Genetic diversity of Chinese domestic goat based on the mitochondrial DNA sequence variation

The aim of this study was to characterize the genetic diversity of domestic goat in China. For this purpose, we determined the sequence of the mitochondrial DNA (mtDNA) control region in 72 individuals of the Yangtze River delta white goat, and reanalysed

Cloning,Expression and Sequence Analysis of A Luciferase Gene from the Chinese Firefly Pyrocoelia pygidialis

从一种来自中国日行性萤火虫(云南窗萤)发光器官mRNA中克隆、测序并表达了有功能的荧光素酶.云南窗萤荧光素酶的cDNA序列有1647个碱基,编码548个氨基酸残基.从推测得到的氨基酸序列的比对分析得出:云南窗萤的荧光素酶与来自Lampyris noctiluca,L.turkestanicus和Nyctophila cf.caucasica三种萤火虫的荧光素酶有97.8%的序列一致性.从推测得出的氨基酸序列进行系统发育分析,其结果表明:云南窗萤和Lampyris+Nyctophila聚在一起,与同属的发光强夜行性的萤火虫不形成的单系.云南窗萤荧光素酶在大肠杆菌中表达的条带大约70kDa,并且在有荧光素存在时发出黄绿色荧光.对荧光素酶的结构模拟和分析表明,云南窗萤荧光素酶基因的氨基端和羧基端结构域之间的裂沟处存在这5个多肽环,这正是从其他荧光素酶推测得到的催化荧光反应时的底物结合位点.云南窗萤和窗萤属的其他3种萤火虫的荧光素酶卡目比,有13个不同氨基酸位点,位于模拟分子结构的表面.对于这些多肽环、不刚氨基酸残基和晶体结构的进一步研究有利于解释日行和夜行性萤火虫荧光素酶的差异.

Identification and distribution of cartilaginous fishes of the Persian Gulf (Bushehr Province waters)

Class Condrichthyes consist of two sub-classes: Holocehali and. Elasmobranchii, the second one are more divers and has more importance. Selachimorpha (sharkes) and Batidoidimorpha (rays and skates) are two super-order of Elasmobranchii, which they have crucial role in ecological balance in marine ecosystmes. Except few cases, most of sharks and rays (rays and skates) are not well identified, so a lot of works need to be done in this regards. The area of study is located between 49°, 35' and 52°, 33' E and between 27°, 21' and 30°, 02' N in depth of 7 to 78 in. Study were conducted diuring August 1998, September 1999. Samples were taken during 3 sea cruises from 70 bottom trawl net. All sharks and batoid fishes were identified based on biometric specifications (weight, total, length and sexuality for both group and extra biometric specifications, disc width, disc length, and tail length only for, batoid fishes). The 1140 specimens of batoid fishes identified belonged to 6 families, and 18 species. 3 new species were identified, they are Himantura sp.1 and Himantura sp.2 belonged to Dasyatidae family and Rhinobatos sp. belonged to Rhinobatidae Familiy. It needs more works and more adaquate ducuments for cl.earfing scientific names of these species. The 275 specimens of sharks identified belonged to 6 families and 10 species. Chiloscyllium sp. belonged to Hemiscylliidae, family as a new species was identified.

A study of Rastrineobola argentea (Pellegrin), (Pisces : Cyprinidae) and its importance in the fisheries of Lake Kyoga and the northern waters of Lake Victoria

Rastrineobola argentea is the only native fish species which is still abundant in Lakes Victoria and Kyoga, the others being two introduced species; Lates niloticus and Oreochromis niloticus. It forms an important commercial fishery in Lake Victoria and is very important as food of Lates niloticus in both lakes. The depletion of the originally abundant insectivorous and zooplanktivorous hap lochromines due to predation by Lates niloticus appears to have favoured it by reducing potential competitors for food. It now consumes a wide range of invertebrate organisms that originally used to be eaten by different specialised species of haplochromines which include: larvae and pupae of chironomids and chaoborids, copepods and ostracods. Its size in Lake Kyoga (where the Nile perch was introduced earlier) has, however, decreased and is smaller than that in Lake Victoria probably due to high predation pressure. The twin effect of predation and fishing are likely to exert heavy pressure on the species. Research is therefore required to provide information for its management.

The present-day fishery of the Uganda waters of Lake Victoria

The Uganda waters of Lake Victoria comprise an area of 28,500 square kilometres with a shore line of 2,380 kilometres extending from the Uganda/Tanzania border in the west to the Uganda/Kenya border in the east. A large part of the Uganda waters of the lake is less than 60 metres deep, waters deeper than 60 metres being on the eastern side of the lake. Thus the Uganda part of the lake is tilted towards the east. A number of rivers drain into the lake from the north and the River Nile flows out of the lake towards the Mediterranean Sea. The Ssese, Kome, Buvuma and Busoga Islands form a very distinctive feature of the lake. These are perhaps the remaining high hills which survived the drowning of the northern valleys during the formation of the lake. In fact, in T. P. O'Brien's book 'The Prehistoric Uganda Protectorate (1939)', Solmon gives a critical summary of the work on the formation of Lake Victoria and shows that the northern part of the lake has numerous drowned valleys, a feature which provides varying habitats for particular species of fish and which may have an effect on the species composition reflected in the catches in different areas along the northern shore of the lake. It is interesting to note that although Lake Victoria as a whole has a number of rivers draining into it, Halbfass (1923) calculated and found that 76 per cent of the water entering the lake is precipitation on the lake surface.

A report of the gillnet survey in the Ugandan waters of Lake Victoria under IFMP (January to March 2006)

Under the Implementation of the Fisheries Management Plan (IFMP) for Lake Victoria Result area 4, quarterly gillnet surveys are undertaken to monitor changes in fish stocks and environmental parameters in the shallow nontrawlable areas of the lake For purposes of monitoring surveys, the Ugandan sector of Lake Victoria is divided into 3 zones as shown in Figure 1. During the second quarter of APE2, two gillnet surveys were undertaken in zones 1 and 3 in February and March 2006 respectively. The purpose of the surveys was to monitor changes in the fish stocks and their biological characteristics, water quality, algal dynamics and invertebrate communities; as detailed in the various sections of the report. The surveys followed those conducted in November and December 2006 in the same zones. Results of the surveys showed that the number of fish taxa was higher in the near-shore fleets (0-100m) decreasing towards offshore. The near-shore areas were also associated with high primary productivity and hence secondary production to which Caridina and other invertebrates are part. These organisms are an important source of food for the fish and this may partly account for the high number of fish species recorded in this area of the lake. It was also observed that although Nile perch was the most dominant fish species recorded in all the stations during the surveys, haplochromines, Brycinus sadleri, Brycinus jacksonii Oreochromis niloticus and various mormyrid species contributed significantly to the fish biomass. The presence of many fish species and their coexistence with the predator, Nile perch is attributed to the presence of macrophyte cover and rocky habitats which serve as refugia in the shallow inshore habitats of Lake Victoria. In addition, the vegetated habitats are an important source of food for the fishes. As reported in macro-invertebrate studies, big populations of Caridina and other invertebrates were recorded among macrophyte beds. Caridina is an important source of food for juvenile Nile perch and other fish species so are the other invertebrates especially chironomid larvae, odonata nymphs and molluscs. Resurgence in haplochromine cichlids was observed during the surveys. The presence of haplochromines cichlids in all the sites especially Thruston Bay where it ranked the second by percentage contribution in number, is evidence of the recovery of this group of fishes which had declined largely due to predation by L. niloticus. Caridina nilotica has also increased in biomass and is a major component of the Nile perch diet. This could have reduced predation pressure on the haplochromines by Nile perch and has possibly contributed to recent resurgence in haplochromines cichlids in the lake in the shallow nontrawlable areas of the lake Rastrineobola argentea was found to be an important prey item for Nile perch and other fish species such as Clarias gariepinus. Measures should therefore be taken to ensure sustainable harvesting of Dagaa so that there is enough left to sustain the fishery of Nile perch and other species.

A report of the fisheries catch assessment survey in the Ugandan waters of Lake Victoria for the March 2007 survey

This report presents findings of the CAS conducted in the Ugandan waters of Lake Victoria in March 2007. The results of the previous seven CASs conducted under the same programme in July/August/September/November 2005, and March/August/December 2006 are included to show the emerging trends.

Report of the baseline survey undertaken on the Chinese cage site in Napoleon Gulf, Northern Lake Victoria, 12 March 2012

The government of the People's Republic of China through a 2007 agreement with the Government of the Republic of Uganda, has establishment of an Agricultural Technology Demonstration Center (ATDC). The first phase covering the building of aquaculture infrastructure at Kajjansi ARDC is complete and the second operation phase has started in which facilities for cage culture have been set up in the Napoleon gulf, northern Lake Victoria near Jinja. The cage facility is aimed at boosting fish farming within the lake as a diversification to the traditional pond fish culture technology. NaFIRRI scientists as well as Chinese experts undertook a baseline survey in the chosen cage site on 12 March 2012. The survey covered determination of water depth, water transparency, measurement of selected physical-chemical parameters (temperature,dissolved oxygen, conductivity and pH; determination of the nutrient status and study of algae, invertebrate and fish communities at the site. Materials and methodologies used in the survey were based on the Standard Operating Procedures (SOPs) of NaFIRRI. The study area was divided into three study sites. Site 1 (upstream) was at 8.9 metre depth while site 2 (proposed cage site) and site 3 (downstream) were 6 and 4.3 metres deep respectively. Water transparency was lowest at site 1 (1.58 m) and highest at site 3 (1.64 m). Dissolved oxygen at the three sites ranged from 6.0 to 8 mg/I. Water temperature profiles fluctuated within narrow limits between 26.5 and 27.5 DC. Measurements of pH were between 7 (neutral) and 8 (alkaline) while electrical conductivity was between 98 and 101 uS/em. These observed physical-chemical parameters at the study site were considered suitable for cage fish rearing purposes. Nitrite-nitrogen levels varied within narrow limits from 0.043 to 0.0453 mgtl. Similarly, Ammonia-nitrogen varied between 0.015 and 0.0185 mg/1. Soluble reactive phosphorus (SRP) level was highest at site 3 (O.012mgll) compared to that at sites 1 and 2 (0.009mgll). Total suspended solids (TSS) were higher at site 1 (83.3mgll), thereafter decreasing to lower levels at sites 2 (24.8mgtl) and 3 (19.8mgl) respectively. The nutrient level results observed here all fall below the maximum permissible limits by NEMA and therefore the site is recommended for cage culture The algal community was constituted by four major groups: Blue greens,Greens, Cryptophytes, and Diatoms with blue greens as the common and dominant group. High algal biomass (19944961 ugtL) of the dominant blue green algae was observed at site 1 compared site 2 and 3 (58655.2 & 27487. 7 ugtL) respectively. Occurrence of toxicin producing algae: microsytis and cylindrospermopsis in the proposed cage area was considered to be of not much significance as their concentrations were below harmful levels. However, monitoring their presence, biomass and seasonality will be critical in order to follow when and where they occur and at what time of the year for ease of management of the cages

A report of the fisheries catch assessment survey in the Ugandan waters of Lake Victoria for the March 2006 survey

This report presents findings of the CAS conducted in the Ugandan waters of Lake Victoria in March 2006. The results of the CASs in July, August, September, and November 2005 are also included to show the emerging trends. The findings indicate stable production of Nile perch and tilapia but large fluctuations in the Mukene fishery. The estimates from the March 2006 data show a monthly catch of 12,360.2 t worth shs12.8 billion of direct gross income to the fishers. Out of this, 36% (4479.4 t) of the catch was Nile perch which was worth shs 9.3 billion (73%) of the direct gross revenue of the fishers. The catches of tilapia contributed 19% of the total catch and 18% of the gross revenue from the catches at the beach. The catches of Mukene, a low value fish, contributed 44% of the weight of the total catches but yielded only 8% of the estimated gross income of fishers.

A report of the fisheries catch assessment survey (CAS) in the Ugandan waters of Lake Victoria for July 2005

This report presents findings of the first CAS in the Ugandan waters following the agreed SOPs, carried out in July 2005. The findings indicate a total fish catch of 15,047.5 t for July 2005, contributed by Mukene/Dagaa (39.5%), Nile perch (33.1%), Tilapias (17.1%), Haplochromines (9.2%) and other fish species 1.2%. This information gives a new perspective of the estimates of fish production in the Ugandan waters of the lake which are based on field observations. Continuation of support to the CAS programme will certainly get rid of the uncertainties about the fish production levels of the lake which have been there for a long time. This information is vital for fisheries development and fisheries management endeavours.

Final report of the fisheries catch assessment survey in the Ugandan waters of Lake Victoria for the March 2010 survey

This report presents findings of the CAS conducted in the Ugandan waters of Lake Victoria in March 2010. The results of the previous ten CASs conducted under the same programme in July, August, September and November 2005; in March, August and December 2006; in March, and August 2007; in February and December 2008 are included to show the emerging trends. The report also presents total annual catch estimates for the Ugandan part of the lake from 2005 to 2010.

An instance of cyclonic upwelling in the southern offshore waters of Lake Victoria

Evidence is presented that cyclonic upwelling took place in the southern offshore waters of Lake Victoria on the 22nd to the 23rd March, 1969. Before this, the main upper thermocline was tilted downwards in the leeward northern half of the lake in response to the accumulation of epilimnetic water. Cyclonic upwelling might be quite common because of the frequent occurrence of storms on Lake Victoria, and probably on other tropical African lakes. However, to my knowledge, it has never been reported from any lake.

Evaluations of the pelagic resources in the Burundi waters of Lake Tanganyika and the evolution of the fisheries

The important pelagic fishery resources of northern Lake Tanganyika were identified after a preliminary scientific evaluation, and in Burundi, with governmental assistance they were rapidly developed and exploited more intensively until overfishing was thought to have occurred. At this point, legal measures were introduced in order to protect the resource by restricting fishing effort and maintaining the total yield near the apparent maximum sustained limit. Complementary biological research on the fish stocks did not accompany the rapid fishery development and now an intensive stock assessment programme has been launched by the Government and UNDP in order to define more precisely the available fish stocks and to consider, with the co-operation of the neighbouring lacustrine states, suitable ways of ensuring optimum levels of fish harvest from year to year.

Composition of waters of lakes and rivers in east and west Africa

Thirty-three groups of geochemically related natural lake and river waters collected from 368 sites scattered over East and West Africa, were investigated to determine correlations between their various ions and the patterns of change in their ionic composition across the African continent. The following nine significant correlations were found to exist in the entire area or in a major part of it: sodium and potassium; sodium and chloride; sodium and sulphate; potassium and ammonium; potassium and chloride; ammonium and nitrate; calcium and magnesium; magnesium and chloride; sulphate and chloride. When compared with the world average composition. The concentration of potassium in these waters was found to be high, that of calcium and nitrate was low. With respect to the area of East Africa only, trends in the pattern of change involving the ionic composition of the lake and river water and the longitude at which the sites were present, were found to exist for the ratio of sodium: conductivity (which showed an increase in the direction of West to East), magnesium: conductivity, and for the sum of calcium and magnesium: phosphate was generally found to increase in East Africa in the direction of west to East.