Purification and characterization of DNA-dependent RNA polymerase II from Candida utilis

DNA-dependent RNA polymerase II from Candida utilis has been purified to near homogeneity. The purified enzyme resolved into three subforms, viz. IIO, IIA and IIB. On SDS-PAGE the enzyme showed ten polypeptides with molecular weights in the range of 205 kDa to 14 kDa. By two dimensional electrophoresis (IEF followed by SDS-PAGE) the presence of basic and acidic polypeptides has been demonstrated. The enzyme showed Km values of 5, 5.6 and 8 mu M for GTP, CTP and ATP, respectively, and the activity was inhibited by low levels of oc-amanitin and antibodies raised against bovine RNA polymerase II. By Western blot analysis the enzyme was found to cross-react with antibodies to bovine RNA polymerase II. RNA polymerase II from G. utilis is a phosphoprotein, the subunits RPB1 and RPB10 were found to be phosphorylated. Analysis of carboxy-terminal domain indicated that it was functionally redundant at least in case of nonspecific transcription, implicating its role in other nuclear processes, such as promoter specific initiation or transcription activation or RNA processing.

In vitro and in vivo regulation of assimilatory nitrite reductase from Candida utilis

The nitrate assimilation pathway in Candida utilis, as in other assimilatory organisms, is mediated by two enzymes: nitrate reductase and nitrite reductase. Purified nitrite reductase has been shown to be a heterodimer consisting of 58- and 66-kDa subunits. In the present study, nitrite reductase was found to be capable of utilising both NADH and NADPH as electron donors. FAD, which is an essential coenzyme, stabilised the enzyme during the purification process. The enzyme was modified by cysteine modifiers, and the inactivation could be reversed by thiol reagents. One cysteine was demonstrated to be essential for the enzymatic activity. In vitro, the enzyme was inactivated by ammonium salts, the end product of the path way, proving that the enzyme is assimilatory in function. In vivo, the enzyme was induced by nitrate and repressed by ammonium ions. During induction and repression, the levels of nitrite reductase mRNA, protein, and enzyme activity were modulated together, which indicated that the primary level of regulation of this enzyme was at the transcriptional level. When the enzyme was incubated with ammonium salts in vitro or when the enzyme was assayed in cells grown with the same salts as the source of nitrogen, the residual enzymatic activities were similar. Thus, a study of the in vitro inactivation can give a clue to understanding the mechanism of in vivo regulation of nitrite reductase in Candida utilis.

Biogenic nanosilver incorporated reverse osmosis membrane for antibacterial and antifungal activities against selected pathogenic strains: An enhanced eco-friendly water disinfection approach

Reverse osmosis (RO) membranes have been used extensively in water desalination plants, waste water treatment in industries, agricultural farms and drinking water production applications. The objective of this work is to impart antibacterial and antifungal activities to commercially available RO membrane used in water purification systems by incorporating biogenic silver nanoparticles (AgNPs) synthesized using Rosa indica wichuriana hybrid leaf extract. The morphology and surface topography of uncoated and AgNPs-coated RO membrane were studied using Scanning Electron Microscopy (SEM) and Atomic Force Microscopy (AFM). Elemental composition of the AgNPs-coated RO membrane was analyzed by energy-dispersive X-ray spectroscopy (EDAX). The functional groups were identified by Fourier Transform Infrared spectroscopy (FT-IR). Hydrophilicity of the uncoated and AgNPs-coated RO membrane was analyzed using water contact angle measurements. The thermal properties were studied by thermogravimetric analysis (TGA). The AgNPs incorporated RO membrane exhibited good antibacterial and antifungal activities against pathogenic bacterial strains such as E. coli, S. aureus, M. luteus, K. pneumoniae, and P. aeruginosa and fungal strains such as Candida tropicalis, C. krusei, C. glabrata, and C. albicans.

Calidad bromatológica del ensilaje de hoja de plátano (Musàcea: variedad FHIA-01) con dos niveles de inclusión de levadura de torula (Candida utilis) más melaza

El presente estudio se realizó con el objetivo de determinar la calidad bromatológica (materia seca MS, proteína bruta PB, fibra neutro detergente FND), ácidos grasos volátiles AGV (ácido láctico, ácido acético, acido butírico) y pH del ensilaje de hoja de plátano (Musácea; variedad, FHIA-01), con dos niveles de inclusión de levadura de Torula (Candida utilis). El muestreo se realizó en la granja porcina y en los laboratorios de bromatología y microbiología de la Facultad de Ciencia Animal de la UNA. Los micro silos fueron conservados por 30 días. Los tratamientos evaluados fueron dos niveles de inclusión de levadura de Torula (Candida utilis al 0.5 y 1%). Los tratamientos se distribuyeron en un diseño completamente al azar (DCA) con tres repeticiones. El tratamiento uno (T1) consistió en hoja de plátano; el tratamiento dos (T2) en hoja de platano+melaza+0.5%levadura de Torula y el tratamiento tres (T3) en hoja de platano+melaza+1% levadura de Torula. Los resultados de la calidad bromatológica para MS por tratamiento fueron para T3:17.68%, T2: 17.22% y para T1: 16.46%. La PB alcanzó valores de: 14.08%, 13.50%, 13.12% para T3, T1 y T2, respectivamente. La FND presentó valores por tratamiento de T1: 67.80%, T3: 61.32% y T2: 56.39. Para los AGV, los resultados fueron para ácido láctico: T2 con 1.25%, T3 con 1.19% y T1 con 0.74%; para ácido acético T1 con 2.46%, T2 con 1.44% y T3 con 1.40; para ácido butírico no hubo presencia en ninguno de los tratamientos. Los resultados para el pH fueron para T1: 6.75%, para T3: 4.17% y para T2: 4.07. Con base en estos resultados, el T3 presentó mejor resultado en la calidad bromatológica y pH, superando al resto de los tratamientos, aunque obtuvo mejor resultado el T2 para el caso del ácido láctico. El uso de levaduras y melaza en el ensilaje mejora su calidad bromatológica.

Preparation and characterization of an intramolecular electron transfer in a pentaammineruthenium derivative of Candida krisei cytochrome c

A semisynthetic binuclear metalloprotein has been prepared by appending the pentaammineruthenium moiety to histidine 39 of the cytochrome c from the yeast Candida krusei. The site of ruthenium binding was identified by peptide mapping. Spectroscopic and electrochemical properties of the derivative indicate the protein conformation is unperturbed by the modification. A preliminary (minimum) rate constant of 170s^(-1) has been determined for the intramolecular electron transfer from ruthenium(II) to iron(III), which occurs over a distance of at least 13Å (barring major conformational changes). Electrochemical studies indicate that this reaction should proceed with a driving force of ~170mV. The rate constant is an order of magnitude faster than that observed in horse heart cytochrome c for intramolecular electron transfer from pentaammineruthenium(II)(histidine 33) to iron(III) (over a similar distance, and with a similar driving force), suggesting a medium or orientation effect makes the Candida intramolecular electron transfer more favorable.

Propiedades catalíticas de la lipasa B de Candida antarctica inmovilizada en soportes magnéticos. Actividad hidrolítica en medios acuosos

Los enzimas son piezas fundamentales en el correcto funcionamiento de cualquier sistema biológico. Gracias a su naturaleza proteica y a las estructuras tridimensionales complejas que son capaces de adoptar, estas moléculas actúan como catalizadores de reacciones químicas. L a función de los enz imas es disminuir la energía de activación de la reacción, aumentando de este modo la velocidad de reacción. L o s enzimas no alteran el balance e nergético de las reacciones en que intervienen, ni modifican, por lo tanto, el equilibrio de la reacción . Por este motivo, en las reacciones catalizadas por enzimas se observa una mayor rapidez a la hora de alcanzar el equilibrio. La ciencia que estudia l a velocidad de las reacciones químicas que son catalizadas por enzimas es la cinética enzimática , e n la cual , las moléculas sobre las que actúan los enzimas se denominan sustratos y las moléculas resultantes de la conversión productos. El estudio de la cin ética de un enzima permite explicar los detalles de su mecanismo catalítico, su papel en el metabolismo o incluso cómo se controla su actividad en la célula. Las dos propiedades más importantes a la hora de trabajar con enzimas son: el tiempo que tarda en saturarse con un sustrato en particular y la velocidad máxima de reacción que puede alcanzar. Para el estudio de estas propiedades en el laboratorio se realizan los ensayos enzimáticos. El procedimiento a seguir en estos casos es medir la aparición de un producto o la desaparición de un sustrato frente al tiempo.

Propiedades catalíticas de la lipasa B de Candida antarctica inmovilizada en soportes magnéticos. Actividad sintética en disolventes orgánicos

Este trabajo se centra en la inmovilización de la lipasa B de Candida antarctica en nanopartículas magnéticas y la posterior caracterización cinética de su actividad sintética en medios orgánicos para la pr oducción de biodiesel. La historia del biodiesel comienza en 1893, cuando Rudolph Diesel, el padre del motor diésel, puso en marcha el primer motor de este tipo. Más tarde, en 1900, Diesel ganó el Grand Prix en la Feria Mundial de París con su m otor impulsado por un biodiesel de aceite de cacahuete. En 1903, además, comenzó la producción del Modelo T de Henry Ford, diseñado para utilizar etanol como combustible. Diesel creía que la utilización de biodiesel era el futuro de la automoción: “ el uso de aceites vegetales como combustibles para motor puede parecer insignificante hoy en día, pero estos aceites puede n convertirse, con el transcurso del tiempo, en combustibles tan importantes como el petróleo y el carbón lo son hoy en día ” Sin embargo, a p artir de 1920, los fueles basados en petróleo comenzaron a ganar terreno, debido a su mayor eficiencia, menor precio y mejor disponibilidad. De esta forma, el mercado de los biofueles quedó relegado hasta que las distintas crisis del petróleo (1973, 1979, 19 90) unidas a la creciente preocupación por la polución y la c onservación del medio ambiente, además de al aumento de la población y por tanto de la demanda de combustibles , llevaron a devolve r la mirada a estos fueles . Fue en esta época cuando comenzó, p rincipalmente en EEUU y Brasil, la producción a gran escala de biocombustibles de primera generación, basados en la utilización de excedentes agrícolas como el maíz y la caña de azúcar para la producción de bioetanol y aceites de maíz y grasas animales par a la producción de biodiesel .

Magnetic Cross-Linked Enzyme Aggregates (mCLEAs) of Candida antarctica Lipase: An Efficient and Stable Biocatalyst for Biodiesel Synthesis

Enzyme-catalyzed production of biodiesel is the object of extensive research due to the global shortage of fossil fuels and increased environmental concerns. Herein we report the preparation and main characteristics of a novel biocatalyst consisting of Cross-Linked Enzyme Aggregates (CLEAs) of Candida antarctica lipase B (CALB) which are covalently bound to magnetic nanoparticles, and tackle its use for the synthesis of biodiesel from non-edible vegetable and waste frying oils. For this purpose, insolubilized CALB was covalently cross-linked to magnetic nanoparticles of magnetite which the surface was functionalized with –NH2 groups. The resulting biocatalyst combines the relevant catalytic properties of CLEAs (as great stability and feasibility for their reutilization) and the magnetic character, and thus the final product (mCLEAs) are superparamagnetic particles of a robust catalyst which is more stable than the free enzyme, easily recoverable from the reaction medium and reusable for new catalytic cycles. We have studied the main properties of this biocatalyst and we have assessed its utility to catalyze transesterification reactions to obtain biodiesel from non-edible vegetable oils including unrefined soybean, jatropha and cameline, as well as waste frying oil. Using 1% mCLEAs (w/w of oil) conversions near 80% were routinely obtained at 30°C after 24 h of reaction, this value rising to 92% after 72 h. Moreover, the magnetic biocatalyst can be easily recovered from the reaction mixture and reused for at least ten consecutive cycles of 24 h without apparent loss of activity. The obtained results suggest that mCLEAs prepared from CALB can become a powerful biocatalyst for application at industrial scale with better performance than those currently available.

Conversion of Soybean oil to Biodiesel Fuel with Immobilized Candida Lipase on Textile Cloth

The characteristic of biodiesel fuel production from transesterification of soybean oil is studied. The reactant solution is the mixture of soybean oil, methanol, and solvent. A new lipase immobilization method, textile cloth immobilization, was developed in this study. Immobilized Candida lipase sp. 99-125 was applied as the enzyme catalyst. The effect of flow rate of reaction liquid, solvents, reaction time, and water content on the biodiesel yield is investigated. Products analysis shows that the main components in biodiesel are methyl sterate, methyl hexadecanoate, methyl oleate, methyl linoleate, and methyl linolenate. The test results indicate that the maximum yield of biodiesel of 92% was obtained at the conditions of hexane being the solvent, water content being 20 wt%, and reaction time being 24 h.

Intracellular accumulation of polyphosphate by the yeast Candida humicola G-1 in response to acid pH

Cells of a newly isolated environmental strain of Candida humicola accumulated 10-fold more polyphosphate (polyP), during active growth, when grown in complete glucose-mineral salts medium at pH 5.5 than when grown at pH 7.5. Neither phosphate starvation, nutrient limitation, nor anaerobiosis was required to induce polyP formation. An increase in intracellular polyP was accompanied by a 4.5-fold increase in phosphate uptake from the medium and sixfold-higher levels of cellular polyphosphate kinase activity. This novel accumulation of polyP by C. humicola G-1 in response to acid pH provides further evidence as to the importance of polyP in the physiological adaptation of microbial cells during growth and development and in their response to environmental stresses.