Genetic variation of rougheye rockfish (Sebastes aleutianus) and shortraker rockfish (S. borealis) inferred from allozymes

Rougheye rockfish (Sebastes aleutianus) and shortraker rockfish (Sebastes borealis) were collected from the Washington coast, the Gulf of Alaska, the southern Bering Sea, and the eastern Kamchatka coast of Russia (areas encompassing most of their geographic distribution) for population genetic analyses. Using starch gel electrophoresis, we analyzed 1027 rougheye rockfish and 615 shortraker rockfish for variation at 29 proteincoding loci. No genetic heterogeneity was found among shortraker rockfish throughout the sampled regions, although shortraker in the Aleutian Islands region, captured at deeper depths, were found to be significantly smaller in size than the shortraker caught in shallower waters from Southeast Alaska. Genetic analysis of the rougheye rockfish revealed two evolutionary lineages that exist in sympatry with little or no gene f low between them. When analyzed as two distinct species, neither lineage exhibited heterogeneity among regions. Sebastes aleutianus seems to inhabit waters throughout the Gulf of Alaska and more southern waters, whereas S. sp. cf. aleutianus inhabits waters throughout the Gulf of Alaska, Aleutian Islands, and Asia. The distribution of the two rougheye rockfish lineages may be related to depth where they are sympatric. The paler color morph, S. aleutianus, is found more abundantly in shallower waters and the darker color morph, Sebastes sp. cf. aleutianus, inhabits deeper waters. Sebastes sp. cf. aleutianus, also exhibited a significantly higher prevalence of two parasites, N. robusta and T. trituba, than did Sebastes aleutianus, in the 2001 samples, indicating a possible difference in habitat and (or) resource use between the two lineages.

Reef Habitats in the Middle Atlantic Bight: Abundance, Distribution, Associated Biological Communities, and Fishery Resource Use

One particular habitat type in the Middle Atlantic Bight is not well recognized among fishery scientists and managers, although it is will known and used by recreational and commercial fisheries. This habitat consists of a variety of hard-surface, elevated relief "reef" or reef-like environments that are widely distributed across the predominantly flat or undulating, sandy areas of the Bight and include both natural rocky areas and man-made structures, e.g. shipwrecks and artificial reefs. Although there are natural rock and shellfish reefs in southern New England coastal waters and estuaries throughout the Bight, most reef habitats in the region appear to be man-made reef habitat modification/creation may be increasing. Very little effort has been devoted to the study of this habitat's distribution, abundance, use by living marine resources and associated biological communities (except on estuarine oyster reefs) and fishery value or management. This poorly studied and surveyed habitat can provide fish refuge from trawls and can be a factor in studies of the distribution and abundance of a variety of reef-associated fishery resources. This review provides a preliminary summary of information found on relative distribution and abundance of reef habitat in the Bight, the living marine resources and biological communities that commonly use it, threats to this habitat and its biological resources, and the value or potential value of artificial reefs to fishery or habitat and its biological resources, and the value or potential value of artificial reefs to fishery or habitat managers. The purpose of the review is to initiate an awareness among resource managers about this habitat, its role in resource management, and the need for research.

Pegada hídrica de aglomerados subnormais: o caso do Bairro Rocinha / Rio de Janeiro.

A água é essencial à manutenção da vida. No entanto, com as situações de estresse hídrico - disponibilidade hídrica inferior a 1.700 m per capita ao ano (FALKENMARK, 1989) - vivenciadas em diversos pontos do planeta, somadas ao acelerado crescimento da população mundial, os problemas relacionados ao uso da água tendem a aumentar. Neste contexto, a pegada hídrica (PH), que é um indicador de sustentabilidade ambiental, se torna uma importante ferramenta de gestão de recursos hídricos pois indica o consumo de água doce com base em seus usos. O presente trabalho objetiva mensurar a pegada hídrica em função das componentes industrial, doméstica e alimentar da população do bairro Rocinha, um aglomerado subnormal localizado no município do Rio de Janeiro. A pesquisa se deteve a um Estudo de Caso de 20 sub-bairros da comunidade. Sua abordagem foi quantitativa, contando com uma amostra de 203 domicílios, erro amostral de 7% e grau de confiança de 93%. Para tal, foi utilizada como ferramenta de cálculo o modelo Water Footprint Network do ano de 2005. Os resultados indicaram que, em média, a PH dos indivíduos que compõem a amostra é de 1715 m/ano per capita assim divididos: PH de consumo doméstico de água de 175 m/ano per capita (479 l/hab.dia); PH de produtos agrícolas igual a 1470 m/ano per capita, e PH de produtos industrializados de 70 m/ano per capita. Os resultados obtidos sugerem que os indivíduos da amostra com uma maior despesa mensal tendem a ter pegadas hídricas industrial e total também maiores.

Impacto do uso do solo no crescimento, limitação nutricional, taxonomia e variação estequiométrica do perifíton em rios tropicais

Os rios em todo o mundo estão ameaçados através da alteração do uso e cobertura do solo. Nesse contexto, o perifíton é sugerido como indicador biológico devido ao seu ciclo de vida curto, à comunidade autótrofa e à riqueza de espécies. O objetivo deste estudo foi identificar mudanças em parâmetros estruturais e funcionais da assembleia perifitica em relação aos diferentes tipos de cobertura do solo (pristino, perturbação intermediária e perturbado); em especial na limitação nutricional, crescimento e acúmulo, composição taxonômica e estequiometria da comunidade. O trabalho foi desenvolvido em três rios (Santa Maria, Itaperiti, Anil) da bacia Guapi-Macacu, RJ, Brasil. A limitação nutricional foi acessada através de Substratos Difusores de Nutrientes alocados in situ; estes substratos consistem em potes com agar-agar, enriquecidos com nutrientes (N, P, N+P), ou não (controle), que difundem até o filtro, servindo de substrato para o crescimento perifítico. Ainda, o crescimento foi acessado através da colonização de azulejos, amostrados em datas diferentes; na última data, a amostragem também foi feita para a verificação da composição taxonômica e estequiométrica da assembleia. Os resultados mostraram que a comunidade perifítica é limitada primariamente por luz nos pontos pristinos; já nos pontos perturbados, há limitação por nitrogênio ou fósforo, dependendo do uso do solo predominante agricultura com maior aporte de nitrogênio, causando limitação por fósforo, e pecuária com maior aporte de fósforo, causando limitação por nitrogênio. Os trechos perturbados apresentaram maior biomassa perifítica em termos de clorofila a; além disso, também mostraram as maiores taxas de crescimento da comunidade. Também, houve mudanças na composição taxonômica da comunidade no gradiente de perturbação, com o aumento de gêneros tolerantes à poluição e diminuição de gêneros não tolerantes e da diversidade e a equitabilidade. A intensidade luminosa foi determinante na presença dos táxons, e a concentração de fosfato, nas suas abundâncias. Por fim, as razões estequiométricas - C:N, C:P and N:P - diminuíram em função da concentração de nutrientes na água, indicando o potencial de remoção de nutrientes em córregos poluídos. O presente trabalho foi inovador na área limnológica devido à abordagem estequiométrica em conjunto com o grande número de outras variáveis biológicas. Em tempo, a dificuldade de separação dos efeitos das variáveis ambientais neste estudo in situ faz com que seja sugerido o uso de experimentos controlados em mesocosmos posteriormente

Construções geométricas por dobradura (ORIGAMI): Aplicações ao ensino básico

A presente dissertação tem o objetivo de mostrar a arte Origami sob um contexto matemático, apresentando um pequeno resumo dos aspectos história e o desenvolvimento do Origami ao longo do tempo e dando maior destaque às suas aplicações na matemática, com o emprego dos axiomas de Huzita e a proposta de ampliação deste conjunto de axiomas com a inclusão da circunferência no papel Origami. Com o uso das técnicas de dobraduras, este trabalho mostra várias aplicações do Origami na matemática, tais como: a solução de alguns problemas clássicos, a construção de polígonos, a demonstração da soma dos ângulos internos de um triângulo, cálculo de algumas áreas, a solução de alguns problemas de máximos e mínimos, seguidos dos conceitos matemático envolvidos em cada um deles. E a inclusão da circunferência no plano Origami permitiu ainda, o estudo das construções das cônicas por dobraduras

Construções geométricas por dobradura (ORIGAMI): aplicações ao ensino básico

A presente dissertação tem o objetivo de mostrar a arte Origami sob um contexto matemático, apresentando um pequeno resumo dos aspectos história e o desenvolvimento do Origami ao longo do tempo e dando maior destaque às suas aplicações na matemática, com o emprego dos axiomas de Huzita e a proposta de ampliação deste conjunto de axiomas com a inclusão da circunferência no papel Origami. Com o uso das técnicas de dobraduras, este trabalho mostra várias aplicações do Origami na matemática, tais como: a solução de alguns problemas clássicos, a construção de polígonos, a demonstração da soma dos ângulos internos de um triângulo, cálculo de algumas áreas, a solução de alguns problemas de máximos e mínimos, seguidos dos conceitos matemático envolvidos em cada um deles. E a inclusão da circunferência no plano Origami permitiu ainda, o estudo das construções das cônicas por dobraduras.

Utilização de imagem do sensor Aster para discriminação espectral de rochas carbonáticas aflorantes na região Noroeste do Estado do Rio de Janeiro

Este trabalho teve como objetivo geral avaliar o potencial das imagens do sensor ASTER, utilizando a região do infravermelho de ondas curtas (SWIR), para discriminação espectral de rochas carbonáticas aflorantes na região Noroeste do Estado do Rio de Janeiro, complementando produtos existentes de mapeamento geológico. As rochas carbonáticas servem de matéria-prima para produção de cimento, que atualmente apresenta forte demanda dado o crescimento de obras civis devido à expansão da infraestrutura do Estado do Rio de Janeiro. Este crescimento no consumo oferece desafios às companhias produtoras, tornando-se de vital importância a identificação de novas áreas para exploração de insumos para a indústria civil. Neste sentido, o carbonato tem sofrido grande pressão com relação a sua produção pois é a principal matéria-prima utilizada na fabricação do cimento. Imagens do sensor Aster vem sendo utilizadas na área da geologia com êxito, discriminando litologias e minerais como quartzo, óxido de ferro e calcita. Na região do intervalo de ondas entre 2,235-2,285 μm e 2,295-2,365 μm , as bandas 7 e 8 do sensor ASTER na região do SWIR, mostram-se adequadas para a identificação de minerais de calcita e dolomita. Como metodologia, foram aplicadas as técnicas de razões de bandas para separação de calcários e dolomitos e para a classificação espectral, foi utilizada a técnica SAM. Tornou-se como referência para a classificação espectral amostras de áreas de rochas carbonáticas aflorantes e espectros da biblioteca espectral da USGS. As classificações espectrais obtiveram resultados significativos na discriminação espectral das áreas carbonáticas, no entanto as técnicas de razões de bandas não obtiveram resultados suficientes para a discriminação de calcários e dolomitos. Para trabalhos futuros sugere-se a realização de trabalho de campo para a coleta de espectros, através da espectrorradiometria dos afloramentos dos carbonatos.

Assessment of natural resource conditions in and adjacent to Dry Tortugas National Park

This project characterized and assessed the condition of coastal water resources in the Dry Tortugas National Park (DRTO) located in the Florida Keys. The goal of the assessment was to: (1) identify the state of knowledge of natural resources that exist within the DRTO, (2) summarize the state of knowledge about natural and anthropogenic stressors and threats that affected these resources, and (3) describe strategies being implemented by DRTO managers to meet their resource management goals. The park, located in the Straits of Florida 113 km (70 miles) west of Key West, is relatively small (269 square kilometers) with seven small islands and extensive shallow water coral reefs. Significant natural resources within DRTO include coastal and oceanic waters, coral reefs, reef fisheries, seagrass beds, and sea turtle and bird nesting habitats. This report focuses on marine natural resources identified by DRTO resource managers and researchers as being vitally important to the Tortugas region and the wider South Florida ecosystem. Selected marine resources included physical resources (geology, oceanography, and water quality) and biological resources (coral reef and hardbottom benthic assemblages, seagrass and algal communities, reef fishes and macro invertebrates, and wildlife [sea turtles and sea-birds]). In the past few decades, some of these resources have deteriorated because of natural and anthropogenic factors that are local and global in scale. To meet mandated goals (Chapter 1), resource managers need information on: (1) the types and condition of natural and cultural resources that occur within the park and (2) the stressors and threats that can affect those resources. This report synthesizes and summarizes information on: (1) the status of marine natural resources occurring at DRTO; and (2) types of stressors and threats currently affecting those resources at the DRTO. Based on published information, the assessment suggests that marine resources at DRTO and its surrounding region are affected by several stressors, many of which act synergistically. Of the nine resource components assessed, one resource category – water quality – received an ecological condition ranking of "Good"; two components – the nonliving portion of coral reef and hardbottom and reef fishes – received a rating of "Caution"; and two components – the biotic components of coral reef and hardbottom substrates and sea turtles – received a rating of "Significant concern" (Table E-1). Seagrass and algal communities and seabirds were unrated for ecological condition because the available information was inadequate. The stressor category of tropical storms was the dominant and most prevalent stressor in the Tortugas region; it affected all of the resource components assessed in this report. Commercial and recreational fishing were also dominant stressors and affected 78% of the resource components assessed. The most stressed resource was the biotic component of coral reef and hardbottom resources, which was affected by 76% of the stressors. Water quality was the least affected; it was negatively affected by 12% of stressors. The systematic assessment of marine natural resources and stressors in the Tortugas region pointed to several gaps in the information. For example, of the nine marine resource components reviewed in this report, the living component of coral reefs and hardbottom resources had the best rated information with 25% of stressor categories rated "Good" for information richness. In contrast, the there was a paucity of information for seagrass and algal communities and sea birds resource components.

Comparative analysis of three brevetoxin-associated bottlenose dolphin (Tursiops truncatus) mortality events in the Florida Panhandle region (USA)

In the Florida Panhandle region, bottlenose dolphins (Tursiops truncatus) have been highly susceptible to large-scale unusual mortality events (UMEs) that may have been the result of exposure to blooms of the dinoflagellate Karenia brevis and its neurotoxin, brevetoxin (PbTx). Between 1999 and 2006, three bottlenose dolphin UMEs occurred in the Florida Panhandle region. The primary objective of this study was to determine if these mortality events were due to brevetoxicosis. Analysis of over 850 samples from 105 bottlenose dolphins and associated prey items were analyzed for algal toxins and have provided details on tissue distribution, pathways of trophic transfer, and spatial-temporal trends for each mortality event. In 1999/2000, 152 dolphins died following extensive K. brevis blooms and brevetoxin was detected in 52% of animals tested at concentrations up to 500 ng/g. In 2004, 105 bottlenose dolphins died in the absence of an identifiable K. brevis bloom; however, 100% of the tested animals were positive for brevetoxin at concentrations up to 29,126 ng/mL. Dolphin stomach contents frequently consisted of brevetoxin-contaminated menhaden. In addition, another potentially toxigenic algal species, Pseudo-nitzschia, was present and low levels of the neurotoxin domoic acid (DA) were detected in nearly all tested animals (89%). In 2005/2006, 90 bottlenose dolphins died that were initially coincident with high densities of K. brevis. Most (93%) of the tested animals were positive for brevetoxin at concentrations up to 2,724 ng/mL. No DA was detected in these animals despite the presence of an intense DA-producing Pseudo-nitzschia bloom. In contrast to the absence or very low levels of brevetoxins measured in live dolphins, and those stranding in the absence of a K. brevis bloom, these data, taken together with the absence of any other obvious pathology, provide strong evidence that brevetoxin was the causative agent involved in these bottlenose dolphin mortality events.

Fish and habitat community assessments on North Carolina shipwrecks: potential sites for detecting climate change in the graveyard of the Atlantic

The Monitor National Marine Sanctuary (MNMS) was the nation’s first sanctuary, originally established in 1975 to protect the famous civil war ironclad shipwreck, the USS Monitor. Since 2008, sanctuary sponsored archeological research has branched out to include historically significant U-boats and World War II shipwrecks within the larger Graveyard of the Atlantic off the coast of North Carolina. These shipwrecks are not only important for their cultural value, but also as habitat for a wide diversity of fishes, invertebrates and algal species. Additionally, due to their unique location within an important area for biological productivity, the sanctuary and other culturally valuable shipwrecks within the Graveyard of the Atlantic are potential sites for examining community change. For this reason, from June 8-30, 2010, biological and ecological investigations were conducted at four World War II shipwrecks (Keshena, City of Atlanta, Dixie Arrow, EM Clark), as part of the MNMS 2010 Battle of the Atlantic (BOTA) research project. At each shipwreck site, fish community surveys were conducted and benthic photo-quadrats were collected to characterize the mobile conspicuous fish, smaller prey fish, and sessile invertebrate and algal communities. In addition, temperature sensors were placed at all four shipwrecks previously mentioned, as well as an additional shipwreck, the Manuela. The data, which establishes a baseline condition to use in future assessments, suggest strong differences in both the fish and benthic communities among the surveyed shipwrecks based on the oceanographic zone (depth). In order to establish these shipwrecks as sites for detecting community change it is suggested that a subset of locations across the shelf be selected and repeatedly sampled over time. In order to reduce variability within sites for both the benthic and fish communities, a significant number of surveys should be conducted at each location. This sampling strategy will account for the natural differences in community structure that exist across the shelf due to the oceanographic regime, and allow robust statistical analyses of community differences over time.

New symbiotic hypothesis on the origin of eukaryotic flagella

The origin of eukaryotic flagella has long been a mystery. Here we review the possibility that flagella sprouted evolutionarily from the eukaryotic cell proper seems very unlikely because it is hard to imagine what function and benefit in natural selection the flagella would have provided to the cells when they first emerged as simple buds. Lynn Margulis' 1970 spirochete hypothesis, though popular still, has never been confirmed. Moreover, the absence of tubulin and axonemal dynein in the spirochetes and the incapability of the bacterial and eukaryotic membranes' making a continuum now suggest that the hypothesis is outdated. Tubulin genes were recently identified in a new bacteria division, verrucomicrobia, and microtubules have also been found in one of these species, epixenosomes, the defensive ectosymbionts. On the basis of these data, we propose a new symbiotic hypothesis: that the mid-ancestor of eukaryotic cells obtained epixenosomelike verrucomicrobia as defensive ectosymbionts and the ectosymbionts later became endosymbiotic. They still, however, protruded from the surface of their host to play their role. Later, many genes were lost or incorporated into the host genome. Finally, the genome, the bacterial membrane, and the endosymbiotic vesicle membrane were totally lost, and fingerlike protrusions with microtubules formed. As the cells grew larger, the defensive function of the protrusions eventually weakened and then vanished. Some of the protrusions took on a new role in cell movement, which led them to evolve into flagella. The key step in this process was that the dynein obtained from the host evolved into axonemal dyneins, attaching onto the microtubules and forming motile axonemes. Our hypothesis is unproven, but it offers a possible explanation that is consistent with current scientific thought. We hope that our ideas will stimulate additional studies on the origin of eukaryotic flagella and on investigations of verrucomicrobia. Whether such studies confirm, refine, or replace our hypothesis, they should nevertheless further our understanding of the origin of eukaryotic cells.

Resolving Ambiguity in Nonmonotonic Inheritance Hierarchies

This paper describes a theory of inheritance theories. We present an original theory of inheritance in nonmonotonic hierarchies. The structures on which this theory is based delineate a framework that subsumes most inheritance theories in the literature, providing a new foundation for inheritance. * Our path-based theory is sound and complete w.r.t. a direct model-theoretic semantics. * Both the credulous and the skeptical conclusions of this theory are polynomial-time computable. * We prove that true skeptical inheritance is not contained in the language of path-based inheritance. Because our techniques are modular w.r.t. the definition of specificity, they generalize to provide a unified framework for a broad class of inheritance theories. By describing multiple inheritance theories in the same "language" of credulous extensions, we make principled comparisons rather than the ad-hoc examination of specific examples makes up most of the comparative inheritance work.

Motivated Action Theory: A Formal Theory of Causal Reasoning

When we reason about change over time, causation provides an implicit preference: we prefer sequences of situations in which one situation leads causally to the next, rather than sequences in which one situation follows another at random and without causal connections. In this paper, we explore the problem of temporal reasoning --- reasoning about change over time --- and the crucial role that causation plays in our intuitions. We examine previous approaches to temporal reasoning, and their shortcomings, in light of this analysis. We propose a new system for causal reasoning, motivated action theory, which builds upon causation as a crucial preference creterion. Motivated action theory solves the traditional problems of both forward and backward reasoning, and additionally provides a basis for a new theory of explanation.

Surviving the Information Explosion: How People Find Their Electronic Information

We report on a study of how people look for information within email, files, and the Web. When locating a document or searching for a specific answer, people relied on their contextual knowledge of their information target to help them find it, often associating the target with a specific document. They appeared to prefer to use this contextual information as a guide in navigating locally in small steps to the desired document rather than directly jumping to their target. We found this behavior was especially true for people with unstructured information organization. We discuss the implications of our findings for the design of personal information management tools.