleccionados y analizados, en un rango de concentraciones del analito -contenido de alúmina reactiva, Al2O3r- (%)-, desde el 5 % hasta el 30 % en masa, rango éste que, por otra parte, comprende prácticamente TODAS las adiciones puzolanas naturales y artificiales existentes en el mercado transnacional y las aún por existir. Por consiguiente y de acuerdo con lo anterior, el nuevo método analítico, ya sea realizado mediante su variante I o la II, debido, - en primer lugar, a los fundamentados planteamientos relativos a su procedimiento experimental -modus operandi- el cual ha sido aplicado a una amplia gama de puzolanas naturales y artificiales, y - en segundo lugar, debido a la calidad de los resultados obtenidos con un grado de precisión y repetibilidad excelentes, ha demostrado poseer una gran utilidad científica -para investigación-, pero, sobre todo, técnica -para control de calidad de adiciones puzolánicas naturales y artificiales que se adicionan habitualmente al cemento Portland en fábrica y/o a sus hormigones y morteros en planta-, además de ser representativos los valores obtenidos mediante el mismo respecto a la más que probable durabilidad química que cada una de ellas puede llegarle a conferir al hormigón armado y en masa, mortero y pasta del que forme parte, así como también su cantidad adecuada de sustitución parcial de cada cemento Portland para conseguirla, acorde con sus propias prestaciones químico-físicas o físico-químicas que puede llegarle a conferir, según sea su carácter químico (alumínico, alumínico-silícico, silícico-alumínico, silícico-férrico-alumínico o silícico), forma y tamaño medio de su partícula. Por último, el nuevo método analítico ha demostrado cumplir además, con todos los requisitos de obligado cumplimiento que establece la norma ISO/IEC 17025 sobre la calidad y fiabilidad de nuevos métodos o procedimientos analíticos no normalizados todavía, para poder ser propuesto en un futuro próximo, ante la Comisión de AENOR correspondiente, con objeto de comenzar un expediente para su certificación y normalización. ________________________________________________________________________________ Both the subject of this research, its objectives, fundamentals, materials selected and experimental part to achieve, have all been promoted by the situation and the state of reinforced concrete constructions that began performing in Spain from 1975, with concrete and mortars cement containing fly ash up to 20 %, in principle, and later, up to 35 % to its content of Portland cement, which and against expected, demanded a need to improve their performance, especially due to an unexpectedly low level of durability of some works built with them, despite, however, its apparent benefits of all kinds are ascribed to them. Ultimately, the natural or artificial pozzolanic additions, such as fly ash specially, referred to above, have been used with regulation to manufacture cements and/or its derivatives, concretes, mortars, cement pastes, in the most industrialized countries. More than three decades ago, under the same conditions and identical construction mainly uses concretes and mortars plain Portland cement, besides coming, given that use of these waste materials, industrial by-products today for environmental and/or economic issues. For this reason, this Doctoral Thesis aims to answer properly and schematically (in the form of flow chart), the criteria to be taken into account when selection and characterization standardized for these active mineral additions, especially prior to choosing and use in the so-called Portland Cement (PC) pozzolan, or with fly ash or with calcined shales or with calcined pozzolans or with silica fume or PC mixed or pozzolanic cement or compound cement, for that such pathology problems will not occur when reinforced concretes nor mass concretes are used for building. Hence the very particular and special focus about this research, having confined only to the natural or artificial pozzolans, considering them all, regardless of their origin, approach as materials consisting of small crystalline fractions randomly distributed in a largely vitreous and/or amorphous matrix, which confers their reactivity with calcium hydroxide in the form of slaked lime or portlandite from PC. In turn, these vitreous and/or amorphous fractions consist in its greater part, by reactive silica, SiO2r-, reactive alumina, Al2O3r-, and reactive iron oxide, Fe2O3r-, which also receive, in conjunction, the specific name of "hydraulic factors" of the pozzolan. Usually, they all differs in quantity of their respective total contents of the SiO2 (%), Al2O3 (%) and Fe2O3 (%) determined the pozzolan by alkaline fusion by means of standard procedures. Of the three above-mentioned oxides reagents and from the technical point of view, the most important for its increased presence in every one of the natural or artificial pozzolans and also significance in the chemical durability that can get them to give the concrete mortar or cement paste which contain them, are SiO2r- and Al2O3r-. From the first two, the SiO2r- reacts with portlandite only, released in the hydration of the PC (and with Ca(OH)2), to form C-S-H gels, transformed in tobermorites or jennites later on, similar to C-S-H gels also originating from the alite and belite hydration in the CP. From the standardization criteria point of view, the presence of this silicic fraction in pozzolans is regulated at first, by the European standard EN 197-1, in general, also being referred by the EN 450-1:2006, in the context of the fly ash in addition to the concrete, as a "fine powder of spherical particles mainly crystalline form. It is from the combustion of pulverized coal, which have pozzolanic properties and is mainly composed of SiO2 and Al2O3". In addition and according to the EN 197-1 standard, the reactive silica content (which can be defined and determined in accordance with EN 197-1 standard or its UNE 80225 standard) must not be lower than 25 % of its mass. Meanwhile, considerable experimental studies by Talero and Talero et al, have shown that if the pozzolan is not adequate in quality nor quantity, the durability of cement that is part and, therefore, of its derivative products, concretes, mortars and pastes cement, can become abnormally low because its reactive alumina, Al2O3r- (%), content or tetra- or penta-coordinated alumina which involves itself in a very direct and totally mixed and conflicting results even at all aggressive chemical attack natural to produce to the concrete, mortar and paste with inadequate natural and/or artificial pozzolans, such as those from the selenitous land and waters (sulfates, strikes if the material itself concrete, mortar and paste that contain them, for rapid forming ettringite form, ett-rf, which can even cause rapid gypsum attack to said concrete). In contrast, sea spray and de-icing salts (chlorides strikes the reinforced steel concrete causing them electrochemical corrosion by "bite", although in that other chemical attack, such Al2O3r- causes rapid Friedel's salt formation, Fs-rf, too, to cause protector effect of the electrochemical corrosion of reinforcements for these chlorides), seawater (mutual aggressive action of chlorides and sulfates), carbonation, alkali-silica reaction, and, in addition, to influence the release of hydration heat, as well as in the rheological behavior of the pastes, etc., decreasing/shorting them thus their expected durability and sometimes even very seriously. But the most ironic thing is, that despite its referral totally opposed, compared to sulfates and chlorides, behaviour, - far not available is, a chemical analysis method for its quantitative determination, which is also relatively simple in operation, accurate, precise, rapid response, from a technical point of view for building (no more than 28 days), repeatable, reproducible, not involving danger to life safety of the people who need to manipulate and implement, economic, and also serve for both scientific research and technical side, and - has yet to be any chemical specification that sets maximum levels for Al2O3r-(%) in the natural or artificial pozzolan to be added to the cement and/or to the concrete that will be subject to a particularly aggressive chemical attack from those mentioned above, and in particular, to sulphates, chlorides or sea water. And for the sake of and justification of this need, it has to be said that the current Spanish Instruction for Structural Concrete EHE-08 does not provide any specification on "hydraulic factors" in general, nor the content of Al2O3r- (%) in fly ash, very particular, as Article 30º "Additions", or any other Article, although does provide, however, other chemical specifications lacking the necessary meaning in terms of the message Chemical Durability mentioned, nor the Article 37º which and for greater sake, is paradoxically entitled "Durability of the concrete and of their reinforcements". It has also not contemplated in the latest version just released from EN 197-1 standard entitled "Cement Part 1: Composition, specifications and conformity criteria for common cements". Nor, in EN 450-1:2006 entitled "Fly ash for concrete Part 1: Definitions, specifications and conformity criteria", nor by current Spanish Instruction for Cement Reception, RC-08, nor the ASTM C618-03 Standard either. The only chemical specification that both Standards, European and American, refer is one that says that the sum of the total contents of SiO2 (%), Al2O3 (%) and Fe2O3 (%) of natural and artificial pozzolan, must be greater than or equal to 70 % , defining pozzolans thus: "siliceous or aluminous and siliceous materials, which themselves do not have any cementitious value but finely divided and in the presence of moisture it reacts with calcium hydroxide at ordinary temperatures to form compounds possessing cementitious properties". Consequently and according to everything related before, the primary objective of this Doctoral Thesis has been: To design and start-up a new quantitative analytical method of technical utility (the maximum test duration is not more than 28 days), to determine the content of reactive alumina content, Al2O3r- (%), vitreous or amorphous alumina, of natural and artificial pozzolans. And once designed, validate at repeatability level and in accordance with appropriate statistical parameters with special emphasis on the acceptance criteria established by the American Association of Official Analytical Chemists (AOAC). And to achieve this, the innovation of this research has been based on the following general principles, namely: - All the alumina in any pozzolan, natural or artificial, that can be attacked, dissolved and leached by portlandite or calcium hydroxide, Ca(OH)2, in aqueous medium, is considered reactive alumina, Al2O3r-. - This aluminic fraction of natural or artificial pozzolan to analyze and study, has to be in such physical-chemical state that it can react in the presence of calcium hydroxide, sodium chloride and water status and to cause monochloro-aluminate hydrated calcium, C3A·CaCl2·10H2O or Friedel's salt. Moreover, such physical-chemical state of the pozzolan must be consistent with the definition of reactive alumina adopted in this research because of the actual performance of chemical durability that can reach confer on blended cements and their derivatives, concretes, mortars and pastes that are manufactured with the same. - The originality of this new analytical method, compared to the other methods for determining reactive alumina existing (collected in abbreviated form in the state of the art of this report), is the quantification of such aluminic fraction of natural or artificial pozzolans is performed by stoichiometric calculation based on this, in the chemical reaction of Friedel's salt formation after 28 days of the analysis of saline-basic hydration accelerated natural or artificial pozzolan also performed in this research, and the quantitative determination of the Friedel's salt has been performed by two instrumental analytical techniques known as thermogravimetric analysis (variant I), and Rietveld method with X-ray powder diffraction (variant II). - The chemical reaction of Friedel's salt formation after 28 days of accelerated saline-basic hydration of the selected natural and artificial pozzolan, was optimized to ensure that the single chemical compound of aluminium and chlorine formed was Friedel's salt only (dosing for this purpose in amount suitable chemical reagents: Ca(OH)2, NaCl and distilled water), and, on the other hand, maintaining the appropriate compromise between the highest yield from the chemical reaction (attack, dissolution and leaching in 28 days, all reactive alumina of pozzolan) and to accelerate the etching media, which were 40°C temperature, constant stirring and sealing the reactor. - The applicability and selectivity of the new analytical method, the subject of this Doctoral Thesis, was studied with a series of Spanish natural and artificial pozzolans, siliceous or siliceous and aluminous in nature, which were as follows: M0 (metakaolin 0), M1 (M0 with 50 % quartz), L and C (natural pozzolans of the Canary Islands), CV10 (fly ash 10), CV17 (fly ash 17), A (natural pozzolan of Almagro), O (natural pozzolan of Olot), and HS (silica fume). - All mineral admixtures were selected satisfied the physical and chemical requirements proposed to consider them as pozzolan, which was mandatory, so its Al2O3r- (%) content can determine by the new analytical method. These conditions were as follows: adequate degree of fineness of grind or average particle size (according to EN 451-2 standard), have been analyzed chemically (according to EN 196-2 or ASTM C311 standards), in order to determine their total contents of SiO2 (%), Al2O3 (%) and Fe2O3 (%), mainly, having also determined its reactive silica content, SiO2r- (%) (UNE 80225 standard), and fulfilled with testing of pozzolanicity or Frattini test (according to EN 196-5 standard) at 28 days age at least. The last criteria was mandatory until 1988, for any natural and artificial pozzolan to a factory intended to introduce cements in the manufacturing process of a new Portland cement type CEM IV pozzolanic additions, and with this Doctoral Thesis has made is to be used once again mandatory. And the results obtained using the new analytical method, of the Al2O3r- (%) content for each selected pozzolan, were as follows: - by its variant I: M0 29.9 % , M1 16.9 % , CV10 11.4 % , L 12.3 % , C 12.6 % , A 8.0 % , CV17 9.5 % and O 6.3 % of Al2O3r-, and - by its variant II: M0 30.7 % , M1 15.4 % , CV10 14.7% % , L 11.8 % , C 11.1 % , A 8.9 % , CV17 9.6 % and O 6.8 % of Al2O3r-. Finally, they would all be further contrasted by the calibration and validation of new analytical method, with reference values obtained from these same natural and artificial pozzolans, which had been given by the method of Florentin, consisting of attack, dissolve and leached with a basic attack (with Ca(OH)2 in aqueous medium and laboratory temperature, having also been its duration up to 1 year), followed by another acid attack (HCl, d = 1.12), all soluble aluminic fraction of pozzolan, and in particular their total content of reactive alumina, Al2O3r-(%), was this time as follows: M0 28.8 %, M1 16.7 %, CV10 9.7 %, L 11.2 %, C 12.2 %, A 13.0 %, CV17 10.6 % and O 9.5 % (and their siliceous and iron contents that are at par). This validation has shown on the new analytical method is more reliable than Florentin method, so it turns out to be entirely appropriate to get the results that have been tried by the same, besides providing them a relatively short space of time (28 days at most) and reasonably no high economic cost (unless mistake -free direct and indirect taxes, such economic cost would be between 800.00 - 900.00 €/pozzolan (most likely case), and about an one-third part around, in the event that the maximum age of the accelerated test is 7 days only (less likely case). So it is technically acceptable, to consider the range of possible variability of concentrations or contents pozzolan analyte with validation parameters such as: linearity (the results obtained are directly proportional to the instrumental response signal received), excellent sensitivity and accuracy, satisfactory repeatability values from the contents of each and Al2O3r- (%) each selected pozzolan, confirming therefore universal use. Finally, the advantages of the new analytical method over existing methods compiled from literature (Florentin method , the Lopez Ruiz method -HF and HNO3 40 % 2N-, the method of Murat and Driouche for clays -0.5M HF-, the method of Arjuan, Roy and Silbee for fly ash -HF 1 %- and its modification by Fernández-Jiménez et al -HF 1 %, 27Al MAS NMR and XRD (Rietveld method)-, and the method for determining the SiO2r-/Al2O3r- clay and fly ash ratio of Santaquiteria Ruiz et al -HF 1 %, NaOH 8M and ICP-AES-) are primarily and relatively short time get the result intended answer (28 days at most), its considerable lower cost, free from danger to the life safety of the people who need to manipulate and put in practice as well as its universality and selectivity, since it is applicable for all types of natural or artificial pozzolans, as it has been shown by the results of selected natural and artificial pozzolanic materials and analyzed in a range of analyte concentrations -reactive alumina, Al2O3r- (%) content- from 5 % to 30 % by mass, this range, on the other hand, includes virtually ALL existing transnational market in natural and artificial pozzolans and still exist. Therefore and in accordance with the above, the new analytical method is already performed by the variant I or II, because, - firstly, grounded to experimental approaches concerning its experimental procedure -"modus operandi"- which has been applied to a wide range of natural and artificial pozzolans, and - secondly, due to the quality of the results obtained with a great degree of accuracy and repeatability, it has been shown to possess significant scientific value in the research, but especially technical value -for quality control of natural and artificial pozzolans commonly added to Portland cement factory and/or directly to their concrete and mortar in plant-, and also be representative enough of the values obtained by the same probable chemical durability that each of them can reach out to give the concrete mortar and paste to which it belongs, as well as proper amount of partial replacement of Portland cement. To get in line with their own chemical-physical or physical-chemical features which can come to confer, as its chemical character (aluminic, silicic-aluminic, aluminic-silicic, aluminic-ferric-silicic or ferric-silicic), form and medium size of its particle is. Finally, the new analytical method has proven to meet all mandatory requirements established by ISO/IEC 17025 on the quality and reliability of new methods or analytical procedures are not standardized yet, in order to be considered appropriate this new analytical method, in this Doctoral Thesis it is to be proposed in the near future, before the corresponding AENOR (Spanish Association for Standardization and Certification) Commission, to start a procedure for certification and standardization.

An introduction to flow and transport in fractal models of porous media: Part I

This special issue gathers together a number of recent papers on fractal geometry and its applications to the modeling of flow and transport in porous media. The aim is to provide a systematic approach for analyzing the statics and dynamics of fluids in fractal porous media by means of theory, modeling and experimentation. The topics covered include lacunarity analyses of multifractal and natural grayscale patterns, random packing's of self-similar pore/particle size distributions, Darcian and non-Darcian hydraulic flows, diffusion within fractals, models for the permeability and thermal conductivity of fractal porous media and hydrophobicity and surface erosion properties of fractal structures.

Surface fitting in geomorphology - examples for regular-shaped volcanic landforms

In nature, several types of landforms have simple shapes: as they evolve they tend to take on an ideal, simple geometric form such as a cone, an ellipsoid or a paraboloid. Volcanic landforms are possibly the best examples of this ?ideal? geometry, since they develop as regular surface features due to the point-like (circular) or fissure-like (linear) manifestation of volcanic activity. In this paper, we present a geomorphometric method of fitting the ?ideal? surface onto the real surface of regular-shaped volcanoes through a number of case studies (Mt. Mayon, Mt. Somma, Mt. Semeru, and Mt. Cameroon). Volcanoes with circular, as well as elliptical, symmetry are addressed. For the best surface fit, we use the minimization library MINUIT which is made freely available by the CERN (European Organization for Nuclear Research). This library enables us to handle all the available surface data (every point of the digital elevation model) in a one-step, half-automated way regardless of the size of the dataset, and to consider simultaneously all the relevant parameters of the selected problem, such as the position of the center of the edifice, apex height, and cone slope, thanks to the highly performing adopted procedure. Fitting the geometric surface, along with calculating the related error, demonstrates the twofold advantage of the method. Firstly, we can determine quantitatively to what extent a given volcanic landform is regular, i.e. how much it follows an expected regular shape. Deviations from the ideal shape due to degradation (e.g. sector collapse and normal erosion) can be used in erosion rate calculations. Secondly, if we have a degraded volcanic landform, whose geometry is not clear, this method of surface fitting reconstructs the original shape with the maximum precision. Obviously, in addition to volcanic landforms, this method is also capable of constraining the shapes of other regular surface features such as aeolian, glacial or periglacial landforms.

Computer simulation of random parckings for self-similar particle size distributions in soil and granular materials: porosity and pore size distribution

A 2D computer simulation method of random packings is applied to sets of particles generated by a self-similar uniparametric model for particle size distributions (PSDs) in granular media. The parameter p which controls the model is the proportion of mass of particles corresponding to the left half of the normalized size interval [0,1]. First the influence on the total porosity of the parameter p is analyzed and interpreted. It is shown that such parameter, and the fractal exponent of the associated power scaling, are efficient packing parameters, but this last one is not in the way predicted in a former published work addressing an analogous research in artificial granular materials. The total porosity reaches the minimum value for p = 0.6. Limited information on the pore size distribution is obtained from the packing simulations and by means of morphological analysis methods. Results show that the range of pore sizes increases for decreasing values of p showing also different shape in the volume pore size distribution. Further research including simulations with a greater number of particles and image resolution are required to obtain finer results on the hierarchical structure of pore space.

The impact of mind on nature. Lessons learned from the ecology-aesthetics interplay

The effects of nature on people's mind have been an active research theme for decades. However, the impact of people's mind on landscape ecological health has received less attention. How and why perception, meanings and mental constructs determine the way nature is valued and consequently managed? How this interplay should be? These are in some cases more relevant questions than knowing what particular landscapes are preferred (Carlson 1993). This was the underlying inquiry in the focus group experience held in a natural protected area in La Rioja (Spain). Participants were asked to locate in a map areas representing low/high quality in terms of ecology and aesthetics. Some relevant conclusions for landscape management were derived from the analysis of participant's discourse in terms of ecological aesthetical appreciation and their consideration about how human takes place in nature.

Engineering Computational Emotion - A Reference Model for Emotion in Artificial Systems

Emotion is generally argued to be an influence on the behavior of life systems, largely concerning flexibility and adaptivity. The way in which life systems acts in response to a particular situations of the environment, has revealed the decisive and crucial importance of this feature in the success of behaviors. And this source of inspiration has influenced the way of thinking artificial systems. During the last decades, artificial systems have undergone such an evolution that each day more are integrated in our daily life. They have become greater in complexity, and the subsequent effects are related to an increased demand of systems that ensure resilience, robustness, availability, security or safety among others. All of them questions that raise quite a fundamental challenges in control design. This thesis has been developed under the framework of the Autonomous System project, a.k.a the ASys-Project. Short-term objectives of immediate application are focused on to design improved systems, and the approaching of intelligence in control strategies. Besides this, long-term objectives underlying ASys-Project concentrate on high order capabilities such as cognition, awareness and autonomy. This thesis is placed within the general fields of Engineery and Emotion science, and provides a theoretical foundation for engineering and designing computational emotion for artificial systems. The starting question that has grounded this thesis aims the problem of emotion--based autonomy. And how to feedback systems with valuable meaning has conformed the general objective. Both the starting question and the general objective, have underlaid the study of emotion, the influence on systems behavior, the key foundations that justify this feature in life systems, how emotion is integrated within the normal operation, and how this entire problem of emotion can be explained in artificial systems. By assuming essential differences concerning structure, purpose and operation between life and artificial systems, the essential motivation has been the exploration of what emotion solves in nature to afterwards analyze analogies for man--made systems. This work provides a reference model in which a collection of entities, relationships, models, functions and informational artifacts, are all interacting to provide the system with non-explicit knowledge under the form of emotion-like relevances. This solution aims to provide a reference model under which to design solutions for emotional operation, but related to the real needs of artificial systems. The proposal consists of a multi-purpose architecture that implement two broad modules in order to attend: (a) the range of processes related to the environment affectation, and (b) the range or processes related to the emotion perception-like and the higher levels of reasoning. This has required an intense and critical analysis beyond the state of the art around the most relevant theories of emotion and technical systems, in order to obtain the required support for those foundations that sustain each model. The problem has been interpreted and is described on the basis of AGSys, an agent assumed with the minimum rationality as to provide the capability to perform emotional assessment. AGSys is a conceptualization of a Model-based Cognitive agent that embodies an inner agent ESys, the responsible of performing the emotional operation inside of AGSys. The solution consists of multiple computational modules working federated, and aimed at conforming a mutual feedback loop between AGSys and ESys. Throughout this solution, the environment and the effects that might influence over the system are described as different problems. While AGSys operates as a common system within the external environment, ESys is designed to operate within a conceptualized inner environment. And this inner environment is built on the basis of those relevances that might occur inside of AGSys in the interaction with the external environment. This allows for a high-quality separate reasoning concerning mission goals defined in AGSys, and emotional goals defined in ESys. This way, it is provided a possible path for high-level reasoning under the influence of goals congruence. High-level reasoning model uses knowledge about emotional goals stability, letting this way new directions in which mission goals might be assessed under the situational state of this stability. This high-level reasoning is grounded by the work of MEP, a model of emotion perception that is thought as an analogy of a well-known theory in emotion science. The work of this model is described under the operation of a recursive-like process labeled as R-Loop, together with a system of emotional goals that are assumed as individual agents. This way, AGSys integrates knowledge that concerns the relation between a perceived object, and the effect which this perception induces on the situational state of the emotional goals. This knowledge enables a high-order system of information that provides the sustain for a high-level reasoning. The extent to which this reasoning might be approached is just delineated and assumed as future work. This thesis has been studied beyond a long range of fields of knowledge. This knowledge can be structured into two main objectives: (a) the fields of psychology, cognitive science, neurology and biological sciences in order to obtain understanding concerning the problem of the emotional phenomena, and (b) a large amount of computer science branches such as Autonomic Computing (AC), Self-adaptive software, Self-X systems, Model Integrated Computing (MIC) or the paradigm of models@runtime among others, in order to obtain knowledge about tools for designing each part of the solution. The final approach has been mainly performed on the basis of the entire acquired knowledge, and described under the fields of Artificial Intelligence, Model-Based Systems (MBS), and additional mathematical formalizations to provide punctual understanding in those cases that it has been required. This approach describes a reference model to feedback systems with valuable meaning, allowing for reasoning with regard to (a) the relationship between the environment and the relevance of the effects on the system, and (b) dynamical evaluations concerning the inner situational state of the system as a result of those effects. And this reasoning provides a framework of distinguishable states of AGSys derived from its own circumstances, that can be assumed as artificial emotion.

Herpes simplex virus vector-mediated expression of Bcl-2 prevents 6-hydroxydopamine-induced degeneration of neurons in the substantia nigra in vivo

6-Hydroxydopamine (6-OHDA) is widely used to selectively lesion dopaminergic neurons of the substantia nigra (SN) in the creation of animal models of Parkinson’s disease. In vitro, the death of PC-12 cells caused by exposure to 6-OHDA occurs with characteristics consistent with an apoptotic mechanism of cell death. To test the hypothesis that apoptotic pathways are involved in the death of dopaminergic neurons of the SN caused by 6-OHDA, we created a replication-defective genomic herpes simplex virus-based vector containing the coding sequence for the antiapoptotic peptide Bcl-2 under the transcriptional control of the simian cytomegalovirus immediate early promoter. Transfection of primary cortical neurons in culture with the Bcl-2-producing vector protected those cells from naturally occurring cell death over 3 weeks. Injection of the Bcl-2-expressing vector into SN of rats 1 week before injection of 6-OHDA into the ipsilateral striatum increased the survival of neurons in the SN, detected either by retrograde labeling of those cells with fluorogold or by tyrosine hydroxylase immunocytochemistry, by 50%. These results, demonstrating that death of nigral neurons induced by 6-OHDA lesioning may be blocked by the expression of Bcl-2, are consistent with the notion that cell death in this model system is at least in part apoptotic in nature and suggest that a Bcl-2-expressing vector may have therapeutic potential in the treatment of Parkinson’s disease.

R-type Ca2+ currents evoke transmitter release at a rat central synapse

Voltage-dependent Ca2+ currents evoke synaptic transmitter release. Of six types of Ca2+ channels, L-, N-, P-, Q-, R-, and T-type, only N- and P/Q-type channels have been pharmacologically identified to mediate action-potential-evoked transmitter release in the mammalian central nervous system. We tested whether Ca2+ channels other than N- and P/Q-type control transmitter release in a calyx-type synapse of the rat medial nucleus of the trapezoid body. Simultaneous recordings of presynaptic Ca2+ influx and the excitatory postsynaptic current evoked by a single action potential were made at single synapses. The R-type channel, a high-voltage-activated Ca2+ channel resistant to L-, N-, and P/Q-type channel blockers, contributed 26% of the total Ca2+ influx during a presynaptic action potential. This Ca2+ current evoked transmitter release sufficiently large to initiate an action potential in the postsynaptic neuron. The R-type current controlled release with a lower efficacy than other types of Ca2+ currents. Activation of metabotropic glutamate receptors and γ-aminobutyric acid type B receptors inhibited the R-type current. Because a significant fraction of presynaptic Ca2+ channels remains unidentified in many other central synapses, the R-type current also could contribute to evoked transmitter release in these synapses.

A role for jasmonate in pathogen defense of Arabidopsis

To investigate the role of jasmonate in the defense of plants against fungal pathogens, we have studied a mutant of Arabidopsis, fad3–2 fad7–2 fad8, that cannot accumulate jasmonate. Mutant plants were extremely susceptible to root rot caused by the fungal root pathogen Pythium mastophorum (Drechs.), even though neighboring wild-type plants were largely unaffected by this fungus. Application of exogenous methyl jasmonate substantially protected mutant plants, reducing the incidence of disease to a level close to that of wild-type controls. A similar treatment with methyl jasmonate did not protect the jasmonate-insensitive mutant coi1 from infection, showing that protective action of applied jasmonate against P. mastophorum was mediated by the induction of plant defense mechanisms rather than by a direct antifungal action. Transcripts of three jasmonate-responsive defense genes are induced by Pythium challenge in the wild-type but not in the jasmonate-deficient mutant. Pythium species are ubiquitous in soil and root habitats world-wide, but most (including P. mastophorum) are considered to be minor pathogens. Our results indicate that jasmonate is essential for plant defense against Pythium and, because of the high exposure of plant roots to Pythium inoculum in soil, may well be fundamental to survival of plants in nature. Our results further indicate that the fad3–2 fad7–2 fad8 mutant is an appropriate genetic model for studying the role of this important signaling molecule in pathogen defense.

The role of the ClpA chaperone in proteolysis by ClpAP

ClpA, a member of the Clp/Hsp100 family of ATPases, is a molecular chaperone and, in combination with a proteolytic component ClpP, participates in ATP-dependent proteolysis. We investigated the role of ClpA in protein degradation by ClpAP by dissociating the reaction into several discrete steps. In the assembly step, ClpA–ClpP–substrate complexes assemble either by ClpA–substrate complexes interacting with ClpP or by ClpA–ClpP complexes interacting with substrate; ClpP in the absence of ClpA is unable to bind substrates. Assembly requires ATP binding but not hydrolysis. We discovered that ClpA translocates substrates from their binding sites on ClpA to ClpP. The translocation step specifically requires ATP; nonhydrolyzable ATP analogs are ineffective. Only proteins that are degraded by ClpAP are translocated. Characterization of the degradation step showed that substrates can be degraded in a single round of ClpA–ClpP–substrate binding followed by ATP hydrolysis. The products generated are indistinguishable from steady-state products. Taken together, our results suggest that ClpA, through its interaction with both the substrate and ClpP, acts as a gatekeeper, actively translocating specific substrates into the proteolytic chamber of ClpP where degradation occurs. As multicomponent ATP-dependent proteases are widespread in nature and share structural similarities, these findings may provide a general mechanism for regulation of substrate import into the proteolytic chamber.

Natural trans-splicing in carnitine octanoyltransferase pre-mRNAs in rat liver

Carnitine octanoyltransferase (COT) transports medium-chain fatty acids through the peroxisome. During isolation of a COT clone from a rat liver library, a cDNA in which exon 2 was repeated, was characterized. Reverse transcription-PCR amplifications of total RNAs from rat liver showed a three-band pattern. Sequencing of the fragments revealed that, in addition to the canonical exon organization, previously reported [Choi, S. J. et al. (1995) Biochim. Biophys. Acta 1264, 215–222], there were two other forms in which exon 2 or exons 2 and 3 were repeated. The possibility of this exonic repetition in the COT gene was ruled out by genomic Southern blot. To study the gene expression, we analyzed RNA transcripts by Northern blot after RNase H digestion of total RNA. Three different transcripts were observed. Splicing experiments also were carried out in vitro with different constructs that contain exon 2 plus the 5′ or the 3′ adjacent intron sequences. Our results indicate that accurate joining of two exons 2 occurs by a trans-splicing mechanism, confirming the potential of these structures for this process in nature. The trans-splicing can be explained by the presence of three exon-enhancer sequences in exon 2. Analysis by Western blot of the COT proteins by using specific antibodies showed that two proteins corresponding to the expected Mr are present in rat peroxisomes. This is the first time that a natural trans-splicing reaction has been demonstrated in mammalian cells.

NMR characterization of lignins in Arabidopsis altered in the activity of ferulate 5-hydroxylase

Nuclear magnetic resonance (NMR) of isolated lignins from an Arabidopsis mutant deficient in ferulate 5-hydroxylase (F5H) and transgenic plants derived from the mutant by overexpressing the F5H gene has provided detailed insight into the compositional and structural differences between these lignins. Wild-type Arabidopsis has a guaiacyl-rich, syringyl-guaiacyl lignin typical of other dicots, with prominent β-aryl ether (β–O–4), phenylcoumaran (β–5), resinol (β–β), biphenyl/dibenzodioxocin (5–5), and cinnamyl alcohol end-group structures. The lignin isolated from the F5H-deficient fah1–2 mutant contained only traces of syringyl units and consequently enhanced phenylcoumaran and dibenzodioxocin levels. In fah1–2 transgenics in which the F5H gene was overexpressed under the control of the cauliflower mosaic virus 35S promoter, a guaiacyl-rich, syringyl/guaiacyl lignin similar to the wild type was produced. In contrast, the isolated lignin from the fah1–2 transgenics in which F5H expression was driven by the cinnamate 4-hydroxylase promoter was almost entirely syringyl in nature. This simple lignin contained predominantly β-aryl ether units, mainly with erythro-stereochemistry, with some resinol structures. No phenylcoumaran or dibenzodioxocin structures (which require guaiacyl units) were detectable. The overexpression of syringyl units in this transgenic resulted in a lignin with a higher syringyl content than that in any other plant we have seen reported.

Sex-specific quantitative trait loci affecting longevity in Drosophila melanogaster

Senescence, the decline in survivorship and fertility with increasing age, is a near-universal property of organisms. Senescence and limited lifespan are thought to arise because weak natural selection late in life allows the accumulation of mutations with deleterious late-age effects that are either neutral (the mutation accumulation hypothesis) or beneficial (the antagonistic pleiotropy hypothesis) early in life. Analyses of Drosophila spontaneous mutations, patterns of segregating variation and covariation, and lines selected for late-age fertility have implicated both classes of mutation in the evolution of aging, but neither their relative contributions nor the properties of individual loci that cause aging in nature are known. To begin to dissect the multiple genetic causes of quantitative variation in lifespan, we have conducted a genome-wide screen for quantitative trait loci (QTLs) affecting lifespan that segregate among a panel of recombinant inbred lines using a dense molecular marker map. Five autosomal QTLs were mapped by composite interval mapping and by sequential multiple marker analysis. The QTLs had large sex-specific effects on lifespan and age-specific effects on survivorship and mortality and mapped to the same regions as candidate genes with fertility, cellular aging, stress resistance and male-specific effects. Late age-of-onset QTL effects are consistent with the mutation accumulation hypothesis for the evolution of senescence, and sex-specific QTL effects suggest a novel mechanism for maintaining genetic variation for lifespan.