Tumour islet Foxp3+ T-cell infiltration predicts poor outcome in nonsmall cell lung cancer

The impact of host immunity on outcome in nonsmall cell lung cancer (NSCLC) is controversial. We examined the relationship between lymphoid infiltration patterns in NSCLC and prognosis. Tumour- and stroma-infiltrating CD3+, CD8+ and forkhead box P3 (Foxp3)+ T-lymphocytes were identified using immunohistochemistry and a novel image analysis algorithm to assess total, cytotoxic and regulatory T-lymphocyte counts, respectively, in 196 NSCLC cases. The median cell count was selected as a cut-point to define patient subgroups and the ratio of the corresponding tumour islet:stroma (TI/S) counts was determined. There was a positive association between overall survival and increased CD8+ TI/S ratio (hazard ratio (HR) for death 0.44, p<0.001) but an inverse relationship between Foxp3+ TI/S ratio and overall survival (HR 4.86, p<0.001). Patients with high CD8+ islet (HR 0.48, p<0.001) and Foxp3+ stromal (HR 0.23, p<0.001) counts had better survival, whereas high CD3+ and CD8+ stromal counts and high Foxp3+ islet infiltration conferred a worse survival (HR 1.55, 2.19 and 3.14, respectively). By multivariate analysis, a high CD8+ TI/S ratio conferred an improved survival (HR 0.48, p=0.002) but a high Foxp3+ TI/S ratio was associated with worse survival (HR 3.91, p<0.001). Microlocalisation of infiltrating T-lymphocytes is a powerful predictor of outcome in resected NSCLC.

Aspects of tautomerism. Part II. Reactions of the pseudo-acid chloride of o-benzoylbenzoic acid with nucleophiles

Reactions of fourteen nucleophiles with the pseudo-acid chloride of o-benzoylbenzoic acid in two solvents have been studied. The nucleophiles that react primarily at the tetrahedral carbon atom to give pseudo derivatives, are weaker than those that react at the carbonyl carbon atom causing opening of the lactone ring. An explanation for this phenomenon is advanced.

Sensitivity of the simulated precipitation to changes in convective relaxation time scale

The paper describes the sensitivity of the simulated precipitation to changes in convective relaxation time scale (TAU) of Zhang and McFarlane (ZM) cumulus parameterization, in NCAR-Community Atmosphere Model version 3 (CAM3). In the default configuration of the model, the prescribed value of TAU, a characteristic time scale with which convective available potential energy (CAPE) is removed at an exponential rate by convection, is assumed to be 1 h. However, some recent observational findings suggest that, it is larger by around one order of magnitude. In order to explore the sensitivity of the model simulation to TAU, two model frameworks have been used, namely, aqua-planet and actual-planet configurations. Numerical integrations have been carried out by using different values of TAU, and its effect on simulated precipitation has been analyzed. The aqua-planet simulations reveal that when TAU increases, rate of deep convective precipitation (DCP) decreases and this leads to an accumulation of convective instability in the atmosphere. Consequently, the moisture content in the lower-and mid-troposphere increases. On the other hand, the shallow convective precipitation (SCP) and large-scale precipitation (LSP) intensify, predominantly the SCP, and thus capping the accumulation of convective instability in the atmosphere. The total precipitation (TP) remains approximately constant, but the proportion of the three components changes significantly, which in turn alters the vertical distribution of total precipitation production. The vertical structure of moist heating changes from a vertically extended profile to a bottom heavy profile, with the increase of TAU. Altitude of the maximum vertical velocity shifts from upper troposphere to lower troposphere. Similar response was seen in the actual-planet simulations. With an increase in TAU from 1 h to 8 h, there was a significant improvement in the simulation of the seasonal mean precipitation. The fraction of deep convective precipitation was in much better agreement with satellite observations.

Vänner, kolleger och gynnare : Namngivningen av de finska fästningsverken under Augustin Ehrensvärds tid

Under 1700-talets andra hälft hörde Sveriges nya fästningar i öst (Helsingfors, Sveaborg, Lovisa och Svartholm) till rikets största satsningar. Fästningsprojektet leddes med undantag av ett par avbrott av Augustin Ehrensvärd (1710 1772). När arbetet tog fart namngavs de enskilda fästningsverken i så gott som alla fall efter samtida personer. Under Ehrensvärds tid tillämpades denna namngivning på omkring femtio av Sveaborgs och Helsingfors fästningsverk samt på Lovisas och Svartholms totalt aderton verk. Genom personerna de knöts till berättar namnen en hel del om Augustin Ehrensvärds samtid och omvärld. Hur de gjorde det är denna avhandlings huvudfråga. Källmaterialet utgörs av relationsritningar och brev, medan de teoretiska ramarna står att finna i nätverksteori och onomastiska teorier om namnmönster. Ehrensvärd förklarade sin namngivningspraxis för sin överordnade, tronföljaren Adolf Fredrik, 1749 i samband med att Gustavssvärd med fästningsverk namngavs: tanken var att namnge bastioner efter de som bidragit till arbetets framgång och att namnge utanverk efter officerare vid fästningsbygget. Innebörden av Ehrensvärds ord framgår ur namnbeståndet. De största grupperna består av ämbetsmän och militärer. Med de som bidragit till arbetets framgång avsågs sålunda den lokala eliten: landshövdingar som involverats i fästningsbygget samt högre och lägre militärer som tjänstgjorde vid fästningarna. Redan från början syns en klar hierarki i namngivningen. Medan landshövdingarna och de högre militärerna tillägnades bastioner, fick de lägre officerarna se mindre fästningsverk namngivna efter sig, helt i enlighet med Ehrensvärds egen beskrivning. Utanför de ovan nämnda grupperna, hedrades en hel del personer som inte konkret hade engagerats i fästningsbygget. Denna namngivning kan förklaras å ena sidan inom ramen för Ehrensvärds sociala nätverk och å andra sidan mot bakgrund av riksdagspolitiken i frihetstidens Sverige. Av de två förklaringsmodeller bör Ehrensvärds personliga vänskaper ses som en bidragande orsak, medan de politiska motiven utgjorde en avgörande orsak. Som en del av Ehrensvärds nätverk kan de gynnare ses som hade stöttat Ehrensvärd under hans karriär samt hans närmaste medarbetare vid fästningsbygget, ofta officerer han själv handplockat. Namngivningens politiska aspekt syns i det stora antalet riksråd som tillägandes bastionnamn. Vid sidan om riksråden hedrades också talmän vid de samtida riksdagarna. En komparativ studie i namngivningen av fästningsverk vid samtida och äldre svenska fästningar framhäver Ehrensvärd som en innovativ namngivare. Fästningsverk namngivna efter kungligheter verkar ha varit en norm, som också Ehrensvärd anknöt till genom ett fåtal namn. Däremot var namn efter personer inte vanliga, vilket gav den Ehrensvärdska namngivningen en förhållandevis stark anknytning till samtiden. Denna aspekt bekräftas om namnen ses mot bakgrund av 1700-talets uppfattning om ära och äregirighetens samhälleliga nytta. I denna uppfattning syns bakgrunden till förekomsten av personer med både hög och låg status i Ehrensvärds namngivning. Sammanfattningsvis speglar namnen på de finska fästningsverken sin samtid genom den byråkratiska, militära och politiska elit de representerar samt genom motiveringen till dem.

Covalent attachment of two important dicopper(II) systems in a one-dimensional polymeric chain: An x-ray structure of [Cu2(en)2(OH)2·Cu2(O2CMe)4](PF6)2·0.5EtOH]α showing the shortest Cucdots, three dots, centeredCu Distance in the tetraacetato core

Reaction of Cu2(O2CMe)4(H2O)2 with 1,2-diaminoethane(en) in ethanol, followed by the addition of NH4PF6, led to the formation of a covalently linked 1D polymeric copper(II) title complex showing alternating [Cu2(en)2(OH)22+] and [Cu2(O2CMe)4] units in the chain and the shortest Cucdots, three dots, centeredCu separation of 2.558(2) Å in the tetraacetato core.

Crystal structure of Boc-LAla-Delta Phe-Delta Phe-Delta Phe-Delta Phe-NHMe: a left-handed helical peptide

alpha,beta-Dehydrophenylalanine residues constrain the peptide backbone to beta-bend conformation. A pentapeptide containing four consecutive (Delta Phe) residues has been synthesised and crystallised. The peptide Boc-LAla-Delta Phe-Delta Phe-Delta Phe-Delta Phe-NHMe (C45H46N6O7, MW = 782.86) was crystallised from an acetonitrile/methanol mixture. The crystal belongs to the orthorhombic space group P2(1)2(1)2(1) With a = 19.455(6), b = 20.912(9), c = 11.455(4) Angstrom and Z = 4. The X-ray (MoKalpha, lambda = 0.7107 Angstrom) intensity data were collected using the Rigaku-AFC7 diffractrometer. The crystal structure was determined by direct methods and refined using the least-squares technique, R = 8.41% for 1827 reflections with \F-o\ > 4 sigma\F-o\. The molecule contains the largest stretch of consecutive dehydrophenylalanine residues whose crystal structure has been determined so far. The peptide adopts left-handed 3(10)-helical conformation despite the presence of LAla at the N-terminus. The mean phi, psi values, averaged across the last four residues are 56.8 degrees and 17.5 degrees, respectively. There are four 4-->1 intramolecular hydrogen bonds, characteristic of the 3(10)-helix. In the crystal each molecule interacts with four crystallographically symmetric molecules with one hydrogen bond each.

Role of PbO in lithium ion transport in Li2O-PbO-B2O3 glasses

Abstract: A wide range of compositions of grasses in the ternary Li2O-PbO-B2O3 glass system was prepared, and de and ac conductivity measurements were carried out on these glasses. The presence of lead leads to a decrease in de conductivities and an increase in the activation energies. This is likely to be due to the increase of the partial charges on the oxygen atoms and to the presence of the lone pair on the Pb atom; both of these factors impede lithium ion motion. The ac conductivity and dielectric behavior of these glasses support such a conjecture. (C) 2000 Elsevier Science Ltd.

A checking method for probabilistic seismic-hazard assessment: case studies on three cities

The conventional Cornell's source-based approach of probabilistic seismic-hazard assessment (PSHA) has been employed all around the world, whilst many studies often rely on the use of computer packages such as FRISK (McGuire FRISK-a computer program for seismic risk analysis. Open-File Report 78-1007, United States Geological Survey, Department of Interior, Washington 1978) and SEISRISK III (Bender and Perkins SEISRISK III-a computer program for seismic hazard estimation, Bulletin 1772. United States Geological Survey, Department of Interior, Washington 1987). A ``black-box'' syndrome may be resulted if the user of the software does not have another simple and robust PSHA method that can be used to make comparisons. An alternative method for PSHA, namely direct amplitude-based (DAB) approach, has been developed as a heuristic and efficient method enabling users to undertake their own sanity checks on outputs from computer packages. This paper experiments the application of the DAB approach for three cities in China, Iran, and India, respectively, and compares with documented results computed by the source-based approach. Several insights regarding the procedure of conducting PSHA have also been obtained, which could be useful for future seismic-hazard studies.

Potentiometric determination of the Gibbs free energy of formation of cadmium and magnesium chromites

The standard Gibbs free energy of formation of magnesium and cadmiumchromites have been determined by potentiometric measurements on reversiblesolid-state electrochemical cells [dformula (Au-5%Cd, , Au-5%Cd; Pt, + , CaO-ZrO[sub 2], + ,Pt; CdO, , CdCr[sub 2]O[sub 4] + Cr[sub 2]O[sub 3])] in the temperature range 500°–730°C, and [dformula Pt, Cr + Cr[sub 2]O[sub 3]/Y[sub 2]O[sub 3]-ThO[sub 2]/Cr + MgCr[sub 2]O[sub 4] + MgO, Pt] in the temperature range 800°–1200°C. The temperature dependence of the freeenergies of formation of the ternary compounds can be represented by theequations [dformula CdO(r.s.) + Cr[sub 2]O[sub 3](cor) --> CdCr[sub 2]O[sub 4](sp)] [dformula Delta G[sup 0] = - 42,260 + 7.53T ([plus-minus]400) J] and [dformula MgO(r.s.) + Cr[sub 2]O[sub 3](cor) --> MgCr[sub 2]O[sub 4](sp)] [dformula Delta G[sup 0] = - 45,200 + 5.36T ([plus-minus]400) J] The entropies of formation of these spinels are discussed in terms of cationdisorder and extent of reduction of Cr3+ ions to Cr2+ ions. Thermodynamicdata on the chromates of cadmium and magnesium are derived by combiningthe results obtained in this study with information available in the literatureon high temperature, high pressure phase equilibria in the systems CdO-Cr2O3-O2 and MgO-Cr2O3-O2.

Physics-Based Band Gap Model for Relaxed and Strained 100] Silicon Nanowires

In this paper, we propose a physics-based simplified analytical model of the energy band gap and electron effective mass in a relaxed and strained rectangular 100] silicon nanowires (SiNWs). Our proposed formulation is based on the effective mass approximation for the nondegenerate two-band model and 4 x 4 Luttinger Hamiltonian for energy dispersion relation of conduction band electrons and the valence band heavy and light holes, respectively. Using this, we demonstrate the effect of the uniaxial strain applied along 100]-direction and a biaxial strain, which is assumed to be decomposed from a hydrostatic deformation along 001] followed by a uniaxial one along the 100]-direction, respectively, on both the band gap and the transport and subband electron effective masses in SiNW. Our analytical model is in good agreement with the extracted data using the extended-Huckel-method-based numerical simulations over a wide range of device dimensions and applied strain.

Computational investigations on covalent dimerization/oligomerization of polyacenes: Is it relevant to soot formation?

We have postulated a novel pathway that could assist in the nucleation of soot particles through covalent dimerization and oligomerizations of a variety of PAHs. DFT calculations were performed with the objective of obtaining the relative thermal stabilities and formation probabilities of oligomeric species that exploit the facile dimerization that is known to occur in linear oligoacenes. We propose that the presence of small stretches of linear oligoacence (tetracene or longer) in extended PAH, either embedded or tethered, would be adequate for enabling the formation of such dimeric and oligomeric adducts; these could then serve as nuclei for the growth of soot particles. Our studies also reveal the importance of p-stacking interactions between extended aromatic frameworks in governing the relative stabilities of the oligomeric species that are formed. (c) 2012 Wiley Periodicals, Inc.

MolBridge: a program for identifying nonbonded interactions in small molecules and biomolecular structures

Identification and analysis of nonbonded interactions within a molecule and with the surrounding molecules are an essential part of structural studies, given the importance of these interactions in defining the structure and function of any supramolecular entity. MolBridge is an easy to use algorithm based purely on geometric criteria that can identify all possible nonbonded interactions, such as hydrogen bond, halogen bond, cation-pi, pi-pi and van der Waals, in small molecules as well as biomolecules. The user can either upload three-dimensional coordinate files or enter the molecular ID corresponding to the relevant database. The program is available in a standalone form and as an interactive web server with Jmol and JME incorporated into it. The program is freely downloadable and the web server version is also available at http://nucleix.mbu.iisc.ernet.in/molbridge/index.php.

迎风紧致格式求解Hamilton-Jacobi方程

基于Hamilton-Jaeobi(H-J)方程和双曲型守恒律之间的关系,将三阶和五阶迎风紧致格式推广应用于求解H-J方程,建立了高精度的H-J方程求解方法.给出了一维和二维典型数值算例的计算结果,其中包括一个平面激波作用下的Richtmyer-Meshkov界面不稳定性问题.数值试验表明,在解的光滑区域该方法具有高精度,而在导数不连续的不光滑区域也获得了比较好的分辨效果.相比于同阶精度的WENO格式,本方法具有更小的数值耗散,从而有利于多尺度复杂流动的模拟中H-J方程的求解.

水平荷载作用下张力腿平台吸力式基础的物理模拟

介绍了张力腿平台吸力式基础在水平静载和循环动荷载作用下的离心模型试验。通过水平静载离心试验获得了基础的水平承载力。利用电磁式激振器模拟动荷载，研究在动荷载作用下吸力式基础的动力响应，并比较了荷载强度和基础刚度对基础动力响应的影响。分析结果表明，在动荷载作用下，泥面下1～2m深度内土体中孔压最大。当动荷载强度超过临界承载力时，基础周围土体有非常强的液化可能性。综合孔压变化和基础沉降规律分析基础有两种可能的破坏模式：振动最初1～2h内的液化破坏和长时间激振后沉降过大引发的问题。将单桶连接成多桶基础，增大基础刚度，在相同动载强度下，周围孔压增长和激振沉降均小于承受相同荷载条件的单桶基础。