First report of the pantropical species Diploschistes rampoddensis from Europe

The lichen species Diploschistes rampoddensis, previously known only from a few localities in tropical and subtropical Asia and Oceania, is reported here for the first time in Europe. A detailed description, including macro- and microscopic characters, and comparisons with closely related taxa are also provided. Molecular analyses based on the nrITS were used to confirm this new record for the European lichen biota.

Aspectos químicos, biológicos e etnofarmacológicos do gênero Cassia

Species of Cassia are widely distributed in tropical and subtropical regions throughout the world, and have been extensively investigated chemically and pharmacologically.They are known to be a rich source of phenolic derivatives, most of them with important biological and pharmacological properties. Some Asian, African and Indian tribes use these species as a laxative, purgative, antimicrobial, antipyretic, antiviral and anti-inflammatory agent. Among a number of other classes of secondary metabolites, such as anthracene derivatives, antraquinones, steroids and stilbenoids, biologically active piperidine alkaloids are an especially important bioactive class of compounds that showed to be restricted to a small group of Cassia species. In this paper we present an overview of the chemical, biological and ethnopharmacological data on Cassia piblished in the literature.

Traditional and transgenic strategies for controlling tomato-infecting begomoviruses

Viruses of to the family Geminiviridae are considered some of the most important pathogens in tropical and subtropical regions of the world. Members of one Geminiviridae genus, Begomovirus, have been causing severe losses, particularly in tomato (Lycopersicon esculentum) production in the Americas and the Caribbean. Several new begomoviruses have been reported in the region and, at least one, Tomato yellow leaf curl virus (TYLCV), has been brought in from the Old World via infected transplants. In addition, the recombination events that are playing an important role in Begomovirus diversity have increased the complexity of their control. This scenario has led to the search for control measures that go beyond traditional host genetic resistance, chemical controls and cultural practices. In this review, besides the recommended classical control measures, transgenic approaches will be discussed, as well as the mechanisms involved in their successful control of viruses.

Caracterização de estirpes de Ralstonia solanacearum isoladas de plantas de batata com murcha bacteriana, por PCR-Rep e RAPD

Considerado como um dos mais sérios patógenos da batata (Solanum tuberosum), em regiões de clima tropical, subtropical, assim como em zonas mais quentes de clima temperado, Ralstonia solanacearum é uma espécie com significativa diversidade genética. Ela é caracterizada em um sistema binário de raças e biovares, com base nas espécies hospedeiras e na capacidade de utilizar diferentes fontes de carbono. A tentativa de utilizar a resistência genética como forma de controle de R. solanacearum não tem demonstrado estabilidade, devido a alterações climáticas nas diferentes regiões e a variabilidade das estirpes do patógeno. Devido às características epidemiológicas diferentes para essas biovares, estirpes da biovar 2 são mais factíveis de serem erradicadas em um sistema de controle integrado. Em um levantamento realizado em quatro regiões produtoras de batata do Rio Grande do Sul, foram obtidos isolados de R. solanacearum de 25 lavouras de dez municípios. Após a análise bioquímica dos isolados verificou-se a presença das biovares 1 e 2, com predominância da última. Os isolados obtidos foram submetidos à avaliação da variabilidade genética por PCR, utilizando seqüências repetitivas ERIC e BOX e oligonucleotídeos aleatórios (RAPD). A PCR-ERIC e BOX puderam diferenciar claramente as biovares 1 e 2. Porém, ambas não detectaram variabilidade entre isolados da biovar 2 e apenas PCR-BOX detectou variabilidade entre isolados da biovar 1. Já através de RAPD demonstrou-se claramente a separação das biovares verificando-se que os mesmos apresentam um perfil característico dependente da região da qual os isolados foram obtidos.

Genetic diversity of begomoviruses infecting soybean, bean and associated weeds in Northwestern Argentina

The subtropical Northwestern region of Argentina (provinces of Tucumán, Salta, Jujuy, Santiago del Estero and Catamarca) suffers from a high incidence of the whitefly Bemisia tabaci, and the detection of begomoviruses is also common. The Northwest is the main bean-growing region of the country, and approximately 10% of Argentina's soybean crop is grown in this area. We have used a PCR-based assay to establish the identity and genetic diversity of begomoviruses associated with bean and soybean crops in Northwestern Argentina. Universal begomovirus primers were used to direct the amplification of a fragment encompassing the 5' portion of the capsid protein gene. Amplified fragments were cloned, sequenced and subjected to phylogenetic analysis to determine the sequence identity to known begomoviruses. The data indicated the presence of four distinct begomoviruses, all related to other New World begomoviruses. The prevalent virus, which was present in 94% of bean and soybean samples and also in two weed species, is closely related to Sida mottle virus (SiMoV). A virus with high sequence identity with Bean golden mosaic virus (BGMV) was found in beans. The two remaining viruses displayed less than 89% identity with other known begomoviruses, indicating that they may constitute novel species. One of these putative novel viruses was detected in bean, soybean and tomato samples.

TAMANHO E FORMA DA UNIDADE AMOSTRAL PARA QUANTIFICAÇÃO DA SERAPILHEIRA EM FRAGMENTO DE FLORESTA ESTACIONAL SUBTROPICAL1

RESUMOPara o estudo do ciclo de nutrientes em uma floresta, é necessária a estimação precisa da quantidade de serapilheira depositada e de suas frações. Entre as formas reconhecidas para minimizar a variabilidade entre amostras está o uso do tamanho ótimo de unidades amostrais para a coleta da serapilheira. Entretanto, existem poucas recomendações nesse sentido, o que gera variação no tamanho da unidade amostral utilizada em experimentos similares. Assim, o objetivo deste trabalho foi determinar o tamanho e a forma ótimos da unidade amostral para quantificação de serapilheira em Floresta Estacional Subtropical. Para isso, foram alocadas, aleatoriamente, na área cinco parcelas de dimensões 3,0 x 2,0 m em cada uma das quatro estações do ano, subdivididas em 96 unidades básicas de 0,25 x 0,25 m. Em cada unidade básica foi coletada toda a matéria orgânica acima do solo, sendo esta separada nas frações folhas, galhos finos, resíduo. A estimativa do tamanho ótimo da unidade básica foi obtida por dois métodos distintos. Observou-se que o coeficiente de variação diminui à medida que aumenta o tamanho da unidade amostral; há diferenças na variabilidade da produção de serapilheira entre as parcelas na mesma estação de coleta; unidades amostrais retangulares são mais homogêneas entre si que as quadradas; recomenda-se a utilização de unidades amostrais de 0,40 m2 (1,5 m x 0,25 m) para a coleta de serapilheira em fragmento de Floresta Estacional Subtropical.

Impact of elevated temperature scenarios on potato leaf development

The objective of this study was to simulate the impact of elevated temperature scenarios on leaf development of potato in Santa Maria, RS, Brazil. Leaf appearance was estimated using a multiplicative model that has a non-linear temperature response function which calculates the daily leaf appearance rate (LAR, leaves day-1) and the accumulated number of leaves (LN) from crop emergence to the appearance of the upper last leaf. Leaf appearance was estimated during 100 years in the following scenarios: current climate, +1 °C, +2 °C, +3 °C, +4 °C e +5 °C. The LAR model was estimated with coefficients of the Asterix cultivar in five emergence dates and in two growing seasons (Fall and Spring). Variable of interest was the duration (days) of the crop emergence to the appearance of the final leaf number (EM-FLN) phase. Statistical analysis was performed assuming a three-factorial experiment, with main effects being climate scenarios, growing seasons, and emergence dates in a completely randomized design using years (one hundred) as replications. The results showed that warmer scenarios lead to an increase, in the fall, and a decrease, in the spring growing season, in the duration of the leaf appearance phase, indicating high vulnerability and complexity of the response of potato crop grown in a Subtropical environment to climate change.

Soil water evaporation under densities of coverage with vegetable residue

This study was conducted at the Agronomic Institute of Paraná (IAPAR) in Londrina, State of Paraná (PR), Brazil (latitude 23º18'S, longitude 51º09'W and average altitude of 585 m). The local climate, according to the classification of Köeppen, is Cfa type, i.e., humid subtropical climate, with rain in all seasons and can occur dry seasons during the winter. It was determined soil evaporation (E) under different coverage densities with residue from the wheat crop. The treatments were installed in weighting lysimeters of 2.66 m² and 1.3 m deep, which allows to determine E by the mass difference with measuring precision of 0.1mm at one hour intervals. Treatments consisted of 0; 2.5; 5 and 10 t ha-1 of wheat crop residues, placed evenly over each lysimeter. In the first cycle (September 22nd to October 20th, 2008), the reduction of E, as compared to a bare soil, was 4; 15 and 24%, while in the second cycle (December 1st to 30th, 2008), the reduction was of 15; 22 and 25%, respectively, for the treatments of 2.5; 5 and 10 t ha-1.

People and the intertidal : human induced changes, biodiversity loss, livelihood implications and management in the Western Indian Ocean

Vad händer i tidvattenzonen? Var går gränsen mellan land och hav, vad händer i tidvattenzonen och vem ansvarar för detta? I västra Indiska oceanen (VIO) kan avståndet mellan den lägsta nivån för lågvattnet och den högsta nivån för högvattnet vara flera kilometer och nivåskillnaderna upp till 6 meter och detta skapar ett stort och föränderligt område. Syftet med min avhandling är att öka förståelsen för tidvattenzonen i tropiska och subtropiska västra Indiska oceanen. Sammanfattningsvis visar mina studier att det finns ett mycket stort värde i den komplexa tidvattenzonen, men också att det här området hotas från både land och hav, genom t.ex. överexploatering, erosion och föroreningar. Uttnyttjandet av tidvattenzonen är stort och min avhandling har visat att aktiviteter såsom fiske i form av plocking av musslor och andra ryggradslösa djur och hamnaktiviteter påverkar den biologiska mångfalden negativt, vilket leder till försämrad levnadsstandard för resursutnyttjande människor i regionen. För att förbättra situationen krävs det mer forskning, miljöövervakning och bättre förvaltning av tidvattenzonen. Experter i regionen har rangordnat förslag på förvaltningsstrategier som skulle kunna testas för att förbättra miljön och skapa ett mer hållbart nyttjande. Avhandlingen visar även att det är möjligt att använda fjärranalysteknik såsom satellitbildsanalys för att kvantifiera mängden sjögräsvegetation (i form av biomassa), vilket kan ha stor betydelse för att förbättra storskalig miljöövervakning av kustnära naturtyper (habitat). I avhandlingsarbetet har jag använt mig av ett multidisciplinärt tillvägagångssätt och använt metoder såsom ekologisk och biologisk provtagning, intervjuer, observationer, diskussionsgrupper, frågeformulär och fjärranalys. Resultaten presenterade i denna avhandling ger en ökad kunskap om tidvattenzonen i utvecklingsländerna inom VIO-regionen som kan användas för att initiera och fortsätta att utveckla hållbara förvaltningsstrategier av biologiska resurser.

Inefficacy of albendazole sulphoxide and ivermectin for the treatment of bovine parasitic otitis caused by rhabditiform nematodes

The purpose of this study was to evaluate the efficacy of orally administered albendazole sulphoxide and pour-on ivermectin for the treatment of bovine parasitic otitis caused by rhabditiform nematodes. Eighteen Gyr cows presenting clinical otitis were divided in three groups with six animals each. The first one did not receive any treatment (control group). The second one was treated with 0.5% pour-on ivermectin, 500µg/kg of body weight, and the third group was treated with oral 6% albendazole sulphoxide, at 6.0mg/kg. Both ear canals of each animal were reexamined on days 7 and 21 post treatment. The animals in the control group remained infected throughout the days of observation. Ivermectin treatment did not show effectiveness on days 7 or 21 post treatment. The albendazole sulphoxide treatment had an efficacy of 16.7 and 25% on days 7 and 21, respectively. Further studies are required to assess an effective treatment for this parasitic disease, especially via alternative administration routes, because of its significant impact on Bos taurus indicus cattle breeding in Tropical and Subtropical Regions.

Solids removal in pyrolysis

Pyrolysis is a process for turning biomass into liquid fuel. The process consists of heating the biomass in inert conditions and quenching the resulting vapors into oil. The oil has many potential uses, such as heating fuel in peak heating plants. In order to broaden the application base and improve the quality of the oil, solids removal has to be addressed. The solids may also increase the probability of plugging in downstream equipment. The purpose of this research was to gain an understanding of the formation of solids in the pyrolysis process and to assess options for reducing the solid content of the oil. From literature it is known that the solids can be removed either by hot vapor filtration, liquid treatment or multiple cyclones. Hot vapor filtration decreases yield, but improves the stability of the oil while simultaneously removing solids and ash. Liquid treatment techniques are good for removing large particles but involve losses of pyrolysis liquid. Cyclones are a traditional robust technique used regularly in pyrolysis. In the experimental part of this thesis, a 2 MWfuel pyrolysis setup with 2 cyclones in series was operated and monitored. Solid and liquid samples were collected from various parts of the process for further examination. Sampling and sample treatment techniques were developed. The chemical properties of the pyrolysis char were also analyzed and assessed as a function of reactor temperature and fluidizing velocity. By measuring the particle size distributions it was noticed that there were much smaller particles collected from the second cyclone than fed into pyrolysis. The solids in the pyrolysis oil were even smaller. This was most likely caused by attrition and shrinkage. Due to better separation efficiency of the cyclones in large particles, excess attrition should be avoided.

Padrões de distribuição geográfica dos táxons brasileiros de Eragrostis (Poaceae, Chloridoideae)

O gênero Eragrostis está representado por 53 táxons no Brasil, 38 dos quais nativos e que podem ser reunidos nos seguintes padrões de distribuição geográfica: tropical, tropical/subtropical (táxons mais abundantes na área tropical mas que se estendem até a região sul), tropical e subtropical (tão abundantes na região tropical quanto na subtropical), subtropical, e subtropical/tropical (o oposto do segundo padrão). Uma análise destes padrões é apresentada juntamente com mapas representativos dos mesmos.

Ecological distribution of Cyanophyceae in lotic ecosystems of São Paulo State

A hundred seventy two stream reaches from six distinct natural regions (parts of biomes or geological areas) in São Paulo State (Atlantic Rainforest, Cerrado, Hard Water regions, Northwest region, Subtropical Rainforest, and Tropical Rainforest) were searched for the most representative macroscopic Cyanophyceae of phytobenthic communities. Selected ecological parameters were analyzed in each stream segment: conductance, current velocity, oxygen saturation, pH, turbidity, and water temperature. Algal abundance was evaluated as percentage cover. Thirthy four cyanophyte taxa were identified and Phormidium retzii was the most widespread species throughout the State, occurring in all studied regions, except in hard water areas, and was negatively correlated to conductance. The subtropical Rainforest region presented the highest mean species richness per site, whereas the tropical Rainforest region had the highest abundance (percentage cover) of blue-green algae. Correlation tests revealed that conductance was significantly and negatively related to variations in abundance and richness of cyanophyte in streams of São Paulo State. This relationship probably reflects the ability of blue-green algae to grow at medium to low ion content and to take advantage under nutrient stress conditions.

Epífitos vasculares em fragmentos de Floresta Ombrófila Mista, Curitiba, Paraná, Brasil

Este estudo foi realizado em 14 áreas de floresta com Araucária, sob clima Cfb, com valores médios anuais de precipitação de 1.450 mm e de temperatura 16,7 ºC. Foram registradas 106 espécies epifíticas (10 exóticas) distribuídas em 21 famílias. Orchidaceae (35 espécies), Polypodiaceae (14 spp.) e Bromeliaceae (12 spp.) apresentaram maior riqueza específica. O número de espécies nativas por fragmento variou entre 10 e 64. A riqueza dos epífitos vasculares em Floresta Ombrófila Mista é menor que em Floresta Ombrófila Densa, e maior que em florestas estacionais brasileiras. As variações climáticas, o tipo de cobertura vegetacional, o grau e intensidade de perturbação nos fragmentos são determinantes na manutenção e incremento das comunidades epifíticas.

Composição florística e estrutura comunitária de epífitos vasculares em uma floresta de galeria na Depressão Central do Rio Grande do Sul

Apesar das florestas de galeria serem amplamente difundidas nos neotrópicos, existem poucas informações disponíveis sobre seu epifitismo vascular. O objetivo deste estudo foi investigar a composição florística e a estrutura comunitária dos epífitos vasculares em uma floresta de galeria que acompanha dois arroios na Depressão Central do Rio Grande do Sul, sul do Brasil. A área estudada situa-se na Estação Experimental Agronômica (30°04' - 30°07' S e 51°40' - 51°42' W) da Universidade Federal do Rio Grande do Sul (UFRGS) a uma altitude aproximada de 40 m. O clima regional é subtropical úmido (Cfa), com médias anuais de temperatura e precipitação de 19,2 ºC e 1.310 mm, respectivamente. Sessenta forófitos com DAP mínimo de 10 cm foram amostrados através do método de pontos quadrantes. Os parâmetros de freqüência e diversidade foram estimados com base na ocorrência epifítica sobre indivíduos forofíticos e sobre os segmentos fuste e copa. O levantamento florístico resultou em 13 famílias, 32 gêneros e 50 espécies. As famílias mais ricas em espécies foram Orchidaceae (13), Bromeliaceae (8), Polypodiaceae (8), Cactaceae (5) e Piperaceae (5). Duas pteridófitas, Microgramma vacciniifolia e Polypodium pleopeltifolium, apresentaram os maiores valores de importância. O índice de diversidade de Shannon foi 3,434 (nats) para toda a comunidade epifítica. Considerando os ambientes de fuste e copa, os valores foram 3,092 e 3,298, respectivamente. Estes valores intermediários em relação a outros estudos no sul do Brasil provavelmente refletem uma típica situação subtropical, onde a diversidade epifítica decresce com a diminuição da temperatura e precipitação.