Priming of a DNA metabarcoding approach for species identification and inventory in marine macrobenthic communities

Dissertação de mestrado em Molecular Genetics

BIOMedical search engine framework: lightweight and customized implementation of domain-specific biomedical search engines

The Smart Drug Search is publicly accessible at http://sing.ei.uvigo.es/sds/. The BIOMedical Search Engine Framework is freely available for non-commercial use at https://github.com/agjacome/biomsef

Fetal behavior and heart rate in twin pregnancy: a review

Fetal movements and fetal heart rate (FHR) are well-established markers of fetal well-being and maturation of the fetal central nervous system. The purpose of this paper is to review and discuss the available knowledge on fetal movements and heart rate patterns in twin pregnancies. There is some evidence for an association or similarity in fetal movement incidences or FHR patterns between both members of twin pairs. However, the temporal occurrence of these patterns seems to be for the most part asynchronous, especially when stricter criteria are used to define synchrony. The available data suggest that fetal behavior is largely independent of sex combination, fetal position, and presentation. Conversely, chorionicity appears to have some influence on fetal behavior, mainly before 30 weeks of gestation. There is preliminary evidence for the continuity of inter-individual differences in fetal activity and FHR patterns over pregnancy. Comparisons between studies are limited by large methodological differences and absence of uniform concepts and definitions. Future studies with high methodological quality are needed to provide a more comprehensive knowledge of normal fetal behavior in twin pregnancy.

Effect of pH on Candida tropicalis virulence factors

Dissertação de mestrado em Bioengenharia

Perceção e produção de sons consonânticos do português europeu por aprendentes chineses

Dissertação de mestrado em Português Língua Não Materna (PLNM): Português Língua Estrangeira (PLE) Português Língua Segunda (PL2)

Formulierung von Nutzerpräferenzen in Multimedia-Retrieval-Systemen

Multimedia, retrieval, multimedia-retrieval-system, multimedia query languages, weighting, preferences

Rationelle Angebotserarbeitung in der Gießerei unter Beachtung technologischer Ähnlichkeit

Technological, similarity, foundry

Ecologia da ictiofauna de um córrego de cabeceira da bacia do alto rio Paraná, Brasil

Ecological studies were conducted in the ichthyofauna of Cedro, a small headwater stream located in a degraded area of State of São Paulo, Brazil, situated in the upper Paraná River basin. These are the results of two non-consecutive years observations and collections in two biotopes of that stream: a pool and a rapid. The ecological characteristics studied change in space and time. The present richness of species is high (21 species), nine of which are constant, six accessory and six accidental. The diversity is low (0.69 to 2.38), and the numeric predominance, from one to three species, occurred in both biotopes. The most frequent species are Poecilia reticulata (Peters, 1859) (28.1%), Corydoras cf. aeneus (Gill, 1858) (20.3%) and Hypostomus cf. ancistroides (Ihering, 1911) (19.8%). The density ranges from 0.7 to 19.8 specimens/m³. The similarity index indicates high similarity between the ichthyofauna (45.0% to 95.0%) inside the same or contiguous biotopes. The evenness (0.46 to 1.0) is comparable to those found in similar studies carried out in other streams.

Abundância e flutuação populacional das espécies de Chrysomya (Diptera, Calliphoridae) em Pelotas, Rio Grande do Sul, Brasil

To estimate the populational fluctuation of Chrysomya Robineau-Desvoidy, 1830 species and the relation of populational abundance around, six wind oriented trap (WOT) were placed in three distinct ecological areas (urban, rural and wild) in Pelotas, Rio Grande do Sul, Brazil, from February/1993 to January/1995. The flies were weekly collected. Captured species were Chrysomya albiceps Wiedmann, 1819, C. megacephala Fabricius, 1794 and C. putoria Wiedmann, 1830 with respective abundance of 64.5%, 19.7% and 0.9%, representing a total of 85.0% of 409,920 specimens of Calliphoridae. The three species demonstrated similarity in the populational fluctuation, except in the abundance. The populational peak ocurred in autum when the temperature decreases. In the months of July to November no fly was collected, recomposing the population in December, when the temperature surpassed 20ºC.

Morphometric variability in populations of Palaemonetes spp. (Crustacea, Decapoda, Palaemonidae) from the Peruvian and Brazilian Amazon Basin

Morphometric variability among shrimp populations of the genus Palaemonetes Heller, 1869 from seven lakes (Huanayo and Urcococha, in Peru; Amanã, Mamirauá, Camaleão, Cristalino e Iruçanga, in Brasil) in the Amazon Basin, presumably belonging to Palaemonetes carteri Gordon, 1935 and Palaemonetes ivonicus Holthuis, 1950, were studied. The morphometric studies were carried out from the ratios obtained from the morphometric characters. Multivariated analysis (Principal Components Analysis-PCA, Discriminant Function Analysis and Cluster Analysis) were applied over the ratios. Intra- and interpopulation variations of the rostrum teeth, and the number of spines in the male appendix, were analyzed through descriptive statistics and bivariate analysis (Spearman Rank Correlation test). Results indicated a wide plasticity and overlapping in the studied ratios between populations. The Principal Components Analysis was not able to separate different populations, revealing a large intrapopulation plasticity and strong interpopulation similarity in the studied ratios. Although the Discriminant Functions Analysis was not able to fully discriminate populations, they could be allocated in three subgroups: 1) Cristalino and Iruçanga; 2) Huanayo, Urcococha and Camaleão and 3) Mamirauá and Amanã. The first two groups were morphometrically separated from each other, whereas the third one presented a strong overlap with the former two. The Cluster Analysis confirmed the first two subgroups separation, and indicated that the first and third groups were closely related. Rostrum teeth and number of spines in the appendix masculina showed a large intrapopulation variation and a strong overlapping among the studied populations, regardless of the species.

Diet of Teius oculatus (Sauria, Teiidae) in southern Brazil (Dom Feliciano, Rio Grande do Sul)

We analyzed stomach contents of 58 specimens of Teius oculatus (D'Orbigny & Bibron, 1837) (20 adult males, 17 adult females and 21 juveniles) captured in Dom Feliciano, RS, Brazil, to evaluate diet composition and sexual and ontogenetic variations in prey consumption. Diet was composed of 15 prey categories, all arthropods. Orthoptera was the most frequent prey type. Quantitatively, termites were the most important prey item (59.5%). There were no significant differences between the diets of adult males and females. Ontogenetic differences were found, mainly concerning volume of prey consumed. Adult lizards ingested significantly larger prey than juveniles (U = 170.00; p < 0.001). Juveniles, although having a comparatively less diverse diet (10 prey types) consumed a larger number of items (45.7% of total). Diet similarity was higher between juveniles and adult males (Ojk = 0.97) and prey diversity was higher in the diet of adult females (H' = 2.65). Based on importance value index the most important item in the diet of T. oculatus was Orthoptera. We conclude that T. oculatus in Dom Feliciano has a relatively generalized diet and it is an opportunist lizard, feeding on arthropods, mainly insects.

Diet of Astyanax paranae (Characidae) in streams with different riparian land covers in the Passa-Cinco River basin, southeastern Brazil

An analysis of the diet of Astyanax paranae Eigenmann, 1914 in nine streams located in the Passa-Cinco River basin (upper Paraná River system) was performed to investigate the feeding habits of this species, check for possible spatial variations in diet and to investigate the influence of riparian vegetation in the composition of the diet. Stomach contents of 243 specimens were analyzed by the methods of relative frequency of occurrence and volume, and the diet was characterized by the alimentary index (AIi). The species showed insectivorous feeding habits, with a predominance of terrestrial and aquatic insects in the diet, varying by location. In most streams, resources of allochthonous origin were the most consumed. The participation of aquatic insects and terrestrial plants were high in most streams, while terrestrial insects and invertebrates were highest in streams with a greater presence of riparian forest. The two streams located draining pasture fields were the only places were A. paranae consumed algae and macrophyte fragments. These results were corroborated by the analysis of similarity (ANOSIM): the descriptor "percentage of riparian forest" was the highest environmental influence on the diet of A. paranae. The study shows that riparian forest percentage on the stream reach determines the species diet composition, but A. paranae is also able to gather enough food resources in a variety of severely degraded environments.

Diversity of harvestmen (Arachnida, Opiliones) in Parque da Onça Parda, southeastern Brazil

The environment most diverse in harvestmen species is the Atlantic Forest of São Paulo. However, there remains a lack of studies regarding their communities in certain regions. Among these regions is one south of the Paranapiacaba mountain range in the state of São Paulo, the Parque da Onça Parda (POP). Through nocturnal collections and pitfall traps, the region's harvestmen community has been studied. The observed richness of this site included 27 species, with dominance of three species: Holcobunus nigripalpis Roewer, 1910, Neosadocus maximus (Giltay, 1928) and Munequita sp., accounting for 68.4% of harvestmen abundance. This makes the diversity of POP more similar to the semideciduous Atlantic Forest communities of the interior than to those of the Coastal Atlantic Forest that contains the park. Its geographic location places it within the Southern São Paulo State (SSP) area of endemism, along with the Parque Turístico do Alto Ribeira (PETAR), with which it shares up to 12% similarity regarding harvestmen fauna. Richness and abundance of harvestmen were positively related to temperature and humidity. The period of animal activity (as measured by abundance and richness) varied throughout the night, being highest in the early hours during both studied seasons (summer and winter).

Diet of Procyon cancrivorus (Carnivora, Procyonidae) in restinga and estuarine environments of southern Brazil

Despite its wide range and abundance on certain habitats, the crab-eating raccoon Procyon cancrivorus (G. Cuvier, 1798) is considered one of the less known Neotropical carnivore species. In the present study we analyzed the diet of P. cancrivorus in a peat forest and in an estuarine island in southernmost Brazil. Fruits of the gerivá palm tree Syagrus romanzoffiana were the most consumed item in the peat forest, followed by insects and mollusks. Small mammals, followed by Bromelia antiacantha (Bromeliaceae) fruits and brachyuran crustaceans were the most frequent items in the estuarine island. Other items found in lower frequencies were Solanum sp., Psidium sp., Smilax sp. and Dyospiros sp. fruits, diplopods, scorpions, fishes, anuran amphibians, reptiles (black tegu lizard and snakes), birds and medium-sized mammals (white-eared opossum, armadillo and coypu). Levin’s index values (peat forest: 0.38; estuarine island: 0.45) indicate an approximation to a median position between a specialist and a well distributed diet. Pianka’s index (0.80) showed a considerable diet similarity between the two systems. Procyon cancrivorus presented a varied diet in the studied areas and may play an important role as seed disperser on coastal environments in southernmost Brazil.

Diversity and population characteristics of terrestrial isopods (Crustacea, Oniscidea) across three forest environments in southern Brazil

Terrestrial isopods are important and dominant component of meso and macrodecomposer soil communities. The present study investigates the diversity and species composition of terrestrial isopods on three forests on the Serra Geral of the state of Rio Grande do Sul, Brazil. The area has two natural formations (Primary Woodland and Secondary Woodland) and one plantation of introduced Pinus. The pitfall traps operated from March 2001 to May 2002, with two summer periods and one winter. There were 14 sampling dates overall. Of the five species found: Alboscia silveirensis Araujo, 1999, Atlantoscia floridana (van Name, 1940), Benthana araucariana Araujo & Lopes, 2003 (Philoscidae), Balloniscus glaber Araujo & Zardo, 1995 (Balloniscidae) and Styloniscus otakensis (Chilton, 1901) (Styloniscidae); only A. floridana is abundant on all environments and B. glaber is nearly exclusive for the native forests. The obtained data made it possible to infer about population characteristics of this species. The Similarity Analysis showed a quantitative difference among the Secondary forest and Pinus plantation, but not a qualitative one. The operational sex ratio (OSR) analysis for A. floridana does not reveal significant differences in male and female proportions among environments. The reproductive period identified in the present study for A. floridana was from spring to autumn in the primary forest and Pinus plantation and during all year for the secondary forest. The OSR analysis for B. glaber reveals no significant differences in abundance between males and females for secondary forest, but the primary forest was a significant difference. The reproductive period for B. glaber extended from summer to autumn (for primary and secondary forest). This is the first record for Brazil of an established terrestrial isopod population in a Pinus sp. plantation area, evidenced by the presence of young, adults and ovigerous females, balanced sex ratio, expected fecundity and reproduction pattern, as compared to populations from native vegetation areas.