Genetics-Based Population Pharmacokinetics and Pharmacodynamics of Risperidone in a Psychiatric Cohort.

BACKGROUND: High interindividual variability in plasma concentrations of risperidone and its active metabolite, 9-hydroxyrisperidone, may lead to suboptimal drug concentration. OBJECTIVE: Using a population pharmacokinetic approach, we aimed to characterize the genetic and non-genetic sources of variability affecting risperidone and 9-hydroxyrisperidone pharmacokinetics, and relate them to common side effects. METHODS: Overall, 150 psychiatric patients (178 observations) treated with risperidone were genotyped for common polymorphisms in NR1/2, POR, PPARα, ABCB1, CYP2D6 and CYP3A genes. Plasma risperidone and 9-hydroxyrisperidone were measured, and clinical data and common clinical chemistry parameters were collected. Drug and metabolite concentrations were analyzed using non-linear mixed effect modeling (NONMEM(®)). Correlations between trough concentrations of the active moiety (risperidone plus 9-hydroxyrisperidone) and common side effects were assessed using logistic regression and linear mixed modeling. RESULTS: The cytochrome P450 (CYP) 2D6 phenotype explained 52 % of interindividual variability in risperidone pharmacokinetics. The area under the concentration-time curve (AUC) of the active moiety was found to be 28 % higher in CYP2D6 poor metabolizers compared with intermediate, extensive and ultrarapid metabolizers. No other genetic markers were found to significantly affect risperidone concentrations. 9-hydroxyrisperidone elimination was decreased by 26 % with doubling of age. A correlation between trough predicted concentration of the active moiety and neurologic symptoms was found (p = 0.03), suggesting that a concentration >40 ng/mL should be targeted only in cases of insufficient, or absence of, response. CONCLUSIONS: Genetic polymorphisms of CYP2D6 play an important role in risperidone, 9-hydroxyrisperidone and active moiety plasma concentration variability, which were associated with common side effects. These results highlight the importance of a personalized dosage adjustment during risperidone treatment.

Qualitative, quantitative and temporal study of cutting agents for cocaine and heroin over 9 years

Forensic laboratories mainly focus on the qualification and the quantitation of the illicit drug under analysis as both aspects are used for judiciary purposes. Therefore, information related to cutting agents (adulterants and diluents) detected in illicit drugs is limited in the forensic literature. This article discusses the type and frequency of adulterants and diluents detected in more than 6000 cocaine specimens and 3000 heroin specimens, confiscated in western Switzerland from 2006 to 2014. The results show a homogeneous and quite unchanging adulteration for heroin, while for cocaine it could be characterised as heterogeneous and relatively dynamic. Furthermore, the results indicate that dilution affects more cocaine than heroin. Therefore, the results provided by this study tend to reveal differences between the respective structures of production or distribution of cocaine and heroin. This research seeks to promote the systematic analysis of cutting agents by forensic laboratories. Collecting and processing data related to the presence of cutting agents in illicit drug specimens produces relevant information to understand and to compare the structure of illicit drug markets.

RNA enrichment method for quantitative transcriptional analysis of pathogens in vivo applied to the fungus Candida albicans.

UNLABELLED: In vivo transcriptional analyses of microbial pathogens are often hampered by low proportions of pathogen biomass in host organs, hindering the coverage of full pathogen transcriptome. We aimed to address the transcriptome profiles of Candida albicans, the most prevalent fungal pathogen in systemically infected immunocompromised patients, during systemic infection in different hosts. We developed a strategy for high-resolution quantitative analysis of the C. albicans transcriptome directly from early and late stages of systemic infection in two different host models, mouse and the insect Galleria mellonella. Our results show that transcriptome sequencing (RNA-seq) libraries were enriched for fungal transcripts up to 1,600-fold using biotinylated bait probes to capture C. albicans sequences. This enrichment biased the read counts of only ~3% of the genes, which can be identified and removed based on a priori criteria. This allowed an unprecedented resolution of C. albicans transcriptome in vivo, with detection of over 86% of its genes. The transcriptional response of the fungus was surprisingly similar during infection of the two hosts and at the two time points, although some host- and time point-specific genes could be identified. Genes that were highly induced during infection were involved, for instance, in stress response, adhesion, iron acquisition, and biofilm formation. Of the in vivo-regulated genes, 10% are still of unknown function, and their future study will be of great interest. The fungal RNA enrichment procedure used here will help a better characterization of the C. albicans response in infected hosts and may be applied to other microbial pathogens. IMPORTANCE: Understanding the mechanisms utilized by pathogens to infect and cause disease in their hosts is crucial for rational drug development. Transcriptomic studies may help investigations of these mechanisms by determining which genes are expressed specifically during infection. This task has been difficult so far, since the proportion of microbial biomass in infected tissues is often extremely low, thus limiting the depth of sequencing and comprehensive transcriptome analysis. Here, we adapted a technology to capture and enrich C. albicans RNA, which was next used for deep RNA sequencing directly from infected tissues from two different host organisms. The high-resolution transcriptome revealed a large number of genes that were so far unknown to participate in infection, which will likely constitute a focus of study in the future. More importantly, this method may be adapted to perform transcript profiling of any other microbes during host infection or colonization.

Combining niche modelling and landscape genetics to study local adaptation: A novel approach illustrated using alpine plants

Understanding the factors that shape adaptive genetic variation across species niches has become of paramount importance in evolutionary ecology, especially to understand how adaptation to changing climate affects the geographic range of species. The distribution of adaptive alleles in the ecological niche is determined by the emergence of novel mutations, their fitness consequences and gene flow that connects populations across species niches. Striking demographical differences and source sink dynamics of populations between the centre and the margin of the niche can play a major role in the emergence and spread of adaptive alleles. Although some theoretical predictions have long been proposed, the origin and distribution of adaptive alleles within species niches remain untested. In this paper, we propose and discuss a novel empirical approach that combines landscape genetics with species niche modelling, to test whether alleles that confer local adaptation are more likely to occur in either marginal or central populations of species niches. We illustrate this new approach by using a published data set of 21 alpine plant species genotyped with a total of 2483 amplified fragment length polymorphisms (AFLP), distributed over more than 1733 sampling sites across the Alps. Based on the assumption that alleles that were statistically associated with environmental variables were adaptive, we found that adaptive alleles in the margin of a species niche were also present in the niche centre, which suggests that adaptation originates in the niche centre. These findings corroborate models of species range evolution, in which the centre of the niche contributes to the emergence of novel adaptive alleles, which diffuse towards niche margins and facilitate niche and range expansion through subsequent local adaptation. Although these results need to be confirmed via fitness measurements in natural populations and functionally characterised genetic sequences, this study provides a first step towards understanding how adaptive genetic variation emerges and shapes species niches and geographic ranges along environmental gradients.

Nutritional behaviour and beliefs of ski-mountaineers: a semi-quantitative and qualitative study.

BACKGROUND: Endurance athletes are advised to optimize nutrition prior to races. Little is known about actual athletes' beliefs, knowledge and nutritional behaviour. We monitored nutritional behaviour of amateur ski-mountaineering athletes during 4 days prior to a major competition to compare it with official recommendations and with the athletes' beliefs. METHODS: Participants to the two routes of the 'Patrouille des Glaciers' were recruited (A, 26 km, ascent 1881 m, descent 2341 m, max altitude 3160 m; Z, 53 km, ascent 3994 m, descent 4090 m, max altitude 3650 m). Dietary intake diaries of 40 athletes (21 A, 19 Z) were analysed for energy, carbohydrate, fat, protein and liquid; ten were interviewed about their pre-race nutritional beliefs and behaviour. RESULTS: Despite belief that pre-race carbohydrate, energy and fluid intake should be increased, energy consumption was 2416 ± 696 (mean ± SD) kcal · day(-1), 83 ± 17 % of recommended intake, carbohydrate intake was only 46 ± 13 % of minimal recommended (10 g · kg(-1) · day(-1)) and fluid intake only 2.7 ± 1.0 l · day(-1). CONCLUSIONS: Our sample of endurance athletes did not comply with pre-race nutritional recommendations despite elementary knowledge and belief to be compliant. In these athletes a clear and reflective nutritional strategy was lacking. This suggests a potential for improving knowledge and compliance with recommendations. Alternatively, some recommendations may be unrealistic.

Pouvoir et genre en pentecôtisme : d'un « paradoxe » à l'autre. Analyse à partir d'une enquête quantitative suisse

A partir d'une étude quantitative de grande envergure des communautés religieuses menées en Suisse, ce chapitre analyse les positions d'autorité selon le genre en s'intéressant aux différents facteurs qui favorisent l'implication des femmes aux postes à responsabilité et en comparant les spécificités des communautés pentecôtistes aux autres communautés religieuses. Si les femmes constituent la majorité des fidèles pentecôtistes et 35% des salariés à temp partiel, seules 4% des communautés sont dirigés par une femme. Parmi les facteurs qui permettent aux femmes d'accéder à des postes à responsabilités, le nombre de salariés apparaît déterminant, car il permet d'inclure les femmes dans l'équipe pastorale sans bouleverser le leadership. En revanche, les variables théologiques n'ont pas d'incidence significative, la revendication d'une théologie conservatrice pouvant aller de pair avec la présence de femmes dans la hiérarchie ecclésiale. Au-delà du décalage supposé entre théorie et pratique, ce chapitre invite à s'interroger sur l'utilisation en sociologie des religions d'arguments théologiques qui ne sont pas forcément pertinent du point de vue sociologique.

La recherche. Méthodes : quantitative, qualitative, mixte.

La simulation sous ses différentes formes est devenue un outil incontournable dans la formation des professionnels de la santé. Il n'en demeure pas moins que la simulation intervient dans un environnement complexe où le comportement humain est une variable essentielle. Dans ce contexte, la recherche en simulation est indispensable : elle doit produire des connaissances qui nous permettent de mieux comprendre l'apprentissage par la simulation. Pour atteindre cet objectif, la recherche en simulation doit être aussi rigoureuse que toute recherche clinique, afin qu'elle puisse produire des connaissances de qualité. De par la complexité de l'environnement simulé, la recherche dans ce domaine est riche et recourt à des méthodes variées issues des sciences du comportement, de l'éducation et plus largement des sciences sociales.

Genome-wide enrichment analysis between endometriosis and obesity-related traits reveals novel susceptibility loci.

Endometriosis is a chronic inflammatory condition in women that results in pelvic pain and subfertility, and has been associated with decreased body mass index (BMI). Genetic variants contributing to the heritable component have started to emerge from genome-wide association studies (GWAS), although the majority remain unknown. Unexpectedly, we observed an intergenic locus on 7p15.2 that was genome-wide significantly associated with both endometriosis and fat distribution (waist-to-hip ratio adjusted for BMI; WHRadjBMI) in an independent meta-GWAS of European ancestry individuals. This led us to investigate the potential overlap in genetic variants underlying the aetiology of endometriosis, WHRadjBMI and BMI using GWAS data. Our analyses demonstrated significant enrichment of common variants between fat distribution and endometriosis (P = 3.7 × 10(-3)), which was stronger when we restricted the investigation to more severe (Stage B) cases (P = 4.5 × 10(-4)). However, no genetic enrichment was observed between endometriosis and BMI (P = 0.79). In addition to 7p15.2, we identify four more variants with statistically significant evidence of involvement in both endometriosis and WHRadjBMI (in/near KIFAP3, CAB39L, WNT4, GRB14); two of these, KIFAP3 and CAB39L, are novel associations for both traits. KIFAP3, WNT4 and 7p15.2 are associated with the WNT signalling pathway; formal pathway analysis confirmed a statistically significant (P = 6.41 × 10(-4)) overrepresentation of shared associations in developmental processes/WNT signalling between the two traits. Our results demonstrate an example of potential biological pleiotropy that was hitherto unknown, and represent an opportunity for functional follow-up of loci and further cross-phenotype comparisons to assess how fat distribution and endometriosis pathogenesis research fields can inform each other.

Étude descriptive quantitative et corrélationnelle portant sur la perception de la qualité de vie des proches aidants de plus de 65 ans qui prennent soin d'un proche souffrant d'une problématique de démence

La problématique : En Suisse, même si l'on constate une longue tradition du modèle de famille pluri-générationnelle multi-locale (Tourollier, 2009), l'évolution démographique a pour effet le vieillissement des aidants (Anchisi, 2010). La société véhicule l'idée que trop de personnes en perte d'autonomie sont abandonnées par leurs familles et que celles-ci relèguent toutes leurs responsabilités à l'Etat. Selon Pitaud (2009), cette vision est erronée, car son étude démontre que les membres de la famille forment généralement le noyau de ce réseau d'aide qui permet leur maintien à domicile. Il s'agit, pour l'auteur, d'une solution à la fois humaine et économiquement acceptable. Le contexte global du vieillissement et de la possibilité de fragilisation psychique suggère qu'une meilleure prise en compte des besoins de l'entourage des personnes souffrants de problématique de démence peut améliorer leur qualité ainsi que celle des proches aidants (Thomas, 2005). But : Cette étude quantitative vise à décrire la perception qu'ont les proches aidants de leur propre qualité de vie incluant leur vulnérabilité. Méthode: Cette étude quantitative descriptive corrélationnelle a été effectuée auprès de 30 proches aidants, recrutés selon un échantillonnage non probabiliste. Pour les corrélations exploratoires, des tests de Pearson, Student, Wilcoxon ou Mann Whitney ont été effectués. Le questionnaire proposé est tiré des études Pixel et il contient des données sociodémographiques, quatre dimensions portant sur la qualité de vie perçue ainsi que deux dimensions sur la vulnérabilité. Résultats: L'âge moyen des proches aidants participant est de 77,47 ans (ÉT 4,74). Les résultats montrent que 40% d'entre eux sont impliqués dans l'aide auprès du malade depuis plus de cinq ans. La plus grande partie a un niveau de formation de type maîtrise professionnelle (70%). Le score moyen de la perception de la qualité de vie (max. 105 points) est de 63.20 (ÉT 10.25). La vulnérabilité perçue est divisée en deux dimensions (max 50 points par partie). Pour la dimension 1 ; la moyenne pour l'impact de la maladie est de 29.00 (ÉT 5.63). Pour la dimension 2 ; la moyenne de l'aggravation de la vulnérabilité, est de 34.26 (ÉT 10.25). Des corrélations exploratoires montrent que l'âge, la durée des soins, le genre sont associées avec une diminution de la qualité de vie ou l'aggravation de la vulnérabilité perçue. Conclusion : Malgré les limites de la présente étude qui sont liées à la petitesse de l'échantillon, les résultats sont conciliables avec les écrits antérieurs. Il serait judicieux de poursuivre des recherches sur ce sujet afin d'approfondir et d'affiner les représentations utiles au renforcement du rôle infirmier auprès des proches aidants d'une part et des autres professionnels du réseau de soin d'autre part, ceci dans le but de favoriser la promotion de la santé auprès des proches aidants qui sont un maillon indispensable dans la chaîne des soins.

Integrating quantitative proteomics and metabolomics in a cellular model of diabetic retinopathy

Diabetic retinopathy is the leading cause of visual loss in individuals under the age of 55. Most investigations into the pathogenesis of diabetic retinopathy have been concentrated on the neural retina since this is where clinical lesions are manifested. Recently, however, various abnormalities in the structural and secretory functions of retinal pigment epithelium that are essential for neuroretina survival, have been found in diabetic retinopathy. In this context, here we study the effect of hyperglycemic and hypoxic conditions on the metabolism of a human retinal pigment epithelial cell line (ARPE-19) by integrating quantitative proteomics using tandem mass tagging (TMT), untargeted metabolomics using MS and NMR, and 13C-glucose isotopic labeling for metabolic tracking. We observed a remarkable metabolic diversification under our simulated in vitro hyperglycemic conditions of diabetes, characterized increased flux through polyol pathways and inhibition of the Krebs cycle and oxidative phosphorylation. Importantly, under low oxygen supply RPE cells seem to consume rapidly glycogen storages and stimulate anaerobic glycolysis. Our results therefore pave the way to future scenarios involving new therapeutic strategies addressed to modulating RPE metabolic impairment, with the aim of regulating structural and secretory alterations of RPE. Finally, this study shows the importance of tackling biomedical problems by integrating metabolomic and proteomics results.