Regional differences in modelled net production and shallow remineralization in the North Atlantic subtropical gyre

[EN] We used 5-yr concomitant data of tracer distribution from the BATS (Bermuda Time-series Study) and ESTOC (European Station for Time-Series in the Ocean, Canary Islands) sites to build a 1-D tracer model conservation including horizontal advection, and then compute net production and shallow remineralization rates for both sites. Our main goal was to verify if differences in these rates are consistent with the lower export rates of particulate organic carbon observed at ESTOC. Net production rates computed below the mixed layer to 110m from April to December for oxygen, dissolved inorganic carbon and nitrate at BATS (1.34±0.79 molO2 m?2, ?1.73±0.52 molCm?2 and ?125±36 mmolNm?2) were slightly higher for oxygen and carbon compared to ESTOC (1.03±0.62 molO2 m?2, ?1.42±0.30 molCm?2 and ?213±56 mmolNm?2), although the differences were not statistically significant. Shallow remineralization rates between 110 and 250m computed at ESTOC (?3.9±1.0 molO2 m?2, 1.53±0.43 molCm?2 and 38±155 mmolNm?2) were statistically higher for oxygen compared to BATS (?1.81±0.37 molO2 m?2, 1.52± 0.30 molCm?2 and 147±43 mmolNm?2). The lateral advective flux divergence of tracers, which was more significant at ESTOC, was responsible for the differences in estimated oxygen remineralization rates between both stations. According to these results, the differences in net production and shallow remineralization cannot fully explain the differences in the flux of sinking organic matter observed between both stations, suggesting an additional consumption of nonsinking organic matter at ESTOC.

Carbon active fluxes in the Northeast Atlantic Subtropical Gyre

Programa de doctorado en Oceanografía

The structure of planktonic communities under variable coastal upwelling conditions off Cape Ghir (31ºN), in the Canary Current System (NW Africa)

Universidad de Las Palmas de Gran Canaria. Facultad de Ciencias del Mar. Programa de doctorado en Oceanografía. Diploma de Estudios Avanzados

Assessment of the presence of pharmaceutical compounds in seawater samples from coastal area of Gran Canaria Island (Spain)

[EN]This study presents the evaluation of seven pharmaceutical compounds belonging to different commonly used therapeutic classes in seawater samples from coastal areas of Gran Canaria Island. The target compounds include atenolol (antihypertensive), acetaminophen (analgesic), norfloxacin and ciprofloxacin (antibiotics), carbamazepine (antiepileptic) and ketoprofen and diclofenac (anti-inflammatory). Solid phase extraction (SPE) was used for the extraction and preconcentration of the samples, and liquid chromatography tandem mass spectrometry (LC-MS/MS) was used for the determination of the compounds. Under optimal conditions, the recoveries obtained were in the range of 78.3% to 98.2%, and the relative standard deviations were less than 11.8%. The detection and quantification limits of the method were in the ranges of 0.1–2.8 and 0.3–9.3 ng·L−1, respectively. The developed method was applied to evaluate the presence of these pharmaceutical compounds in seawater from four outfalls in Gran Canaria Island (Spain) during one year. Ciprofloxacin and norfloxacin were found in a large number of samples in a concentration range of 9.0–3551.7 ng·L−1. Low levels of diclofenac, acetaminophen and ketoprofen were found sporadically.

Short-term variability and trophic interactions within planktonic community in subtropical waters of he Canary Islands (Northeast atlantic)

ES]Los giros subtropicales abarcan grandes áreas del océano donde la productividad del ecosistema se sostiene a través del reciclado de materia y energía. En estas aguas, la interacción entre la disponibilidad de recursos y la presión de los niveles tróficos superiores determina la dinámica de la comunidad planctónica. Sin embargo, en aguas subtropicales, el conocimiento de la variabilidad temporal o el papel de los diferentes componentes de la comunidad dentro de la red trófica es bastante limitado. En esta tesis se evalúa la variabilidad a corto plazo de los diferentes componentes de la comunidad planctónica. El picoplancton dominó la comunidad salvo durante la época productiva, en la que los organismos autótrofos de mayor tamaño desempeñaron un papel destacado. Nuestros resultados muestran como la variabilidad estacional está relacionada con fuerzas “bottom-up”, mientras que los procesos “top-down” dominan a una escala de tiempo más corta. Encontramos que el microzooplancton ejerce un gran impacto sobre la comunidad microbiana, en organismos tanto autótrofos como heterótrofos. Además, observamos un acoplamiento muy estrecho entre estos consumidores y sus presas. Otro mecanismo que regula la estructura planctónica es la depredación de los migradores verticales sobre el zooplancton. Así, la variabilidad del mesozooplancton epipelágico está controlada por un ciclo de depredación vinculado a la iluminación de la luna. En este trabajo realizamos una simulación de esta variabilidad con la que se obtuvieron valores de mortalidad comunitaria de los que derivamos el flujo de carbono activo hacia la zona mesopelágica. Estos valores calculados de transporte activo de carbono son del mismo orden de magnitud que el flujo gravitacional en aguas subtropicales. En el Atlántico noreste la comunidad marina también podría estar influenciada por las tormentas de polvo sahariano que ocurren con gran frecuencia en la zona. En este sentido, se estudió la respuesta de la comunidad planctónica en un período de deposición de polvo atmosférico de gran intensidad, en el año 2010, sin observar una clara respuesta en términos de producción primaria. Por el contrario, la biomasa de diatomeas y mesozooplancton sí se vio aumentada en gran medida tras el paso de una fuerte tormenta de polvo del Sáhara, mientras que los organismos autótrofos de menor tamaño se vieron afectados negativamente. Los resultados de esta tesis suponen una contribución importante para entender la dinámica planctónica tan compleja en los ecosistemas subtropicales, y además, pone de manifiesto la necesidad de llevar a cabo muestreos oceanográficos a escalas de tiempo más cortas.

Multi-parameter observations from coastal waters to the deepest trenche: challenges studying the carbón system with optode technology

[EN]This presentation will give examples on how multi-parameter platforms have been used in a variety of applications ranging from shallow coastal on-line observatories down to measuring in the deepest Ocean trenches. Focus will be on projects in which optode technology (primarily for CO2 and O2) has served to study different aspects of the carbon system including primary production/consumption, air-sea exchange, leakage detection from underwater storage of CO2 and measurements from moving platforms like gliders and ferries. The performance of recently developed pH optodes will als

Wind-driven circulation for the eastern North Atlantic Subtropical Gyre from Argo data

ÈN]A trans-oceanic section at 24.5°N in the North Atlantic has been sampled at a decadal frequency. This work demonstrates that the wind-driven component of the Meridional Overturning Circulation (MOC) may be monitored using autonomous profiling floats deployed in the eastern North Atlantic Subtropical Gyre. More than 500 CTD vertical profiles from the surface to 2000 m depth, spanning one year (from April 2002 to March 2003), are used to compute the geostrophic transport stream function at 24.5°N. The baroclinic transport obtained from the autonomous profiling floats is not statistically different than that from three hydrographic cruises carried out in 1957, 1981 and 1992. A good agreement is found between the geostrophic transport stream function and the transport derived from the wind field through the Sverdrup relation.

Statistical assessment of annual patterns in coastal extreme wave conditions

[EN]The annual cycle in extreme values of significant wave height is examined by transforming the timing ofthe storm peaks in a circular variable, with the aim of taking advantage of the many tests devised to explore uniformity on the circle. The use of four different but complementary uniformity tests makes possible a robust assessment of the annual cycle statistical significance. Seasonality of storms in a long time series of significant wave heights, measured in a coastal zone, is examined. The presence of a seasonal pattem is statistically beyond doubt.

New insights into POC dynamics in the subtropical northeast Atlantic Ocean

[EN]The capacity of the ocean to sequester atmospheric carbon (CO2) depends to a large extent on the dynamics of biogenic carbon in the water column. However, most current global and regional estimates of carbon balances are solely based on particles collected with drifting and moored sediment traps. As a consequence, construction of ocean carbon budgets has long been guided by the simplification introduced by sediment traps, which give a 1D vision of the whole picture. In this thesis we have assessed a quantitative analysis of the flux magnitude and the mechanisms of transport of the whole particle spectrum (suspended, slowly-sinking and sinking particles).

Two fluid numerical model for coastal applications

Wave breaking is an important coastal process, influencing hydro-morphodynamic processes such as turbulence generation and wave energy dissipation, run-up on the beach and overtopping of coastal defence structures. During breaking, waves are complex mixtures of air and water (“white water”) whose properties affect velocity and pressure fields in the vicinity of the free surface and, depending on the breaker characteristics, different mechanisms for air entrainment are usually observed. Several laboratory experiments have been performed to investigate the role of air bubbles in the wave breaking process (Chanson & Cummings, 1994, among others) and in wave loading on vertical wall (Oumeraci et al., 2001; Peregrine et al., 2006, among others), showing that the air phase is not negligible since the turbulent energy dissipation involves air-water mixture. The recent advancement of numerical models has given valuable insights in the knowledge of wave transformation and interaction with coastal structures. Among these models, some solve the RANS equations coupled with a free-surface tracking algorithm and describe velocity, pressure, turbulence and vorticity fields (Lara et al. 2006 a-b, Clementi et al., 2007). The single-phase numerical model, in which the constitutive equations are solved only for the liquid phase, neglects effects induced by air movement and trapped air bubbles in water. Numerical approximations at the free surface may induce errors in predicting breaking point and wave height and moreover, entrapped air bubbles and water splash in air are not properly represented. The aim of the present thesis is to develop a new two-phase model called COBRAS2 (stands for Cornell Breaking waves And Structures 2 phases), that is the enhancement of the single-phase code COBRAS0, originally developed at Cornell University (Lin & Liu, 1998). In the first part of the work, both fluids are considered as incompressible, while the second part will treat air compressibility modelling. The mathematical formulation and the numerical resolution of the governing equations of COBRAS2 are derived and some model-experiment comparisons are shown. In particular, validation tests are performed in order to prove model stability and accuracy. The simulation of the rising of a large air bubble in an otherwise quiescent water pool reveals the model capability to reproduce the process physics in a realistic way. Analytical solutions for stationary and internal waves are compared with corresponding numerical results, in order to test processes involving wide range of density difference. Waves induced by dam-break in different scenarios (on dry and wet beds, as well as on a ramp) are studied, focusing on the role of air as the medium in which the water wave propagates and on the numerical representation of bubble dynamics. Simulations of solitary and regular waves, characterized by both spilling and plunging breakers, are analyzed with comparisons with experimental data and other numerical model in order to investigate air influence on wave breaking mechanisms and underline model capability and accuracy. Finally, modelling of air compressibility is included in the new developed model and is validated, revealing an accurate reproduction of processes. Some preliminary tests on wave impact on vertical walls are performed: since air flow modelling allows to have a more realistic reproduction of breaking wave propagation, the dependence of wave breaker shapes and aeration characteristics on impact pressure values is studied and, on the basis of a qualitative comparison with experimental observations, the numerical simulations achieve good results.

Study of the circulation processes in the northern Adriatic sea - coastal area and Venice lagoon inlets

This work is a detailed study of hydrodynamic processes in a defined area, the littoral in front of the Venice Lagoon and its inlets, which are complex morphological areas of interconnection. A finite element hydrodynamic model of the Venice Lagoon and the Adriatic Sea has been developed in order to study the coastal current patterns and the exchanges at the inlets of the Venice Lagoon. This is the first work in this area that tries to model the interaction dynamics, running together a model for the lagoon and the Adriatic Sea. First the barotropic processes near the inlets of the Venice Lagoon have been studied. Data from more than ten tide gauges displaced in the Adriatic Sea have been used in the calibration of the simulated water levels. To validate the model results, empirical flux data measured by ADCP probes installed inside the inlets of Lido and Malamocco have been used and the exchanges through the three inlets of the Venice Lagoon have been analyzed. The comparison between modelled and measured fluxes at the inlets outlined the efficiency of the model to reproduce both tide and wind induced water exchanges between the sea and the lagoon. As a second step, also small scale processes around the inlets that connect the Venice lagoon with the Northern Adriatic Sea have been investigated by means of 3D simulations. Maps of vorticity have been produced, considering the influence of tidal flows and wind stress in the area. A sensitivity analysis has been carried out to define the importance of the advection and of the baroclinic pressure gradients in the development of vortical processes seen along the littoral close to the inlets. Finally a comparison with real data measurements, surface velocity data from HF Radar near the Venice inlets, has been performed, which allows for a better understanding of the processes and their seasonal dynamics. The results outline the predominance of wind and tidal forcing in the coastal area. Wind forcing acts mainly on the mean coastal current inducing its detachment offshore during Sirocco events and an increase of littoral currents during Bora events. The Bora action is more homogeneous on the whole coastal area whereas the Sirocco strengthens its impact in the South, near Chioggia inlet. Tidal forcing at the inlets is mainly barotropic. The sensitivity analysis shows how advection is the main physical process responsible for the persistent vortical structures present along the littoral between the Venice Lagoon inlets. The comparison with measurements from HF Radar not only permitted a validation the model results, but also a description of different patterns in specific periods of the year. The success of the 2D and the 3D simulations on the reproduction both of the SSE, inside and outside the Venice Lagoon, of the tidal flow, through the lagoon inlets, and of the small scale phenomena, occurring along the littoral, indicates that the finite element approach is the most suitable tool for the investigation of coastal processes. For the first time, as shown by the flux modeling, the physical processes that drive the interaction between the two basins were reproduced.

Coastal flood vulnerability assessment with geomatic methods: Test sites of western Thailand, Sydney (Australia) and aeolian islands (south tyrrhenian sea, Italy)

The work undertaken in this PhD thesis is aimed at the development and testing of an innovative methodology for the assessment of the vulnerability of coastal areas to marine catastrophic inundation (tsunami). Different approaches are used at different spatial scales and are applied to three different study areas: 1. The entire western coast of Thailand 2. Two selected coastal suburbs of Sydney – Australia 3. The Aeolian Islands, in the South Tyrrhenian Sea – Italy I have discussed each of these cases study in at least one scientific paper: one paper about the Thailand case study (Dall’Osso et al., in review-b), three papers about the Sydney applications (Dall’Osso et al., 2009a; Dall’Osso et al., 2009b; Dall’Osso and Dominey-Howes, in review) and one last paper about the work at the Aeolian Islands (Dall’Osso et al., in review-a). These publications represent the core of the present PhD thesis. The main topics dealt with are outlined and discussed in a general introduction while the overall conclusions are outlined in the last section.