Construction of shuttle, expression vector of human tumor necrosis factor alpha (hTNF-alpha) gene and its expression in a cyanobacterium, Anabaena sp. PCC 7120

The construction of the shuttle, expression vector of human tumor necrosis factor alpha (hTNF-alpha) gene and its expression in a cyanobacterium Anabaena sp. PCC 7120 was reported. The 700-bp hTNF cDNA fragments have been recovered from plasmid pRL-rhTNF, then inserted downstream of the promoter PpsbA in the plasmid pRL439. The resultant intermediary plasmid pRL-TC has further been combined with the shuttle vector pDC-8 to get the shuttle, expression vector pDC-TNF. The expression of the rhTNF gene in Escherichia coil has been analyzed by SDS-PAGE and thin-layer scanning, and the results show that the expressed TNF protein with these two vectors is 16.9 percent (pRL-TC) and 15.0 percent (pDC-TNF) of the total proteins in the cells, respectively, while the expression level of TNF gene in plasmid pRL-rhTNF is only 11.8 percent. Combined with the participation of the conjugal and helper plasmids, pDC-TNF has been introduced into Anabaena sg PCC 7120 by triparental conjugative transfer, and the stable transgenic strains have been obtained. The existence of the introduced plasmid pDC-TNF in recombinant cyanobacterial cells has been demonstrated by the results of the agarose electrophoresis with the extracted plasmid samples and Southern blotting with alpha-(32)p labeled hTNF cDNA probes, while the expression of the hTNF gene in Anabaena sp. PCC 7120 has been confirmed by the results of Western blotting with extracted protein samples and human TNF-alpha monoclonal antibodies. The cytotoxicity assays using the mouse cancer cell line L929 proved the cytotoxicity of the TNF in the crude extracts from the transgenic cyanobacterium Anabaena sp. PCC 7120.

A novel tumor necrosis factor ligand superfamily member (CsTL) from Ciona savignyi: Molecular identification and expression analysis

A novel invertebrate TNF ligand was identified and characterized in Ciona savignyi. The CsTL cDNA consisted of 995 nucleotides and encoded 281 amino acids. A conserved TNF family signature and several motifs of TNF ligand superfamily were identified in deduced amino acid sequence of CsTL. Phylogenetic analysis grouped CsTL, CiTNF (predicted TNF ligand superfamily homolog in Ciona intestinalis) and urchin TL1A with their own cluster apart from mammalian TNF alpha, LTA, TNFSF15 and fish TNFa proteins. Expression studies demonstrated that CsTL mRNA is present in all tested tissues from unchallenged ascidians and its expression was significantly upregulated in hemocytes following LIPS injection. The recombinant CsTL protein expressed using a baculovirus expression system showed potential cytotoxic activity in L929 cells. Present results indicated that TNF ligand superfamity molecules are present in marine invertebrates. (C) 2008 Elsevier Ltd. All rights reserved.

SNAP-23蛋白在鲈鱼巨噬细胞白细胞介素1β分泌过程中的功能

SNARE蛋白家族是所有真核细胞胞吐及分泌作用中的关键因子，由其介导的运输囊泡膜与靶膜的锚靠、融合为胞内蛋白的运出提供了一条重要途径。体外试验表明，Syntaxin6-Syntaxin7-Vti1b，SNAP-23-Syntaxin4等SNARE核心蛋白之间精确的相互作用是哺乳动物巨噬细胞肿瘤坏死因子α (TNF-α)运输和分泌的必备条件，在机体非特异性免疫应答反应过程中起重要作用。 本研究受上述启示，旨在揭示SNARE蛋白在海洋鱼类免疫细胞内重要细胞因子白细胞介素1β (IL-1β)的分泌过程中的作用。参照Percoll密度梯度离心技术，从鲈鱼头肾组织分离纯化巨噬细胞进行稳定培养；利用RT-PCR方法克隆出鲈鱼t-SNARE蛋白SNAP-23和Syntaxin3的部分cDNA序列，再结合先前克隆的VAMP2和已知的鲈鱼IL-1β，TNF-α和IL-8的基因序列，设计特异性引物。利用Real-time PCR技术在mRNA水平上精确测定鲈鱼巨噬细胞中上述6种基因在革兰氏阴性菌脂多糖(LPS)分子刺激下的表达变化，发现SNAP-23基因与三种细胞因子基因的表达正相关；通过免疫印迹检测SNAP-23蛋白表达变化，利用酶联免疫吸附试验(ELISA)检测IL-1β的分泌水平，在蛋白水平上验证了SNAP-23表达与IL-1β分泌的正相关性；利用5`RACE和3`RACE技术克隆出鲈鱼SNAP-23全长基因，结合定点突变策略和靶向PCR克隆手段，构建鲈鱼SNAP-23野生型融合质粒pEGFP-SNAP-23wt，Cys缺失突变融合质粒pEGFP-SNAP-23ΔCys和模拟E型肉毒神经毒素(BoNT/E)切割突变融合质粒pEGFP-SNAP-23ΔBoNT/E，以及鲈鱼IL-1β野生型融合表达质粒IL-1β-pEGFP和IL-1β-pEYFP。所有融合蛋白均在鲈鱼巨噬细胞内成功表达，结合ELISA实验结果发现，SNAP-23野生型的表达对IL-1β的分泌有促进作用，而Cys缺失突变体的表达则抑制IL-1β向胞外分泌。首次证实了鱼类巨噬细胞内SNAP-23蛋白在IL-1β分泌过程中的重要作用。此外通过与GFP共表达，定位了IL-1β分子在巨噬细胞内的分布，发现新合成的IL-1β分子很可能像TNFα一样经“内质网－胞质－伪足－胞外” 的分泌路径运出胞外。

三种红藻活性物质的发现及松节藻醇提物抗糖尿病药理研究

海藻是海洋生物中的一大类群，由于其特殊的生活环境，能够代谢产生大量结构独特多变和活性特殊多样的代谢产物，是化学和生物活性多样性研究的重要对象之一。我国海域辽阔，海藻资源丰富，为寻找结构新颖、生理活性独特的先导化合物，加强对海藻资源的开发利用，本论文对中国沿海的三种海洋红藻进行了化学成分和生物活性研究，同时对山东青岛海域生物量丰富的一种海洋红藻松节藻进行了动物体内抗糖尿病活性研究。 利用正相硅胶柱色谱、Sephadex LH-20柱色谱以及反相HPLC和重结晶等现代分离手段，对山东青岛沿海的红藻扇形叉枝藻（Gymnogongrus flabelliformis）进行了系统的化学成分研究，从中得到单体化合物26个，通过波谱学方法（IR、MS、NMR等）鉴定了他们的结构，分别为(3R,6R,7E)-(+)-3-O-phenylacetyl- 4,7-megastigmadiene-9-one（1），(3R,7E)-(-)-3-O-phenylacetyl-5,7-megastigmadiene -9-one（2），(3S,6R,7E)-(+)-3-hydroxyl-4,7-megastigmadien-9-one（3），(3S,5R,6S,7E)- (-)-3-hydroxy-5,6-epoxy-7-megastigmene-9-one（4），(3S,5S,6R,7E)-(+)-3-hydroxy- 5,6-epoxy-7-megastigmene-9-one（5），Dehydrovomifoliol（6），(3R)-(-)-4-[(2R,4S)-4- acetoxy-2-hydroxy-2,6,6-trimethylcyclohexylidene]-3-buten-2-one（7），2,3,3′-三溴-4,4′,5,5′-四羟基-1′-乙氧甲基双苯基甲烷（8），2,2′,3,3′-四溴-4,4′,5,5′-四羟基双苯基甲烷（9），3-溴-4,5-二羟基苯甲醛（10），2,3-二溴-4,5-二羟基苯甲基甲醚（11），2,3-二溴-4,5-二羟基苯甲醇（12），N, N-二甲基酪胺（13），4-羟基苯甲酸乙酯（14），4-羟基苯甲基乙醚（15），4-羟基苯乙基乙酯（16），4-羟基苯乙酸甲酯（17），4-羟基苯甲醛（18），豆甾-4-烯-3-酮（19），胆甾-4-烯-3-酮（20），胆甾醇（21），尿嘧啶（22），尿嘧啶核苷（23），腺嘌呤核苷（24），丁二酸（25），5-羟基-4-甲基-5-戊基-2,5-二氢呋喃-2-酮（26）。其中化合物1、2为新化合物，化合物3为新天然产物，所有化合物均为首次从该属海藻中分离得到。通过 MTT 法对部分单体化合物进行了肿瘤细胞毒活性筛选, 结果表明，化合物8、9、10、12对筛选的所有细胞株均有较强细胞毒活性，化合物11对人肺癌细胞株（A549）、人肝癌细胞株（Bel 7402）、人结肠癌细胞株（HCT-8）有一定细胞毒活性。通过研究单体化合物对小鼠腹腔巨噬细胞TNF-分泌的影响，对其进行抗炎活性筛选，结果表明，化合物8、9、11、13、17、23、24、25对小鼠腹腔巨噬细胞TNF-分泌表现出明显的抑制作用。 从采自山东荣成镆铘岛的红藻小珊瑚藻（Corallina pilulifera）的乙酸乙酯萃取物中分离得到16个单体化合物，通过波谱学方法鉴定化合物结构14个（另外2个正在鉴定中），分别为2α-乙氧酰基-2β-羟基-A-降胆甾-5-烯-4-酮（27），胆甾-4-烯-3-酮（28），胆甾醇（29），3β-羟基-胆甾-5,24(28)-二烯-7-酮（30），2α-羟基-胆甾-4-烯-3-酮（31），6α-羟基-胆甾-4-烯-3-酮（32），3β-羟基-胆甾-5-烯-7-酮（33），(E)-phytol epoxide（34），Phytenal（35），3,7,11,15- tetramethyl-hexadec-2-en-1-oll（Phytol）（36），Loloilide（37），(3S,5R,6S,7E)-(-)-3-hydroxy-5,6-epoxy-7- megastigmene-9-one（38），Dehydrovomifoliol（39），4-羟基苯甲醛（40）。其中，化合物 31为新天然产物，化合物27为首次从植物中分离得到，所有化合物均为首次从该种海藻中分离得到。通过 MTT 法对分离得到的单体化合物进行了肿瘤细胞毒活性筛选,化合物27和化合物32对筛选的所有肿瘤细胞株均有细胞毒活性，且化合物27对人胃癌细胞株（BGC-823）、人结肠癌细胞株（HCT-8）和人卵巢癌细胞株（A2780）具有中等强度抑制活性。化合物28、化合物31和化合物33对人肝癌细胞株（Bel 7402）、人结肠癌细胞株（HCT-8）和人卵巢癌细胞株（A2780）有一定细胞毒活性。 从采自广西北海涠洲岛的多管藻Polysiphonia sp.的乙酸乙酯萃取物中分离得到6个单体化合物，通过波谱学方法鉴定化合物结构5个（另外1个仍在鉴定），分别为胆甾醇（41），3,7,11,15-tetramethyl-hexadec-2-en-1-ol（Phytol）（42），3-吲哚甲醛（43），4-羟基苯甲醛（44），4-羟基苯甲酸（45）。 对山东青岛沿海的松节藻 (Rhodomela confervoides) 乙醇提取物进行了初步的体内抗糖尿病活性研究，采用链脲佐菌素诱导的2型糖尿病（STZ-DM）大鼠模型对其进行体内降糖实验，结果发现，松节藻乙醇提取物在糖尿病大鼠体内不仅具有显著的降血糖作用，且呈现良好的量–效关系，而且能够纠正糖尿病引发的物质代谢紊乱，增加体重，提高试验动物的成活率，因此具有良好的应用开发前景。

栉孔扇贝CfLITAF基因的克隆与表达分析

关于无脊椎动物中是否存在细胞因子一直都存在着异议。从细胞因子本身入手，运用细胞生物学和免疫学手段，已经在软体动物、节肢动物和棘皮动物等无脊椎动物中证实了高等动物细胞因子样活性物质的存在，然而利用分子生物学手段至今没有得到任何核苷酸或蛋白序列信息，而从与细胞因子相关的分子如调控其表达的转录因子入手来研究无脊椎动物中的细胞因子样物质的存在，或许会得到意想不到的惊喜。 最近从人的单核细胞系THP-1中分离纯化出一种新型的转录因子，它可以被LPS诱导表达，产生的蛋白在TNF-α的表达过程中起着非常重要的作用，因而命名为LPS-induced TNF-α factor（LITAF）。随后该基因在小鼠和鸡中也被克隆分离出来，其编码的蛋白已经证实在TNF-α的表达过程中起着不可或缺的作用。迄今为止，在无脊椎动物中还没有相关同源基因的报道。 本研究采用大规模EST测序方法，结合锚定PCR技术从栉孔扇贝体内克隆到了高等动物LITAF基因的同源基因CfLITAF的全长cDNA序列。该cDNA全长为1240bp，其中5' 非编码区（UTR）为112 bp；开放阅读框（Open Reading Frame, ORF）包括450 bp，编码149个氨基酸残基，该多肽的理论分子量为16.08 kDa，等电点为6.77；3' UTR为678bp，包含一个poly A尾巴。SMART结构域预测发现CfLITAF蛋白含有一个保守的LITAF结构域。实时定量PCR检测CfLITAF基因在栉孔扇贝主要免疫器官中的表达分布情况，发现在所检测的六种组织血细胞、外套膜、肌肉、心、腮、性腺中均能检测到CfLITAF基因转录本的不同丰度的表达。血淋巴和肌肉中的表达量相差不大，而在心、外套膜、腮和性腺中的表达量要高于血淋巴和肌肉中的表达量，分别是血中表达量的2.45、2.82、9.23和24.93倍。 为了验证其表达量是否会受到LPS的诱导，利用QRT-PCR（quantitative real time PCR）检测了CfLITAF基因在受到LPS和PGN刺激后在血细胞中的表达规律。结果如下：在LPS刺激后3h，CfLITAF的表达量显著上调，达到了原初水平的1.5倍，随着时间的延长，其表达量逐渐恢复到刺激前水平；在用PGN刺激血细胞后的9个小时内均没有检测到CfLITAF基因mRNA表达量的显著变化。实验中所用血细胞为同一批原代培养的栉孔扇贝血淋巴细胞，细胞活力通过台盼蓝拒染实验测定。 CfLITAF基因的克隆与表达分析，不仅为进一步认识栉孔扇贝的免疫防御机制提供了实验参考，更重要的是为无脊椎动物中细胞因子样物质的研究提供了一个分子水平上的线索，为无脊椎动物中细胞因子样物质的研究奠定了理论基础。

Immunomodulation and antitumor activity of kappa-carrageenan oligosaccharides

The modulation of carrageenan oligosaccharides from Kappaphycus striatum on the immune system in S 180-bearing mice was investigated. The mice inoculated with S180 cell suspension were treated p.o. with carrageenan oligosaccharides (50, 100 and 200 mu g/g) for 14 days. The effects of carrageenan oligosaccharides on transplantable tumors and macrophage phagocytosis, quantitative hemolysis of sheep red blood cells (QHS),. lymphocyte proliferation, the activity of natural killer cells (NK), production of interleukin-2 (IL-2) and tumor necrosis factor-alpha (TNF-alpha) were studied. Carrageenan oligosaccharides could significantly inhibit the growth of transplantable sarcoma S180 and increase macrophage phagocytosis, the form of antibody secreted by spleen cells, spleen lymphocyte proliferation, NK cells activity, serumal IL-2 and TNF-alpha level in S 180-bearing mice. Considering all these results, it is suggested that carrageenan oligosaccharides exert their antitumor effect by promoting the immune system. (c) 2005 Elsevier Ireland Ltd. All rights reserved.

Proteasome and NF-kappa B inhibiting phaeophytins from the green alga Cladophora fascicularis

Chemical examination of the green alga Cladophora fascicularis resulted in the isolation and characterization of a new porphyrin derivative, porphyrinolactone (1), along with five known phaeophytins 2-6 and fourteen sterols and cycloartanes. The structure of 1 was determined on the basis of spectroscopic analyses and by comparison of its NMR data with those of known phaeophytins. Compounds 1-6 displayed moderate inhibition of tumor necrosis factor alpha (TNF-alpha) induced nuclear factor-kappa B (NF-kappa B) activation, while 2 and 4 displayed potential inhibitory activity toward proteasome chymotripsin-like activation. The primary structure-activity relationship was also discussed.

塞隆骨提取物对CFA诱导活化的小鼠腹腔巨噬细胞功能的影响

目的：研究塞隆骨提取物对弗氏完全佐剂诱导活化的腹腔巨噬细胞的免疫抑制作用。方法：小鼠腹腔注射弗氏完全佐剂诱导腹腔巨噬细胞活化并回收，体外加入LPS及IFN-γ刺激培养巨噬细胞，利用酶联免疫法测定培养上清中细胞因子（IL-1β、IL-6、IL-12p40、TNF-α水平。结果：塞隆骨水提物及90％醇沉部分体内给药均能够能显著抑制弗氏完全佐剂诱导的巨噬细胞向腹腔的浸润，能抑制巨噬细胞在LPS及IFN-γ刺激下生成细胞因子（IL-12p40、IL-1β、IL-6、TNF-α。结论：塞隆骨提取物对巨噬细胞功能有一定程度的影响，能够抑制其产生炎症因子，可能是其治疗类风湿性关节炎的作用机理之一。

塞隆骨提取物对牛Ⅱ型胶原诱导的小鼠关节炎的治疗作用及机制研究

目的 了解塞隆骨水提物（SLG—B）对胶原诱导的小鼠关节炎的治疗作用及治疗机制。方法 利用牛Ⅱ型胶原诱导DBA／1小鼠类风湿性关节炎模型即CIA。SLG—B口服给药观察小鼠关节炎指数的变化情况，体外培养关节炎小鼠脾细胞及巨噬细胞，ELISA法测定IL-12、IL-2、IFN-γ TNF-α几种细胞因子。RT-PCR测定SLG-B对关节炎小鼠巨噬细胞IL-1β、IL-6、iNOS mRNA表达的影响。结果 SLG-B能明显的抑制牛Ⅱ型胶原诱导关节炎的发生，能够减轻关节炎的各种症状。SLG-B在加抗原和不加抗原的情况下都能够明显的抑制关节炎小鼠脾细胞的增殖同时发现SLG-B能够抑制IL-2、IFN-1、L-12p40、TNF-α细胞因子的产生。还能够抑制小鼠腹腔巨噬细胞IL-1、IL-6及iNOS mRNA的表达。这可能是SLG—B在小鼠关节炎中表现治疗效果的分子基础。结论 SLG—B对小鼠关节炎有很好的治疗效果，其作用机制主要是通过抑制巨噬细胞及脾细胞产生炎性细胞因子和抑制炎性细胞因子mRNA的表达来达到治疗类风湿性关节炎的作用。

Endothelial cells release phenotypically and quantitatively distinct microparticles in activation and apoptosis

Background: Endothelial cells (EC) shed endothelial microparticles (EMP) in activation and apoptosis. Objectives: We compared the antigenic expression of EMP species released during activation as compared to apoptosis, in three cell lines. Methods: EC from renal and brain microvascular (MiVEC) and coronary macrovascular (MaVEC) origin were incubated with TNF-alpha to induce activation, or deprived of growth factors to induce apoptosis. Antigens expressed on EMP and EC were assayed flow cytometrically and included constitutive markers (CD31, CD51/61, CD105), inducible markers (CD54, CD62E and CD106), and annexin V binding. Results: It was found that in apoptosis, constitutive markers in EMP were markedly increased (CD31>CD105), with a concomitant decrease in expression in EC. Annexin V EC surface binding and annexin V+ EMP were more sharply increased in apoptosis than in activation. In contrast, in activation, inducible markers in EMP were markedly increased in both EMP and EC (CD62E>CD54>CD 106). Coronary MaVEC released significantly less EMP than MiVEC. Conclusion: EC release qualitatively and quantitatively distinct EMP during activation compared to apoptosis. Analysis of EMP phenotypic signatures may provide clinically useful information on the status of the endothelium. (C) 2003 Elsevier Science Ltd. All rights reserved.

Neuroprotective and immunomodulatory properties of the new PPARγ agonist MDG548: an in vitro and in vivo study in PD models

Neuroinflammation is a key component of Parkinson’s disease (PD) neuropathology. Skewed microglia activation with pro-inflammatory prevailing over anti-inflammatory phenotypes may contribute to neurotoxicity via the production of cytokines and neurotoxic species. Therefore, microglia polarization has been proposed as a target for neuroprotection. The peroxisome proliferator-activated receptor gamma (PPARγ) is expressed in microglia and peripheral immune cells, where it is involved in macrophages polarization and in the control of inflammatory responses, by modulating gene transcription. Several studies have shown that PPARγ agonists are neuroprotective in experimental PD models in rodents and primates. however safety concerns have been raised about PPARγ agonists thiazolidinediones (TZD) currently available, prompting for the development of non-TZD compounds. Aim of this study was to characterize a novel PPARγ agonist non TZD, MDG548, for its potential neuroprotective effect in PD models and its immunomodulatory activity as the underlying mechanism of neuroprotection. The neuroprotective activity of MDG548 was assessed in vivo in the subacute MPTP model and in the chronic MPTP/probenecid (MPTPp) model of PD. MDG548 activity on microglia activation and phenotype was investigated in the substantia nigra pars compacta (SNc) via the evaluation of pro- (TNF-α and iNOS) and anti-inflammatory (CD206) molecules, with fluorescent immunohistochemistry. Moreover, cultured murine microglia MMGT12 were treated with MDG548 in association with the inflammagen LPS, pro- and anti-inflammatory molecules were measured in the medium by ELISA assay and phagocytosis was evaluated by fluorescent immunohistochemistry for CD68. MDG548 arrested dopaminergic cells degeneration in the SNc in both the subacute MPTP and the chronic MPTPp models of PD, and reverted MPTPp-induced motor impairment. Moreover, MDG548 reduced microglia activation, iNOS and TNF-α production, while induced CD206 in microglia. In cultured unstimulated microglia, LPS increased TNF-α production and CD68 expression, while decreased CD206 expression. MDG548 reverted LPS effect on TNF-α and CD206 restoring physiological levels, while strongly increased CD68 expression. Results suggest that the PPARγ agonist MDG548 is neuroprotective in experimental models of PD. MDG548 targets microglia polarization by correcting the imbalance between pro- over antiinflammatory molecules, offering a novel immunomodulatory approach to neuroprotection.

Gastroprotective potential of Buddleja scordioides Kunth: Effects into the modulation of antioxidant enzymes and inflammation markers in an in vivo model

Ethnopharmacological relevance: A common plant used to treat several gastric disorders is Buddleja scordioides Kunth,commonly known as salvilla. Aim of thes tudy: To detect inflammatory markers,in order to evaluate the gastroprotective potential of salvilla infusions,as this could have beneficial impact on the population exposed to gastric ulcers and colitis. Materials and methods: The present work attempted infusions were prepared with B. scordioides (1% w/w) lyophilized and stored.Total phenolic content and GC–MS analysis were performed. Wistar rats were divided into five groups a negative vehicle control,an indomethacin group,and three experimental groups,named preventive,curative,and suppressive. All rats were sacrificed under deep ether anesthesia(6h)after the last oral administration of indomethacin/infusion.The rat stomachs were promptly excised,weighed,and chilled in ice-cold and 0.9%NaCl.Histological analysis,nitrites quantification and immunodetection assays were done. Results: B.scordioides infusions markedly reduced the visible hemorrhagic lesions induced byindomethacin in rat stomachs,also showed down-regulation of COX2, IL-8 and TNFα and up-regulation of COX-1with a moderate down-regulation of NFkB and lower amount of nitrites.However,this behavior was dependent on the treatment,showing most down-regulation of COX-2,TNFα and IL-8 in the curative treatment;more down-regulation of NF-kB in the preventive treatment;and more up-regulation of COX-1 for the suppressor and preventive treatments. Conclusion: The anti-inflammatory potential of B. scordioides infusions could be related with the presence of polyphenols as quercetin in the infusion and how this one is consumed.

Investigation of toll-like receptor tolerance in the regulation of inflammation

Inflammation is a complex and highly organised immune response to microbes and tissue injury. Recognition of noxious stimuli by pathogen recognition receptor families including Toll-like receptors results in the expression of hundreds of genes that encode cytokines, chemokines, antimicrobials and regulators of inflammation. Regulation of TLR activation responses is controlled by TLR tolerance which induces a global change in the cellular transcriptional expression profile resulting in gene specific suppression and induction of transcription. In this thesis the plasticity of TLR receptor tolerance is investigated using an in vivo, transcriptomics and functional approach to determine the plasticity of TLR tolerance in the regulation of inflammation. Firstly, using mice deficient in the negative regulator of TLR gene transcription, Bcl-3 (Bcl-3-/-) in a model of intestinal inflammation, we investigated the role of Bcl-3 in the regulation of intestinal inflammatory responses. Our data revealed a novel role for Bcl-3 in the regulation of epithelial cell proliferation and regeneration during intestinal inflammation. Furthermore this data revealed that increased Bcl-3 expression contributes to the development of inflammatory bowel disease (IBD). Secondly, we demonstrate that lipopolysaccharide tolerance is transient and recovery from LPS tolerance results in polarisation of macrophages to a previously un-described hybrid state (RM). In addition, we identified that RM cells have a unique transcriptional profile with suppression and induction of genes specific to this polarisation state. Furthermore, using a functional approach to characterise the outcomes of TLR tolerance plasticity, we demonstrate that cytokine transcription is uncoupled from cytokine secretion in macrophages following recovery from LPS tolerance. Here we demonstrate a novel mechanism of regulation of TLR tolerance through suppression of cytokine secretion in macrophages. We show that TNF-α is alternatively trafficked towards a degradative intracellular compartment. These studies demonstrate that TLR tolerance is a complex immunological response with the plasticity of this state playing an important role in the regulation of inflammation.

A study of diet and health in the elderly; the gut microbiota as a source of bioactive agents

The global proportion of older persons is increasing rapidly. Diet and the intestinal microbiota independently and jointly contribute to health in the elderly. The habitual dietary patterns and functional microbiota components of elderly subjects were investigated in order to identify specific effector mechanisms. A study of the dietary intake of Irish community-dwelling elderly subjects showed that the consumption of foods high in fat and/or sugar was excessive, while consumption of dairy foods was inadequate. Elderly females typically had a more nutrient- dense diet than males and a considerable proportion of subjects, particularly males, had inadequate intakes of calcium, magnesium, vitamin D, folate, zinc and vitamin C. The association between dietary patterns, glycaemic index and cognitive function was also investigated. Elderly subjects consuming ‘prudent’ dietary patterns had better cognitive function compared to those consuming ‘Western’ dietary patterns. Furthermore, fully-adjusted regression models revealed that a high glycaemic diet was associated with poor cognitive function, demonstrating a new link between nutrition and cognition. An extensive screening study of the elderly faecal-derived microbiota was also undertaken to examine the prevalence of antimicrobial production by intestinal bacteria. A number of previously characterised bacteriocins were isolated (gassericin T, ABP-118, mutacin II, enterocin L-50 and enterocin P) in this study. Interestingly, a Lactobacillus crispatus strain was found to produce a potentially novel antimicrobial compound. Full genome sequencing of this strain revealed the presence of three loci which exhibited varying degrees of homology with the genes responsible for helveticin J production in Lb. helveticus. An additional study comparing the immunomodulatory capacity of ‘viable’ and ‘non-viable’ Bifidobacterium strains found that Bifidobacterium-fermented milks (BFMs) containing ‘non-viable’ cells could stimulate levels of IL-10 and TNF-α in a manner similar to those stimulated by BFMs containing ‘viable’ cells in vitro.

Investigation of p75 neurotrophin receptor and the role of its post-translational modifications in tumour cell motility and invasiveness

The p75 neurotrophin receptor (p75NTR) is a member of the tumour necrosis factor superfamily, which relies on the recruitment of cytosolic protein partners - including the TNF receptor associated factor 6 (TRAF6) E3 ubiquitin ligase - to produce cellular responses such as apoptosis, survival, and inhibition of neurite outgrowth. Recently,p75NTR was also shown to undergo γ-secretase-mediated regulated intramembrane proteolysis, and the receptor ICD was found to migrate to the nucleus where it regulates gene transcription. Moreover, γ-secretase-mediated proteolysis was shown to be involved in glioblastoma cell migration and invasion. In this study we report that TRAF6-mediated K63-linked polyubiquitination at multiple or alternative lysine residues influences p75NTR-ICD stability in vitro. In addition, we found that TRAF6-mediated ubiquitination of p75NTR is not influenced by inhibition of dynamin. Moreover, we report beta-transducin repeats-containing protein (β-TrCP) as a novel E3- ligase that ubiquitinates p75NTR, which is independent of serine phosphorylation of the p75NTR destruction motif. In contrast to its influence on other substrates, co-expression of β-TrCP did not reduce p75NTR stability. We created U87-MG glioblastoma cell lines stably expressing wild type, γ-secretaseresistant and constitutively cleaved receptor, as well as the ICD-stabilized mutant K301R. Interestingly, only wild-type p75NTR induces increased glioblastoma cell migration, which could be reversed by application of γ-secretase inhibitor. Microarray and qRT-PCR analysis of mRNA transcripts in these cell lines yielded several promising genes that might be involved in glioblastoma cell migration and invasion, such as cadherin 11 and matrix metalloproteinase 12. Analysis of potential transcription factor binding sites revealed that transcription of these genes might be regulated by well known p75NTR signalling cascades such as NF-κB or JNK signalling, which are independent of γ-secretase-mediated cleavage of the receptor. In contrast, while p75NTR overexpression was confirmed in melanoma cell lines and a patient sample of melanoma metastasis to the brain, inhibition of γ-secretase did not influence melanoma cell migration. Collectively, this study provides several avenues to better understand the physiological importance of posttranslational modifications of p75NTR and the significance of the receptor in glioblastoma cell migration and invasion.