Interação genótipo x local x regime alimentar em bovinos nelore por meio de componentes principais de três modos

O principal objetivo deste estudo foi aplicar componentes principais com múltiplas matrizes de dados para verificar a interação tripla genótipo x local x regime alimentar no valor genético do efeito direto do peso, aos 205 dias de idade. Foram utilizados touros com filhos em três regiões de produção do Nordeste Brasileiro (Maranhão, Mata e Agreste, e Recôncavo Baiano) e criados nos regimes alimentares a pasto ou com suplementação. Não se evidenciou interação genótipo x local para a característica estudada, entretanto, constatou-se interação do genótipo x regime alimentar. A utilização dos touros deve ser direcionada de acordo com o regime alimentar de seus filhos.

Space-temporal dynamics of limnological variables in a floodplain wetland located at Ribeira do Iguape Valley (São Paulo, Brazil) at different hydrological periods

AIM: The main goal of this research was to investigate the influence of the hydrological pulses on the space-temporal dynamics of physical and chemical variables in a wetland adjacent to Jacupiranguinha River (São Paulo, Brazil); METHODS: Eleven sampling points were distributed among the wetland, a tributary by its left side and the adjacent river. Four samplings were carried out, covering the rainy and the dry periods. Measures of pH, dissolved oxygen, electrical conductivity and redox potential were taken in regular intervals of the water column using a multiparametric probe. Water samples were collected for the nitrogen and total phosphorus analysis, as well as their dissolved fractions (dissolved inorganic phosphorus, total dissolved phosphorus, ammoniacal nitrogen and nitrate). Total alkalinity and suspended solids were also quantified; RESULTS: The Multivariate Analysis of Variance showed the influence of the seasonality on the variability of the investigated variables, while the Principal Component Analysis gave rise in two statistical significant axes, which delimited two groups representative of the rainy and dry periods. Hydrological pulses from Jacupiranguinha River, besides contributing to the inputs of nutrients and sediments during the period of connectivity, accounted for the decrease in spatial gradients in the wetland. This "homogenization effect" was evidenced by the Cluster Analysis. The research also showed an industrial raw effluent as the main point source of phosphorus to the Jacupiranguinha River and, indirectly, to the wetland; CONCLUSIONS: Therefore, considering the scarcity of information about the wetlands in the study area, this research, besides contributing to the understanding of the influence of hydrological pulses on the investigated environmental variables, showed the need for adoption of conservation policies of these ecosystems face the increase anthropic pressures that they have been submitted, which may result in lack of their ecological, social and economic functions.

Microbial Translocation Is Associated with Extensive Immune Activation in Dengue Virus Infected Patients with Severe Disease

Background: Severe dengue virus (DENV) disease is associated with extensive immune activation, characterized by a cytokine storm. Previously, elevated lipopolysaccharide (LPS) levels in dengue were found to correlate with clinical disease severity. In the present cross-sectional study we identified markers of microbial translocation and immune activation, which are associated with severe manifestations of DENV infection. Methods: Serum samples from DENV-infected patients were collected during the outbreak in 2010 in the State of Sa˜o Paulo, Brazil. Levels of LPS, lipopolysaccharide binding protein (LBP), soluble CD14 (sCD14) and IgM and IgG endotoxin core antibodies were determined by ELISA. Thirty cytokines were quantified using a multiplex luminex system. Patients were classified according to the 2009 WHO classification and the occurrence of plasma leakage/shock and hemorrhage. Moreover, a (non-supervised) cluster analysis based on the expression of the quantified cytokines was applied to identify groups of patients with similar cytokine profiles. Markers of microbial translocation were linked to groups with similar clinical disease severity and clusters with similar cytokine profiles. Results: Cluster analysis indicated that LPS levels were significantly increased in patients with a profound pro-inflammatory cytokine profile. LBP and sCD14 showed significantly increased levels in patients with severe disease in the clinical classification and in patients with severe inflammation in the cluster analysis. With both the clinical classification and the cluster analysis, levels of IL-6, IL-8, sIL-2R, MCP-1, RANTES, HGF, G-CSF and EGF were associated with severe disease. Conclusions: The present study provides evidence that both microbial translocation and extensive immune activation occur during severe DENV infection and may play an important role in the pathogenesis.

Molecular markers for the assessment of genetic variability in threatened plant species

La variabilità genetica è un importante strumento per lo studio e la conservazione della biodiversità in specie rare e minacciate di estinzione. Durante il mio dottorato mi sono quindi occupata di mettere a punto diverse metodologie molecolari al fine di valutare la diversità genetica in due specie rare della flora italiana che presentano problematiche diverse e specifiche. I marcatori arbitrari RAPD e i marcatori semi-arbitrari ISSR sono stati utilizzati per valutare la diversità genetica in Quercus crenata Lam. e per confermare l’ipotesi della sua origine ibridogena dalle due specie presunte parentali Quercus cerris L. e Quercus suber L., essendo Q. crenata presente in Italia settentrionale dove Q. suber è attualmente assente. I marcatori SSR o microsatelliti sono invece stati messi a punto su una specie a rischio di estinzione, endemica dell’Appennino Tosco-Emiliano, Primula apennina Widmer, applicando una metodologia specifica, basata sulla costruzione di una libreria genomica arricchita per l’isolamento di primer specifici. I marcatori RAPD e ISSR, utilizzati su un totale di 85 campioni, hanno mostrato alti livelli di diversità molecolare entro le specie studiate, eccetto per Q. suber le cui popolazioni rappresentano il margine orientale di distribuzione della specie, per questo più sottoposte ad impoverimento genetico. Oltre alla cluster analysis (UPGMA) e alla Analisi delle Componenti Principali effettuate per entrambi i marcatori, che confermano l’ipotesi dell’origine ibrida degli individui di Q. crenata diffusi in Italia Settentrionale, sono stati calcolati l’indice di ibridità basato sul maximum likelihood, che dimostra una introgressione asimmetrica di Q. crenata verso il parentale caratterizzato da superiorità demografica (Q. cerris) e il test di Mantel. Quest’ultimo ha permesso di confrontare i due marcatori RAPD e ISSR utilizzati ottenendo una bassa correlazione, a conferma del fatto che, amplificando tratti differenti del DNA nucleare, i dati non sono sovrapponibili, sebbene forniscano risultati analoghi. Per l’isolamento di loci microsatelliti ipervariabili ho utilizzato il protocolllo FIASCO (Fast isolation by AFLP of sequences containing repeats- Zane et al. 2002) che permette di costruire una libreria genomica arricchita partendo dal DNA estratto da P. apennina. Tale procedura ha previsto la digestione del DNA genomico per la produzione di una miscela di frammenti di DNA. Tramite ibridazione con opportune sonde sono stati isolati i frammenti contenenti i microsatelliti. Sequenziando i cloni ricombinanti, ho ottenuto sequenze contenenti repeats sulle cui regioni fiancheggianti sono stati costruiti 15 coppie di primer che potranno, in seguito, essere utilizzate per definire la quota di riproduzione clonale in P. apennina e per valutare la diversità genetica delle popolazioni che coprono l’areale di distribuzione della specie. Data la loro natura altamente variabile e la loro abbondanza nel DNA, gli SSR saranno, come i marcatori RAPD e gli ISSR, ugualmente validi per lo studio della variabilità genetica e per l’analisi di problematiche specifiche legate alle specie rare.

Studio e validazione di una nuova metodica per la valutazione dello stato di forma

We observed 82 healthy subjects, from both sexes, aged between 19 and 77 years. All subjects performed two different tests: for being scientifically acknowledged, the first one was used as a reference and it was a stress test (CPX). During the entire test, heart rate and gas exchange were recorded continuously; the second, the actual object of this study, was a submaximal test (TOP). Only heart rate was recorded continuously. The main purpose was to determinate an index of physical fitness as result of TOP. CPX test allowed us to individuate anaerobic threshold. We used an incremental protocol of 10/20 Watt/min, different by age. For our TOP test we used an RHC400 UPRIGHT BIKE, by Air Machine. Each subject was monitored for heart frequency. After 2 minutes of resting period there was a first step: 3 minutes of pedalling at a constant rate of 60 RPM, (40 watts for elder subjects and 60 watts for the younger ones). Then, the subject was allowed to rest for a recovery phase of 5 minutes. Third and last step consisted of 3 minutes of pedalling again at 60 RPM but now set to 60 watts for elder subjects and 80 watts for the young subjects. Finally another five minutes of recovery. A good correlation was found between TOP and CPX results especially between punctua l heart rate reserve (HRR’) and anaerobic threshold parameters such as Watt, VO2, VCO2 . HRR’ was obtained by subtracting maximal heart rate during TOP from maximal theoretic heart rate (206,9-(0,67*age)). Data were analyzed through cluster analysis in order to obtain 3 homogeneous groups. The first group contains the least fit subjects (inactive, women, elderly). The other groups contain the “average fit” and the fittest subjects (active, men, younger). Concordance between test resulted in 83,23%. Afterwards, a linear combinations of the most relevant variables gave us a formula to classify people in the correct group. The most relevant result is that this submaximal test is able to discriminate subjects with different physical condition and to provide information (index) about physical fitness through HRR’. Compared to a traditional incremental stress test, the very low load of TOP, short duration and extended resting period, make this new method suitable to very different people. To better define the TOP index, it is necessary to enlarge our subject sample especially by diversifying the age range.

Analisi biomeccanica del MAWASHI GERI JODAN in cinture nere di Karate: modelli tecnici a confronto

In martial arts there are several ways to perform the turning kick . Following the martial arts or different learning models many types of kicks take shape. Mawashi geri is the karate turning kick. At the moment there are two models of mawashi geri, one comes from the traditional karate (OLD), and the other newer (NEW), who agrees to the change of the rules of W.K.F. (World Karate Federation) happened in 2000 (Macan J. et all 2006) . In this study we are focus on the differences about two models the mawashi geri jodan of karate. The purpose of this study is to analyse cinematic and kinetic parameters of mawashi geri jodan. Timing of the striking and supporting leg actions were also evaluated A Vicon system 460 IR with 6 cameras at sample frequency of 200 Hz was used. 37 reflective markers have been set on the skin of the subjects following the “PlugInGait-total body model”. The participants performed five repetitions of mawashi geri jodan at maximum rapidity with their dominant leg against a ball suspended in front of them placed at ear height. Fourteen skilled subjects (mean level black belt 1,7 dan; age 20,9±4,8 yrs; height 171,4±7,3 cm; weight 60,9±10,2 Kg) practicing karate have been split in two group through the hierarchical cluster analysis following their technical characteristics. By means of the Mann Whitney-U test (Spss-package) the differences between the two groups were verified in preparatory and execution phase. Kicking knee at start, kicking hip and knee at take-off were different between the two groups (p < 0,05). Striking hip flexion during the spin of the supporting foot was different between the two groups (p < 0,05). Peak angular velocity of hip flexion were different between the two groups (p < 0,05). Groups showed differences also in timing of the supporting spin movement. While Old group spin the supporting foot at 30% of the trial, instead New start spinning at 44% of the trial. Old group showed a greater supporting foot spin than New (Old 110° Vs New 82°). Abduction values didn’t show any differences between the two groups. At the hit has been evaluated a 120° of double hips abduction, for the entire sample. Striking knee extension happened for everybody after the kicking hip flexion and confirm the proximal-distal action of the striking leg (Sorensen H. 1996). In contrast with Pearson J.N. 1997 and Landeo R 2007, peak velocity of the striking foot is not useful to describe kick performance because affected by the stature. Two groups are different either in preparatory phase or in execution phase. The body is set in difference manner already before the take-off of the kicking foot. The groups differ for the timing of the supporting foot action Trainer should pay attention to starting posture and on abduction capacities of the athletes.

Development of a new galaxy classification technique and its application to the zCOSMOS survey

The purpose of this Thesis is to develop a robust and powerful method to classify galaxies from large surveys, in order to establish and confirm the connections between the principal observational parameters of the galaxies (spectral features, colours, morphological indices), and help unveil the evolution of these parameters from $z \sim 1$ to the local Universe. Within the framework of zCOSMOS-bright survey, and making use of its large database of objects ($\sim 10\,000$ galaxies in the redshift range $0 < z \lesssim 1.2$) and its great reliability in redshift and spectral properties determinations, first we adopt and extend the \emph{classification cube method}, as developed by Mignoli et al. (2009), to exploit the bimodal properties of galaxies (spectral, photometric and morphologic) separately, and then combining together these three subclassifications. We use this classification method as a test for a newly devised statistical classification, based on Principal Component Analysis and Unsupervised Fuzzy Partition clustering method (PCA+UFP), which is able to define the galaxy population exploiting their natural global bimodality, considering simultaneously up to 8 different properties. The PCA+UFP analysis is a very powerful and robust tool to probe the nature and the evolution of galaxies in a survey. It allows to define with less uncertainties the classification of galaxies, adding the flexibility to be adapted to different parameters: being a fuzzy classification it avoids the problems due to a hard classification, such as the classification cube presented in the first part of the article. The PCA+UFP method can be easily applied to different datasets: it does not rely on the nature of the data and for this reason it can be successfully employed with others observables (magnitudes, colours) or derived properties (masses, luminosities, SFRs, etc.). The agreement between the two classification cluster definitions is very high. ``Early'' and ``late'' type galaxies are well defined by the spectral, photometric and morphological properties, both considering them in a separate way and then combining the classifications (classification cube) and treating them as a whole (PCA+UFP cluster analysis). Differences arise in the definition of outliers: the classification cube is much more sensitive to single measurement errors or misclassifications in one property than the PCA+UFP cluster analysis, in which errors are ``averaged out'' during the process. This method allowed us to behold the \emph{downsizing} effect taking place in the PC spaces: the migration between the blue cloud towards the red clump happens at higher redshifts for galaxies of larger mass. The determination of $M_{\mathrm{cross}}$ the transition mass is in significant agreement with others values in literature.

Well-being, distress and health status in a population of adolescent students

The present work explores the psychosocial issues emerging from a large cross-sectional study aimed to assess the prevalence, clinical manifestations, and psychosocial correlates of hyperandrogenism in a population of Italian high school students. Participants were 1804 adolescents, aged between 15 and 19 years, who volunteered to fill in a package of self-report questionnaires (including the Psychosocial Index, the Symptom Questionnaire and Ryff’s Psychological Well-Being scales for the assessment of psychological aspects) and undergo a comprehensive physical examination. Significant gender differences were found with regard to psychological distress, with females reporting higher scores compared with males, but not on well-being dimensions. The relationships of well-being to distress were found to be complex. Although inversely associated, well-being and ill-being appeared to be distinct domains of mental functioning. The evaluation of the moderating effects of well-being in the association between stress and psychological distress indicated that well-being may act as a protective factor, contributing to less pronounced psychological distress as stress levels increased. Higher rates of somatic complaints were found among current smokers. However, substance use (i.e., smoking and drug use) was also found to be positively associated with some well-being dimensions. A considerable number of participants were found to present with disordered eating symptoms, particularly females, and associated higher stress levels and lower quality of life. Sport activities were found to favourably affect psychological health. As to clinical signs of hyperandrogenism, a significant impairment in psychosocial functioning was found among females, whereas no effects on psychological measures could be detected among males. Subgroups of adolescents with distinct clinical and psychological characteristics could be identified by means of cluster analysis. The present study provides new insights into better understanding of the complex relationships between well-being, distress and health status in the adolescent population, with important clinical implications.

Impatti dell'adozione di standard privati nel sistema agroalimentare: il caso del BRC Global Standard for Food Safety in Italia

L’argomento scelto riguarda l’adozione di standard privati da parte di imprese agro-alimentari e le loro conseguenze sulla gestione globale dell’azienda. In particolare, lo scopo di questo lavoro è quello di valutare le implicazioni dovute all’adozione del BRC Global Standard for Food Safety da parte delle imprese agro-alimentari italiane. La valutazione di tale impatto è basata sulle percezioni dei responsabili aziendali in merito ad aspetti economici, gestionali, commerciali, qualitativi, organizzativi. La ricerca ha seguito due passaggi fondamentali: innanzitutto sono state condotte 7 interviste in profondità con i Responsabili Qualità (RQ) di aziende agro-alimentari italiane certificate BRC Food. Le variabili estrapolate dall’analisi qualitativa del contenuto delle interviste sono state inserite, insieme a quelle rilevate in letteratura, nel questionario creato per la successiva survey. Il questionario è stato inviato tramite e-mail e con supporto telefonico ad un campione di aziende selezionato tramite campionamento random. Dopo un periodo di rilevazione prestabilito, sono stati compilati 192 questionari. L’analisi descrittiva dei dati mostra che i RQ sono in buona parte d’accordo con le affermazioni riguardanti gli elementi d’impatto. Le affermazioni maggiormente condivise riguardano: efficienza del sistema HACCP, efficienza del sistema di rintracciabilità, procedure di controllo, formazione del personale, miglior gestione delle urgenze e non conformità, miglior implementazione e comprensione di altri sistemi di gestione certificati. Attraverso l’analisi ANOVA fra variabili qualitative e quantitative e relativo test F emerge che alcune caratteristiche delle aziende, come l’area geografica, la dimensione aziendale, la categoria di appartenenza e il tipo di situazione nei confronti della ISO 9001 possono influenzare differentemente le opinioni degli intervistati. Successivamente attraverso un’analisi fattoriale sono stati estratti 8 fattori partendo da un numero iniziale di 28 variabili. Sulla base dei fattori è stata applicata la cluster analysis di tipo gerarchico che ha portato alla segmentazione del campione in 5 gruppi diversi. Ogni gruppo è stato interpretato sulla base di un profilo determinato dal posizionamento nei confronti dei vari fattori. I risultati oltre ad essere stati validati attraverso focus group effettuati con ricercatori ed operatori del settore, sono stati supportati anche da una successiva indagine qualitativa condotta presso 4 grandi retailer inglesi. Lo scopo di questa successiva indagine è stato quello di valutare l’esistenza di opinioni divergenti nei confronti dei fornitori che andasse quindi a sostenere l’ipotesi di un problema di asimmetria informativa che nonostante la presenza di standard privati ancora sussiste nelle principali relazioni contrattuali. Ulteriori percorsi di ricerca potrebbero stimare se la valutazione dell’impatto del BRC può aiutare le aziende di trasformazione nell’implementazione di altri standard di qualità e valutare quali variabili possono influenzare invece le percezioni in termini di costi dell’adozione dello standard.

Bridging innovation, nature and tradition: assessment of strategies for rural tourism development in Maramureş (Romania)

In the frame of EU rural policy, always more oriented towards environmental concerns and green livelihoods, Romania stands out for the predominance of rural areas and high nature value farming. The country has to face the challenge of joining the modernization process of rural farming systems with the valorization of local assets. Tourism has emerged as one of the main drivers of change and contributors for a sustainable exploitation of local resources. Rural tourism (RT) can foster the enhancement of the territorial capital (TC), the preservation of public goods (PGs) and the promotion of a more environmental oriented livelihood. The research focuses on a case study area, two valleys from Maramureş, where environmental approaches as diversification strategies are partially explored. The work investigates the role of tourism initiatives for the promotion of green oriented practices. The first part of the work is based on a literature review and interdisciplinary analysis of secondary data to identify the key issues: from rural development policy, to the concept of TC, of PGs and RT. The Romanian development programmes and related strategies are investigated; afterwards the characteristics of the County and the role of RT as diversification and valorisation policies is considered. The second part is based on the collection of primary data through interviews to different local stakeholders (farmers owners of rural guesthouses, local administrators, networks and artisans). The main frequencies are analyzed, a cluster analysis is computed to evaluate the similarities within the most representative groups and a comparative analysis is carried out between the two Valleys. The frame of the analysis is based on a set of indicators following the dimensions of the TC, to assess the characteristics of the local stakeholders and to outline the perception about the local PGs and on the adopted strategies to manage the territory. Final considerations are elaborated and few scenarios are outlined, giving relevance to the importance of improving awareness and creating embeddedness among public-private local stakeholders and resources as a tool for a socio-economic and environmental development of the area.

Comparing Different Approaches for Clustering Categorical Data

There are different ways to do cluster analysis of categorical data in the literature and the choice among them is strongly related to the aim of the researcher, if we do not take into account time and economical constraints. Main approaches for clustering are usually distinguished into model-based and distance-based methods: the former assume that objects belonging to the same class are similar in the sense that their observed values come from the same probability distribution, whose parameters are unknown and need to be estimated; the latter evaluate distances among objects by a defined dissimilarity measure and, basing on it, allocate units to the closest group. In clustering, one may be interested in the classification of similar objects into groups, and one may be interested in finding observations that come from the same true homogeneous distribution. But do both of these aims lead to the same clustering? And how good are clustering methods designed to fulfil one of these aims in terms of the other? In order to answer, two approaches, namely a latent class model (mixture of multinomial distributions) and a partition around medoids one, are evaluated and compared by Adjusted Rand Index, Average Silhouette Width and Pearson-Gamma indexes in a fairly wide simulation study. Simulation outcomes are plotted in bi-dimensional graphs via Multidimensional Scaling; size of points is proportional to the number of points that overlap and different colours are used according to the cluster membership.

Innovation and economic performance of the firms in the service sector: relevant issues and open problems

This thesis is a collection of essays related to the topic of innovation in the service sector. The choice of this structure is functional to the purpose of single out some of the relevant issues and try to tackle them, revising first the state of the literature and then proposing a way forward. Three relevant issues has been therefore selected: (i) the definition of innovation in the service sector and the connected question of measurement of innovation; (ii) the issue of productivity in services; (iii) the classification of innovative firms in the service sector. Facing the first issue, chapter II shows how the initial width of the original Schumpeterian definition of innovation has been narrowed and then passed to the service sector form the manufacturing one in a reduce technological form. Chapter III tackle the issue of productivity in services, discussing the difficulties for measuring productivity in a context where the output is often immaterial. We reconstruct the dispute on the Baumol’s cost disease argument and propose two different ways to go forward in the research on productivity in services: redefining the output along the line of a characteristic approach; and redefining the inputs, particularly analysing which kind of input it’s worth saving. Chapter IV derives an integrated taxonomy of innovative service and manufacturing firms, using data coming from the 2008 CIS survey for Italy. This taxonomy is based on the enlarged definition of “innovative firm” deriving from the Schumpeterian definition of innovation and classify firms using a cluster analysis techniques. The result is the emergence of a four cluster solution, where firms are differentiated by the breadth of the innovation activities in which they are involved. Chapter 5 reports some of the main conclusions of each singular previous chapter and the points worth of further research in the future.

Entwicklung und Anwendung molekularbiologischer Methoden zur Art- und Stamm-Identifizierung pro- und eukaryotischer Organismen

Das Wachstum von Milchsäurebakterien-Arten der Gattungen Lactobacillus, Pediococcus und Leuconostoc während der Weinfermentation kann durch die Bildung verschiedener Stoffwechselprodukte zu Weinfehlern führen. Um rechtzeitig Gegenmaßnahmen ergreifen zu können und einem Weinverderb vorzubeugen, bedarf es geeigneter Identifizierungsmethoden. Klassische mikrobiologische Methoden reichen oft nicht aus, um Mikroorganismen auf Art- und Stammniveau gezielt zu identifizieren. Wegen ihrer schnellen Durchführbarkeit und Zuverlässigkeit sind molekularbiologische Identifizierungsmethoden zur Kontrolle der mikrobiellen Flora während der Lebensmittelfermentierung in der heutigen Zeit unabdingbar. In der vorliegenden Forschungsarbeit wurden die 23S rRNA-Gensequenzen von neun Pediococcus-Typstämmen sequenziert, analysiert und phylogenetische Analysen durchgeführt. Zur Art-Identifizierung der Pediokokken wurden PCR-Primer generiert und ein Multiplex PCR System entwickelt, mit dem alle typischen Arten simultan in einer Reaktion nachgewiesen werden konnten. Die Ergebnisse der Multiplex PCR-Identifizierung von 62 Pediococcus-Stämmen aus Kulturensammlungen und 47 neu isolierten Stämmen aus Wein zeigten, dass einige Stämme unter falschen Artnamen hinterlegt waren, und dass P. parvulus im Weinanbaugebiet Rheinhessen weit verbreitet war. Die Fähigkeit der Pediococcus-Stämme zur Exopolysaccharid-Synthese wurde durch den Nachweis zweier Gene überprüft. Auf Basis der 23S rDNA-Sequenzen wurden rRNA-Sekundärstrukturen mit der neu entwickelten Software Structure Star generiert, die zum Auffinden von Zielbereichen für fluoreszenzmarkierte DNA-Sonden geeignet waren. Die Sequenzunterschiede zwischen den Pediococcus-Arten reichten aus, um zwei Gruppen durch Fluoreszenz in situ Hybridisierung differenzieren zu können. Die Verwendung unmarkierter Helfer-sonden verbesserte die Zugänglichkeit der Sonden an die rRNA, wodurch das Fluoreszenz-Signal verstärkt wurde. Um Milchsäurebakterien durch Denaturierende Gradienten Gel Elektrophorese differenzieren zu können, wurden Primer entwickelt, mit denen ein hochvariabler 23S rDNA-Bereich amplifiziert werden konnte. Die Nested Specifically Amplified Polymorphic DNA (nSAPD)-PCR wurde in der vorliegenden Arbeit zur Art- und Stamm-Differenzierung pro- und eukaryotischer Organismen angewandt. Es wurden vor allem weinrelevante Milchsäurebakterien der Gattungen Oenococcus, Lactobacillus, Pediococcus und Leuconostoc und Hefen der Gattungen Dekkera / Brettanomyces und Saccharomyces untersucht. Die Cluster-Analyse der Pediococcus-Typstämme führte zu einer unterschiedlichen Baum-Topologie im Vergleich zum phylogenetischen 23S rDNA-Stammbaum. Die Verwandtschaftsverhältnisse der untersuchten O. oeni-Stämme aus Starterkulturen konnten in Bezug auf eine frühere Cluster-Analyse reproduziert werden. Die Untersuchung von 40 B. bruxellensis-Stämmen aus rheinhessischen Weinproben zeigte eine Gruppierung der Stämme gemäß dem Ort der Probennahme. Beim Vergleich der Verwandtschaftsverhältnisse von Stämmen der Arten P. parvulus und B. bruxellensis, die aus denselben Weinproben isoliert wurden, konnte eine hohe Übereinstimmung der beiden Baum-Topologien beobachtet werden. Anhand der SAPD-PCR Untersuchung von Sekthefen aus Starterkulturen konnten alle Stämme der Art S. cerevisiae zugeordnet werden. Die nSAPD-PCR war darüber hinaus geeignet, um höhere Eukaryoten wie Weinreben zu differenzieren und es konnten die Verwandtschaftsverhältnisse von Mäusen und menschlichen Individuen durch Cluster-Analysen nachvollzogen werden. Mit Hilfe der Sequence Characterized Amplified Region (SCAR)-Technik wurden (n)SAPD-Marker in SCAR-Marker konvertiert. Die neu generierten SCAR-Primer konnten zur simultanen Art-Identifizierung von sieben weinschädlichen Milchsäurebakterien in einer Multiplex PCR erfolgreich eingesetzt werden. Die in dieser Arbeit entwickelten molekularbiologischen Identifizierungsmethoden können zum Beispiel in der mikrobiologischen Qualitätskontrolle Anwendung finden.

Entstehung und Diversifizierung der mittel- und westeuropäischen Salicornia-Arten

HintergrundrnDie hygrohalophytische Gattung Salicornia ist in Mittel- und Westeuropa durch vier nah verwandte, sympatrisch vorkommende Arten vertreten. Es handelt sich um die zwei tetraploiden Arten S. procumbens und S. stricta und die diploiden Arten S. europaea und S. ramosissima. Morphologisch lassen sich die Arten zwar nur schwer voneinander unterscheiden, die morphologische Variation ist aber wiederum so hoch, dass mehrere distinkte Arten/Morphotypen unterschieden werden können. Bezüglich ihrer Verteilung im hochdynamischen Lebensraum Salzwiese findet man die verschiedenen Arten/Morphotypen in überlappenden Bereichen des Habitats. Ihr relativ vorhersagbares Auftreten entlang eines ökologischen Gradienten innerhalb ihres Lebensraumes scheint jedoch für eine ökologische Differenzierung der verschiedenen Arten/Morphotypen zu sprechen. Aufgrund des sympatrischen Vorkommens der scheinbar ökologisch und morphologisch differenzierten Morphotypen stellt sich die Frage, durch welche Prozesse diese entstanden sein könnten (genetische und ökologische Differenzierung) aber auch welche Prozesse die dauerhafte Koexistenz der Arten (reproduktive Isolationsmechanismen) aufrechterhalten.rnZielsetzungrnZiel dieser Arbeit war es, die Entstehung und Diversifizierung der mittel- und westeuropäischen Salicornia-Arten anhand von molekulargenetischen, ökologischen und reproduktionsbiologischen Methoden zu untersuchen.rnMethodenrnAnhand einer AFLP-Fragmentanalyse mit 89 Herkünften aus Großbritannien, Frankreich und Deutschland wurden molekulare Phylogenien erstellt sowie eine Hauptkomponenten- und Clusteranalyse durchgeführt. Um die ökologische Differenzierung und phänotypische Plastizität der vier Arten/Morphotypen zu untersuchen wurde ein reziprokes Transplantationsexperiment durchgeführt. Um die reproduktiven Isolationsmechanismen der Arten/Morphotypen zu untersuchen, wurden verschiedene Beobachtungen und Experimente durchgeführt.rnErgebnissernDie molekularen Analysen konnten zwar die beiden Artengruppen (Ploidiestufen) trennen, lieferten aber innerhalb dieser weder ein taxonomisches noch ein geographisches Signal. Akzessionen mit identischer Morphologie aus der gleichen Population verteilten sich in den Analysen in verschiedene genetische Cluster. Identische Morphotypen aus verschiedenen geographischen Regionen gruppieren teilweise zusammen. Das Transplantationsexperiment zeigte für die beiden tetraploiden Arten S. procumbens und S. stricta eine deutliche ökologische Differenzierung, bei S. procumbens in Form von verminderter Fitness und einer beschleunigten Phänologie, bei S. stricta nur in Form einer veränderten Phänologie. Bezüglich der Plastizität zeigten beide tetraploiden Arten eine konstante Morphologie. Die beiden diploiden Taxa S. europaea und S. ramosissima zeigten weder eine klare ökologische Differenzierung noch eine konstante Morphologie. Bezüglich der Reproduktionsbiologie konnte bestätigt werden, dass Selbstung bei allen Taxa der hauptsächliche Reproduktionsmodus ist. Bei den tetraploiden Taxa zeigte sich zwar ein geringes Maß an Fremdbefruchtung, bei den diploiden Taxa führen dagegen morphologische Besonderheiten zu hochgradiger Selbstung.rnRésumérnDie in Mittel- und Westeuropa vorkommenden Salicornia-Arten stellen keine evolutionären Einheiten dar. Die beiden tetraploiden Taxa sollten auf Grund ihrer parallelen Entstehung und ökologischen Differenzierung als Ökotypen angesprochen werden. Beide Ökotypen weisen ein hohes Ausbreitungspotential aus und persistieren als Inzuchtlinien mit geringem Anteil an Fremdbestäubung. Die diploiden Taxa sind weder ökologisch differenziert noch morphologisch stabil und sollten deshalb als nur ein morphologisch sehr variables, aus zahlreichen weitverbreiteten Inzuchtlinien bestehendes Taxon angesehen werden.

Petrologisch-geochemische Charakterisierung quartärer Laven der Eifel als Grundlage zur archäometrischen Herkunftsbestimmung römischer Mühlsteine

Lava aus der quartären Vulkanregion der Eifel wurde in römischer Zeit großmaßstäblich abgebaut, um daraus Mühlsteine hoher Qualität herzustellen, die in großen Mengen in weite Teile des Römischen Reiches exportiert wurden. Somit erweisen sich diese Mühlsteine als ideale Indikatoren für Handelsgebiete und –wege dieser Zeit. Für eine erfolgreiche Herkunftsanalyse von Fundstücken ist eine genaue Charakterisierung der infrage kommenden Rohstoffe die unbedingte Voraussetzung. Aus diesem Grund konzentriert sich diese Arbeit auf die geochemische Definition der 16 bekannten römischen „Basalt“-Abbaustellen in den Vulkanfeldern der Ost- und Westeifel, mit dem vorrangigen Ziel, eine möglichste eindeutige Charakterisierung der einzelnen Abbaustellen zu erreichen. Auf dieser Basis wird eine Vorgehensweise zur folgenden Provenienzanalyse der Mühlsteine entwickelt. Um die geochemische Variabilität der Laven zu erfassen wurden die Abbaustellen großflächig beprobt. Die Proben wurden zunächst petrographisch bestimmt und der Phasenbestand mittels Röntgendiffraktometrie (XRD) untersucht. Die Haupt- und Spurenelement-Zusammensetzung wurde anhand von Röntgenfluoreszenzanalysen und Laser-Massenspektrometrie mit induktiv gekoppeltem Plasma (LA-ICP-MS) ermittelt, die Sr-Nd-Pb-Isotopie ausgewählter Proben mittels Thermo-Ionen-Massenspektrometrie (TIMS). Es zeigte sich, dass auf Grundlage der Haupt- und Spurenelementzusammensetzung, gemessen mit RFA, eine Abgrenzung der Abbaustellen zueinander mittels einer Kombination aus geochemischer Diskriminierung mit Cluster- und Diskriminanzanalysen gelingt. Die anschließende Provenienzanalyse der Mühlsteinfundstücke erfolgt analog zur Charakterisierung der Abbaustellen. Im ersten Schritt wird eine geochemische Zuordnung des Fundstücks vorgenommen, um zu überprüfen, ob eine Eifeler Herkunft überhaupt in Frage kommt. Lässt der geochemische Vergleich mit den Referenzdaten aus dem Gelände eine Eifeler Herkunft zu, kommt im zweiten Schritt die Clusteranalyse zum Einsatz. Hier wird auf multivariater Ebene geprüft, ob das Fundstück einer Eifeler Abbaustelle oder einem Cluster von Eifeler Abbaustellen zugeordnet werden kann. Bei einer positiven Zuordnung wird ergänzend als dritter Schritt die Diskriminanzanalyse angewendet, anhand der das Mühlstein-Fundstück einer Abbaustelle mit einer bestimmten Wahrscheinlichkeit zugewiesen wird. Bei 68 analysierten Mühlsteinen aus verschiedenen Regionen Mitteleuropas konnte so für 49 Fundstücke eine Eifeler Provenienz festgestellt werden. Alle römischen Eifeler Mühlsteine entstammen dem Bellerberg bei Mayen, ein mittelalterliches Stück aus dem Niedermendiger Lavastrom. Die Zuordnung der übrigen 19 Mühlsteine zu anderen möglichen Abbaugebieten erfolgt anhand geochemischer Daten aus der Literatur. Aufgrund der unzureichenden Datenlage sind im Falle dieser Proben jedoch im Gegensatz zur Lavastrom-genauen Zuordnung der Eifeler Mühlen lediglich Vermutungen über die Herkunftsregionen möglich. Damit zeigt sich, dass eine ausführliche Referenzdatenbank der in Frage kommenden Rohstoffe die erforderliche Basis für erfolgreiche Provenienzanalysen ist. Die Möglichkeit der genauen Zuordnungen von Mühlsteinen zu den Eifeler Abbaustellen belegt, dass die Verbindung von geochemischer Auswertung mit Cluster- und Diskriminanzanalysen ein hilfreiches Verfahren zur Provenienzanalyse darstellt.