Studies in crystal engineering: Effect of fluorine substitution in crystal packing and topological photodimerization of styryl coumarins in the solid state

Styryl coumarins generally yield centrosymmetric (alpha-mode, anti-HT) photodimers when subjected to irradiation in the solid state, However, the substitution of fluorine dramatically alters the packing mode and steers the molecules 4-(4-fluorostyryl)coumarin 1 and 4-(2-fluorostyryl)coumarin 2 to form a stereospecific photodimer, beta-mode, syn-HH across the styrenic double bond (yield 78-85%). The stereochemistry of the photodimer 2a has been established by X-ray crystallography. There is no evidence for the presence of C-H ... F interactions. The true nature of the weak atom-atom interactions called into play when fluorine is substituted is not clear, It is observed that the fluoro substituted compounds have greater crystal density than the corresponding unsubstituted ones.

Mutagenicity associated with O6-methylguanine-DNA damage and mechanism of nucleotide flipping by AGT during repair

Methylated guanine damage at O6 position (i.e. O6MG) is dangerous due to its mutagenic and carcinogenic character that often gives rise to G:C-A:T mutation. However, the reason for this mutagenicity is not known precisely and has been a matter of controversy. Further, although it is known that O6-alkylguanine-DNA alkyltransferase (AGT) repairs O6MG paired with cytosine in DNA, the complete mechanism of target recognition and repair is not known completely. All these aspects of DNA damage and repair have been addressed here by employing high level density functional theory in gas phase and aqueous medium. It is found that the actual cause of O6MG mediated mutation may arise due to the fact that DNA polymerases incorporate thymine opposite to O6MG, misreading the resulting O6MG:T complex as an A:T base pair due to their analogous binding energies and structural alignments. It is further revealed that AGT mediated nucleotide flipping occurs in two successive steps. The intercalation of the finger residue Arg 128 into the DNA double helix and its interaction with the O6MG: C base pair followed by rotation of the O6MG nucleotide are found to be crucial for the damage recognition and nucleotide flipping.

Influence of ethanol/water mixture on the undrained shear strength of pure clays

The mechanical properties of clays are highly dependent not only on the stress/strain ratio to which the material is subjected but also on the chemistry of the pore fluids which in turn affects the intergranular or the effective stresses. Atterberg limits and vane shear tests were performed with different pore fluids in order to observe how the fine-grained material mechanically responded. The diffuse double layer theory has been used to interpret the data of vane shear tests in order to explain the variation of geotechnical responses with the different clays. Van der Waals forces and double layer forces were obtained and capillary forces calculated. The results show that while for kaolinite and illite the chemistry of the pore fluids has no influence on the water content and hence on the mechanical behaviour of the material, Na-smectite shows a strong correlation between the dielectric constant of the pore fluids and an increase in undrained shear strength. The data obtained extends an understanding of the influence of the dielectric constant (epsilon) of the pore fluids on the geotechnical properties of fine-grained materials.

A study of epileptogenic network structures in rat hippocampal cultures using first spike latencies during synchronization events

Study of hypersynchronous activity is of prime importance for combating epilepsy. Studies on network structure typically reconstruct the network by measuring various aspects of the interaction between neurons and subsequently measure the properties of the reconstructed network. In sub-sampled networks such methods lead to significant errors in reconstruction. Using rat hippocampal neurons cultured on a multi-electrode array dish and a glutamate injury model of epilepsy in vitro, we studied synchronous activity in neuronal networks. Using the first spike latencies in various neurons during a network burst, we extract various recurring spatio-temporal onset patterns in the networks. Comparing the patterns seen in control and injured networks, we observe that injured networks express a wide diversity in their foci (origin) and activation pattern, while control networks show limited diversity. Furthermore, we note that onset patterns in glutamate injured networks show a positive correlation between synchronization delay and physical distance between neurons, while control networks do not.

A study of epileptogenic network structures in rat hippocampal cultures using first spike latencies during synchronization events

Study of hypersynchronous activity is of prime importance for combating epilepsy. Studies on network structure typically reconstruct the network by measuring various aspects of the interaction between neurons and subsequently measure the properties of the reconstructed network. In sub-sampled networks such methods lead to significant errors in reconstruction. Using rat hippocampal neurons cultured on a multi-electrode array dish and a glutamate injury model of epilepsy in vitro, we studied synchronous activity in neuronal networks. Using the first spike latencies in various neurons during a network burst, we extract various recurring spatio-temporal onset patterns in the networks. Comparing the patterns seen in control and injured networks, we observe that injured networks express a wide diversity in their foci (origin) and activation pattern, while control networks show limited diversity. Furthermore, we note that onset patterns in glutamate injured networks show a positive correlation between synchronization delay and physical distance between neurons, while control networks do not.

Direct ultrafast laser written C-band waveguide amplifier in Er-doped chalcogenide glass

This paper reports the fabrication and characterization of an ultrafast laser written Er-doped chalcogenide glass buried waveguide amplifier; Er-doped GeGaS glass has been synthesized by the vacuum sealed melt quenching technique. Waveguides have been fabricated inside the 4 mm long sample by direct ultrafast laser writing. The total passive fiber-to-fiber insertion loss is 2.58 +/- 0.02 dB at 1600 nm, including a propagation loss of 1.6 +/- 0.3 dB. Active characterization shows a relative gain of 2.524 +/- 0.002 dB/cm and 1.359 +/- 0.005 dB/cm at 1541 nm and 1550 nm respectively, for a pump power of 500 mW at a wavelength of 980 nm. (C) 2012 Optical Society of America

Correlations of vaporization performance of conventional and biofuel sprays in a crossflow heated chamber

Pre-vaporization and pre-mixing are the two main features of LPP type of combustor that operate on liquid fuels. The pre-vaporization length scale is one of its most important design parameters. In this study, the goal is to put forward a simulation based correlation for fuel vaporization performance as a function of dimensionless parameters for crossflow type of injections. Two types of fuels are studied here: jet-A and one of its potential biofuel substitutes, RME. Different sets of spray simulations are considered for crossflow type of injections. Correlations are provided for both jet-A and RME's vaporization performance as a function of non-dimensional inlet air temperature, fuel/air momentum flux ratio and normalized spray traverse distance. (C) 2012 Elsevier Ltd. All rights reserved.

Photo-thermal modifications in ultrafast laser inscribed chalcogenide glass waveguides

We report here, a finite difference thermal diffusion (FDTD) model for controlling the cross-section and the guiding nature of the buried channel waveguides fabricated on GeGaS bulk glasses using the direct laser writing technique. Optimization of the laser parameters for guiding at wavelength 1550 nm is done experimentally and compared with the theoretical values estimated by FDTD model. The mode field diameter (MFD) between 5.294 mu m and 24.706 mu m were attained by suitable selection of writing speed (1mm/s to 4 mm/s) and pulse energy (623 nJ to 806 nJ) of the laser at a fixed repletion rate of 100 kHz. Transition from single-mode to multi-mode waveguide is observed at pulse energy 806nJ as a consequence of heat accumulation. The thermal diffusion model fits well for single-mode waveguides with the exception of multi-mode waveguides.

Scaling law characterizing the dynamics of the transition of HIV-1 to error catastrophe

Increasing the mutation rate, mu, of viruses above a threshold, mu(c), has been predicted to trigger a catastrophic loss of viral genetic information and is being explored as a novel intervention strategy. Here, we examine the dynamics of this transition using stochastic simulations mimicking within-host HIV-1 evolution. We find a scaling law governing the characteristic time of the transition: tau approximate to 0.6/(mu - mu(c)). The law is robust to variations in underlying evolutionary forces and presents guidelines for treatment of HIV-1 infection with mutagens. We estimate that many years of treatment would be required before HIV-1 can suffer an error catastrophe.

Enhanced Plasticity of Zr-Based Bulk Metallic Glass Matrix Composite with Ductile Reinforcement

A composite material containing uniformly distributed micrometer-sized Nb particles in a Zr-based amorphous matrix was prepared by suction cast. The resulting material exhibits high fractured strength over 1550 MPa and enhanced plastic strain of about 29.7% before failure in uniaxial compression test at room temperature. Studies of the serrations on the stress-strain curves and the shear bands on the fractured samples reveal that the amplitude of the stress drop of each serration step corresponds to the extent of the propagation of a single shear band through the materials. The composite exhibits more serration steps and smaller amplitude of stress drop due to the pinning of shear band propagation by ductile Nb particles.

Efecto de diferentes niveles de aplicación de fertilizante nitrogenado sobre la producción de semilla del Andropogon gayanus kunth var. CIAT 621 (Gamba), en la zona de Carazo

El estudio se desarrollo de junio a diciembre de 1994, en la finca "El Pastor" municipio de Santa Teresa, Departamento de Carazo. Ubicada a una elevación de 367 msnm. y entre las latitudes 1301' y 1302'. La zona registró tamperaturas promedios de 24°C y unos 1550 mm de precipitación media por año; por lo cual es posible considerar la zona agroecológica como trópico seco. Se evaluó el efecto de diferentes niveles de fertilizante nitrogenado sobre la producción de semilla de Andropogon gayanus Kunth, para ello se utilizó un diseño experimental de Bloques Completos al Azar (BCA) y se estudió el efecto de un solo factor (Niveles de fertilizante) con cuatro repeticiones formándose un total de veinte tratamientos 2 El ensayo se realizó en un área total de 875 m en la toma de muestras se empleó el método del metro cuadrado para la evaluación de- MS y forraje verde. En cambio, para evaluar la producción de semilla cruda se evaluó el área útil (3x4 m) de parcela. No se realizó poda de control, a causa del mal invierno. Se procedió a aplicar de una sola vez los diferentes niveles de fertilizante. El estudio estadístico contempló el uso del análisis de la varianza (ANDEVA) y se hizo una separación de medias por la prueba de Duncan. Se midió la influencia porcentual de cinco niveles de fertilizante (0, 25, 50, 75, 100 Kg de Urea, 46% N2/h3.), sobre la producción de semilla cruda de la parcela útil l (SCPU), también el Porcentaje de semilla pura ajustada (PSPA), kilogramos de forraje verde por m 2 (KGFV), porcentaje de materia seca (%MS) y• porcent.aje de viabilidad de la semilla (% VIAB>. Las variables% MS y Semilla cruda evaluadas resultaron con valores significativos para los bloques, a excepción del % SPA, % VIAB y Forraje verde. Para los tratamientos resultó significativ solamente la variable Forraje verde al (P<0.05>. Al evaluar los resultados obtenido sometiendo las variables en estudio al análisis estadístico y considerando el factor costo de producción- rentabilidad y rendimiento productivo en el campo; seleccionamos el tratamiento 50 Kg urea 146%/N,)/ha como el mas idóneo para la producción de semilla del Andropogon gayanus para la zona evaluada.

Structure of Vortex Dislocations in a Wake-type Flow

Structure and dynamical processes of vortex dislocations in a kind of wake-type flow are described clearly by vortex lines, which are directly constructed from data of three-dimensional direct numerical simulations of the flow evolution.

Hemoparásitos en bovinos de engorde en las fincas Cañas Gordas y Las Alturas, comarca San Agustín, Acoyapa, Chontales, en los meses de agosto - octubre 2012

Con el objetivo de determinar la prevalencia de hemoparásitos en bovinos de engorde y su efecto sobre la productividad de los animales; se identificó la presencia de ectoparásitos vectores y se analizaron los factores agroecológicos que permiten la presencia de estas parasitosis en Las fincas Cañas Gordas y Las Alturas ubicadas en la comarca San Agustín, municipio de Acoyapa, departamento de Chontales; Cañas Gordas con las coordenadas geográficas latitud norte 11° 52´ 60” y longitud oeste 85°24´0”, con una elevación de 36 msnm y Las Alturas con las coordenadas geográficas latitud norte 11° 58´ 03.41”, longitud oeste 85°21´47.47” y con una elevación de 136 msnm, comprendidas en una zona subtropical de montaña, ambas fincas con una humedad relativa del 76%, precipitación promedio anual de 1 134,1 mm y una temperatura anual promedio 27. 2 °C. Para realizar el estudio se tomó un lote de 150 animales por cada finca en un rango de peso de 280 a 320 kg muestreando el 10% de la población total, tomando 15 animales por finca, para un total de 30 exámenes, efectuando 4 muestreos con intervalos de 21 días entre los meses de agosto, septiembre y octubre. La toma de muestra se realizó mediante venopunción de la yugular, trasladándose estas al laboratorio de Parasitología (FACA – UNA) se procedió a realizar 2 frotis sanguíneos por cada muestra utilizando el método de tinción coloración Giemsa, para la posterior observación de los hemoparásitos. Obteniendo tres especies de hemoparásitos Babesia, Anaplasma y Tripanosoma, Se determinó que en la finca Cañas Gordas la prevalencia de Babesia es de 53%, en Las Alturas es del 73%; en ambas fincas la prevalencia de Anaplasma es de 93%; de Tripanosoma es del 27% únicamente en Cañas Gordas, este último debido a la presencia del lago Cocibolca en las inmediaciones de la finca que permite un ambiente húmedo favorable para una mayor presencia del hospedero intermediario (Tábanus). Las pérdidas económicas anuales ocasionadas por la presencia de hemoparásitos en Las Alturas fué de C$ 139,243.50 en un lote de 150 animales; en Cañas Gordas fué de C$ 234,837.00. Para realizar un control eficaz de los hemoparásitos se debe contar con un plan de control de ectoparásitos, efectuar exámenes complementarios periódicamente para determinar la especie de hemoparásitos y así aplicar un tratamiento específico, además de mantener un plan de vigilancia permanente.

Influencia de rotación de cultivos y control de malezas sobre la cenosis, el crecimiento, desarrollo y rendimiento del cultivo de sorgo (Sorghum bicolor (L) Moench) y del cultivo de soya (Glycine max (L) Merr) cv. cristalina

En el presente trabajo se trabajó la influencia de tres métodos de control de malezas en cinco rotaciones de cultivos sobre la dinámica de asociaciones de malezas y el crecimiento y desarrollo de los cultivos. El ensayo se inició en postrera en 1992 en la Cooperativa Rigoberto López Pérez, Managua, considerando en este trabajo los resultados de la siembra de primera de 1992, se evaluó las rotaciones Sorgo-Sorgo, Maíz-Sorgo, Maíz-Soya, Pepino-Saya y Pepino-Sorgo y los métodos de control químico, control período crítico y control limpia periódica. Los resultados demuestran que el control limpia periódica efectuó un control satisfactorio de las malezas, mientras que los controles químico y por período crítico fueron insuficientes, debido a que predominaban las especies de monocotiledóneas como: cenchrus spp y panicum hurtícaule de Competitividad alargada. Las rotaciones influyen sobre el nivel de enmalezamiento, siendo más bajo en las Rotaciones Pepino-Sorgo y en las Rotaciones Pepino-Saya que en las demás rotaciones. En cuanto al rendimiento los mejores resultados se obtuvieron en la Rotación Pepino-Sorgo con 3,560.33 kg/Ha, (tres mil quinientos sesenta punto treinta y tres kilogramos por hectárea) de Sorgo y Maíz-Soya con 1,484.9 kg/Ha, (un mil cuatrocientos ochenta y cuatro punto nueve kilogramos por hectárea) de Soya debido a que el cultivo ejerció un mayor control sobre las malezas.