Identification of mesopelagic fish (with emphasis on major family) in Iranian water of the Oman Sea

This project was done for identifying the mesopelagic fish of the Iranian waters of Oman Sea, during two year from 2008 to 2010. The specimens were collected using two trawler vessel from nine station. All the specimens were fixed in formalin then in 70% alcohol and carried to the laboratory. In total of 19 species belonged to 14 families of 6 orders identified including: Echinorhinidae, Stomidae, Phosichthyidae, Synodontidae, Paralepididae, Myctophidae, Acropomatidae, Priacanthidae, Pentacerotidae, Champsodontidae, Gempylidae, Trichiuridae, Nomeidae and Congridae. Of which 17 species were identified up to species level including: Echinorhinus brucus, Bathophilus indicus, Chauliodus sloani, Harpadon nehereus, Lestrolepis japonica, Benthosema pterotum, Diaphus garmani, Diaphus effulgens, Bolinichthys photothorax, Acropoma japonicum, Synagrops adeni, Cookeolus boops, Histiopterus typus, Champsodon sagittus, Neoepinnula orientalis, Trichiurus lepturus, Cubiceps baxteri. Vinciguerria was identified up to genus level because only one specimen caught during the survey and one species (Congridae) was identified up to family level because only 3 specimens of this fish in early stage of life were caught and their characters were not suitable for identify up to species level. The highest species belong to Myctophidae family of Myctophiformes order.

Evaluation of some biological indices and population dynamic of "Saurida tumbil" in the northern Persian Gulf and Oman Sea

The Great lizardfish is one of the commercial demersal fishes in the Persian Gulf and Oman Sea. In this study the food preference index (FPI), Fullness index (FI) and stomach contents of Saurida tumbil were evaluated to assess the quantity and kind of food which this species consumes in the study area. The samples were collected monthly from commercial bottom trawl fisheries in main fishing grounds of eastern Strait of Hormuz. A total of 346 specimens were collected during years 2009-2010 of which 269 specimens were female and 77 specimens were male. The minimum and maximum total length were 161 and 590 mm, respectively with the highest frequency in length group of 350-370mm. Results showed that 20.9% of stomachs were full, 18.9% were semi-full and 60.2% were empty. The main stomach contents (FPI=80.2%) were fishes and minor stomach contents (FPI=25.7%) were crustacean (Specially crab and shrimp) and cephalopods were found as random food. The minimum and maximum FIs were 2.5 and 42.5 in December and September respectively; and the overall CV was 60.2. The results indicate that this fish is a relatively frugal species which consumes fishes as main food and there is no difference in feeding of male and female.

Population genetic structure of Rutilus frisii kutum in Caspian Sea using biometry and microsatellite molecular technique

In order to carry out Biometric studies, 75 samples were caught from 3 locations ( Tajan river, Sefidrud and Shirud) using Salic and the length (±1 mm) and weights (± 5 gr) of samples were determined. Using One-way ANOVA by SPPSS software, there wasn’t significant difference between locations in length and fecondity (P ≥0.01(, but there was significant difference between Shirud and tajan samples with sefidrud in weight ) P≤0.01(. In order to carry out genetic variation studies, 210 fish were caught from 3 different regions of the Iranian coastline (Khoshkrud, Tonekabon, Gorganrud) and 1 region in Azerbaijan (Waters of the Caspian Sea close to Kura River mouth) during 2008-2009 . Genomic DNA was extracted of fin using the phenol-chloroform. The quantity and quality of DNA from samples were assessed by spectrophptometer and 1% agarose gel electro-phoresis. PCR was carried out using 15 paired microsatellite primers. PCR products were separated on 8% polyacrylamide gels that were stained using silver nitrate. Molecular weight calculate using UVTech software. The recorded microsatellite genotypes were used as input data for the GENALEX software version 6 package in order to calculate allele and genotype frequencies, observed (Ho) and (He) expected heterozygosities and to test for deviations from Hardy-Weinberg equilibrium. Genetic distance between two populations was estimated from Nei standard genetic distance and genetic similarity index (Nei, 1972). Genetic differentiation between populations was also evaluated by the calculation of pairwise estimates of Fst and Rst values. From 15 SSR markers were used in this investigation, 9 of them were polymorph. Average of expected and observed heterozygosity was 0.54 and 0.49 respectively. Significant deviations from Hardy-Weinberg expectations were observed in all of location except Anzali lagoon- autumn in AF277576 and EF144125, Khoshkrud in EF144125 and Gorganrud and Kura in AF277576. Using Fst and Rst there was significant difference between locations ) P≤0.01(. According to Fst , the highest population differentiation (Fst= 0.217) was between Gorganrud and Khoshkrud that have the lowest Nm and the lowest (Fst= 0.086) was between Gorganrud and Tonekabon that have the highest Nm. Using Rst the highest population differentiation (Rst= 0.271) was between Tonekabon and spring Anzali lagoon and the lowest (Rst= 0.026) was between Tonekabon and Autumn Anzali 159 lagoon. Also the difference between Spring Anzali lagoon and Autumn Anzali lagoon was noticeable (Fst=0.15). AMOVA analysis with consideration of 2 sampling regions (Iran and Azerbaijan) and 7 sampling locations (Iran: Khoshkrud, Tonekabon, Gorganrud, Spring Anzali lagoon and Autumn Anzali lagoon ; Azerbaijan: the Kura mouth) revealed that almost all of the variance in data namely 83% )P≤0.01( was within locations, Genetic variances among locations was 14% )P≤0.01( and among regions was 3% )P≤0.01(. The genetic distance was the highest (0.646) between Gorganrud and Autumn Anzali lagoon populations, whereas the lowest distance (0.237) was between Gorganrud and Tonekabon River. Result obtained from the present study show that at least 2 different population of Rutilus frissi kutum are found in the Caspian sea,which are including the kura river population and the southern Caspian sea samples and it appears that there is more than one population in southern Caspian sea that should be attantioned in artifical reproduction Center and stoke rebilding.

Population dynamics and stock assessment of the common carp (Cyprinus carpio) in Iranian waters of the Caspian Sea

In order to come up with the responsible fishing pattern of common carp, there was a need to identify some of the biological characteristics and stock assessment of carp in Iranian waters of the Caspian Sea .The fork length ,weight ,age ,growth parameters of von bertalanffy and mortality rates of common carp were estimated from oct 2006 to sept 2007.Based on the exponential relationship between length and weight in the size range 6.3-65.6 cm ,b was calculated 2.895, 2.843 and 2.925 respectively for combined sexes ,males and females. The mean condition factor was 1.9 which is close to the ideal condition.The results from measuring 3170 specimens ,were showed the first fork length of maturity was 30 cm for males and 32 cm for females. The results indicated that females were predominate and sex ratio was 0.66:1 (M:F) and chi-squares analysis showeda significant difference between males and females.(p<0.05).Length infinity and growth coefficient were calculated by three different methods as below: Length frequency analysis : k=0.17 L∞ =68.04 Age-Length Key k=0.15 L∞ =74.25 Back calculation : k=0.14 L∞ =68.4 The mortality parameters and exploitation rate were estimated as below : Z=0.73 per year M=0.31 per year F=0.42 per year E=0.56 Refer to amount of common carp catch in 2007 -08 ,biomass was calculated 9640.2 tones by jone's cohort analysis and MSY 2374.5 tones.According to analysis ,the number of common carp in the distribution area (Iranian part of the Caspian Sea ) was estimated 24 millions in the 2006-07.

Kilka population dynamics in the south of the Caspian Sea

Populations of kilka in the Caspian Sea have important role in the food chain. This study was conducted to determine population parameters of three species of kilka in the south of the Caspian Sea, during 2006-2007. Mean length was 102.4±9.7 mm for common kilka, 117.8±6.9 mm for anchovy and 119.5±10.9 mm for bigeye. The relationship between length and weight indicated the negative allometric growth in the all three species. Mean age for common kilka, anchovy and bigeye were 3.6, 4.6 and 4.6 years, respectively. Sex ratio (M:F) were 0.52:1 for anchovy, 0.60:1 for common kilka and 1.60:1 for bigeye. The value of growth coefficient (K) was the highest (0.321) for the common kilka, (0.267) for the bigeye, and the lowest for the anchovy kilka (0.245). Total mortality estimated from the descending of the catch curve using the age structure, Z=1.280 yr-1 for common kilka, Z=1.067 yr-1 for anchovy, and Z=1.015 yr-1 for bigeye. Natural mortality (M) were estimated using Pauly formula as M=0.622, M=0.537 and M=0.503 per year for common kilka, bigeye and anchovy, respectively. Value of fishing mortality (F) were estimated from Z and M, as F=0.658 for common kilka, F=0.564 for anchovy and F=0.478 for bigeye. The exploitation rate (E) were estimated E=0.514 for common kilka, E=0.528 for anchovy and E= 0.471 for bigeye. The estimate of MCY (Maximum Constant Yield) was calculated using the more reliable time series of commercial catch data from 2001-2007, which resulted in an estimate of MCY for the kilka fishery of 14100 tonnes.

The seasonal variations of sea level due to density variations in the Arabian Gulf and Gulf of Oman

From the distribution of oceanographic data (temperature and salinity) in both Arabian Gulf and Gulf of Oman, the steric components (thermal, haline and steric heights) are calculated for the upper 50m layer during different seasons. The analysis reveals relevant evidence, that temperature variations (thermal component) play a role in the fluctuations of sea level within the investigated area. The salinity variations (haline component) is only significant near the entrance. The sea level variations due to density (steric component) is low during winter and spring and high during summer and autumn. The steric height is always lower in the northern and central regions of Arabian Gulf and higher in eastern region of Arabian Gulf and in the Gulf of Oman, i.e. the surface water must flow from the Gulf of Oman to the Arabian Gulf. The steric sea level gradient around the Strait of Hormuz are 0.04 cm/km in winter, 0.04 cm/km in spring, and 0.025 cm/km in summer and 0.014 cm/km in autumn.

Distribution and abundance of cirripede larvae (Cirripedia: Thoracica) in the northern Arabian Sea

Cirripede larvae obtained in the zooplankton samples of the North Arabian Sea Ecological and Environmental Research (NASEER) cruise I (January, 1992) have been studied for their distribution and abundance. They were collected in the northern Arabian Sea waters (22°51'N to 24°58'N, 60°05'E to 65°59'E). Thirty- two samples were taken at 18 stations. The maximum number of larvae were collected from a station near Indus cone (Sta. 8), whereas an off shore station (Sta. 37) and one near the Makran coast (Sta. 60) had poor representation. Regular coastal collections from Manora Channel (24°48'N, 66°59'E), during the study period of one year (1994), have been also included to supplement the NASEER samples. Only one naupliar stage (VI) and a cyprid stage were identified. Relative abundance in day and night samples were also studied.

A review of spider majid crabs of the northern Arabian Sea, with particular reference to Pakistani species, and with description of an undescribed Pleistacantha

The present report deals with the history of work done on northern Arabian Sea majids, their zoogeographical consideration and recognition of present status of certain genera which are established by recent workers. I have nothing of substance to add to previous treatment by Griffin & Tranter (1986). Emphasis is given to species inhabiting coastal waters of Pakistan. The occurrence of the genus Pleistacantha in the Arabian Sea and its adjacent gulfs is discussed in detail due to presence of a unique female which was taken by Fridtj of Nansen Cruise in 1977. This seems to be an undescribed species. At the moment the female is just given as Pleistacantha sp1 till more specimens obtained determine its position. Some interesting features of Doclea muricata are also considered.

Mangrove ecosystem of Red Sea coast (Saudi Arabia)

The present paper reviews critically the existing information on mangrove ecosystem of Saudi Arabian Red Sea coast and identifies problems and shortcomings that should be removed or remedied. Mangrove structure and composition seems to have been substantially studied along with salient environmental features, and these are thoroughly summarized herewith. However, the functional aspects, especially energy flow through the ecosystem, remain totally neglected. Both the flora and fauna indicate severe environmental conditions, such as very low nutrient levels, very high salinity values and hard bottom, which are unique to the area. Mangrove growth and diversity is very poor, although conditions in the southern part are relatively favourable. The extreme poverty of the ecosystem is supported by exports of organic matter from adjacent seaweed and seagrass ecosystems and also Sabakhas. Preponderance of epiphytic and benthic algae within the mangrove ecosystem is another source of nutrient replenishment in the otherwise oligotrophic habitat of Red Sea. Finally, a hypothetical model of energy flow in the ecosystem is proposed.

Spreading of Persian Gulf water in the northwestern Arabian sea during the month of January

The presence of different water masses in the North Arabian Sea continues to remain of interest to scientists and researchers. Focus on these water masses is due to the unique monsoonal reversal features of the Arabian Sea. The encroachment of Persian Gulf water into the Arabian Sea has been acknowledged and traced. This paper presents the results of an investigation on the spreading patterns of Persian Gulf water in the northwestern Arabian Sea. The study incorporated two different techniques: the core-layer method and the constant sigma-theta surface method on data collected during the North Arabian Sea Environment and Ecosystem Research (NASEER) programme. Horizontal curves of temperature and salinity plotted by both methods show that the Persian Gulf water reduces in concentration as it moves from west to east, whereas the major direction of flow is along the coast of Oman. The results of the study indicate that features of the Persian Gulf water in the northwestern Arabian Sea are so pronounced that either of the method can be used to study and identify the water mass fairly well.

Investigation of polymorphism by PCR-RFLP method in Cobia fish Rachycentron canadum in the Persian Gulf and Oman Sea

Cobia is a native fish species in Iranian waters in the Persian Gulf and Sea of Oman and has a good internal and foreign market. This fish is a fast growing species and for this reason Iranian Fisheries is considering to go for it culture practices. To go for any utilization such as fishing from wild stocks or culture activities, needs a better understanding of its peculiarities and genetic characteristics of its natural resources. Therefore, this project was discribed and conducted. In this investigation, cuts 2 or 3 cm of fin tissue of  specimen of Cobia obtained from Sistan and Bluchestan, Hormozgan, Bushehr and Khuzestan water provinces, were collected. DNA was extracted by Phenol-chlorophorm method and produced PCR product in length of 1060 and 1450 base pair of two mitochondrial genes COI and NADH2. Using 13 cutting enzymes (4 enzymes were subscriber for both of genes), 205 base pair (from 2510 base pair, equal with %3.8 from gene regains) were directly investigated. But binding patterns of enzymatic digestion of PCR products of both COI and ND genes from electrophoresis were monomorph in all samples and no polymorphism was observed. This may be attributed to the unsuitable choice of COI and ND2 genes for showing of intra specific divergence. But in general non-existence of genetic diversity or noticeable decrease of that among individuals has been reported in regions were fish migration exist and they can freely move between two regions. Therefore, non-observation of polymorphism in the study area might be the case and indicates represents the area. On the other hand, some scientists believe that the distributions of populations in different regions are greatly affected by environmental and physical and ecological factors. Althoug Cobia is a migratory fish, but with regard to the fact that the environmental conditions are different (specially temperature and salinity) between east and west of Persian Gulf and Oman sea, there is a possibility that different genetic groups of this species exist in the regions. Of course It is clear that using more samples and enzymes from other genetically regions could produce better results. Since none of the two investigated genes didn’t show genetic divergence or polymorphism amongst the individuals of one region or between different regions, therefore, statistic analysis for estimating of haplotype diversity or nucleotide diversity and drawing of relationship tree among individuals using available softwares was not possible.

Effect of thawing methods on the chemical, biochemical, microbiological and sensory indices of Caspian Sea kutum (Rutilus frisii kutum) and rainbow trout (Oncorhynchus mykiss)

Effects of different thawing method i.e. in a refrigerator, in water, at air ambient temperature and in a microwave oven on proximate, chemical (PV, TBA, FFA, TVB-N, SSP, FA), biochemical (pH, WHC,ThL), microbial (total viable, psychrotrophic, coliform, Shewanella and yeast-mould count) and sensory analysis were carried out on frozen whole Caspian sea Kutum (Rutilus frisii kutum) and Rainbow trout (Oncorhynchus mykiss) carcasses. The values of ash, protein, SSP, WHC, PUFA, PUFA/SFA. EPA+DHA/C16:0, pH, and microbial count of thawed samples decreased significantly while fat, PV, TBA, FFA, TVB-N, SFA and MUFA increased compared to the fresh fish (unfrozen) as control samples. Also, sensory evaluation all of thawed samples showed a significant (p<0.05) quality loss compared to the fresh fish as control samples. The lowest chemical and biochemical values as well as microbial growth were determined in water thawed samples. Therefore, based on this study thawing in water is most suitable for frozen whole rainbow trout.

Indian squid, Uroteuthis duvauceli, is an important commercial marine fauna in the coastal waters of Oman Sea

About 3600 specimens were collected by bottom trawl at 15 sampling stations. 24 biometric characters were measured for each specimens at the laboratory.. Microscopic cross – sections of statolith were used for age determination. Sex determination and fecundity were determined. Population dynamics parameters as well as stock as stock assessment including cohort analysis were estimated using FISAT software. The findings showed that Dorsal Mantle Length (DML) and Body weight (BW) of the Indian squid were 133.9 ± 0.78 mm and 99.61 ± 0.95 g respectively. Strong correlation was found between these 2 variables (R2 = 0.90). The maximum age was 5 years. Relationship between DML and age was highly significantly of p ≤ 0.05. Overall sex ratio (M: F = 0.52) was significantly different from the expected 1:1 ratio (p ≤ 0.05). The ovary weight and nidamental glands weight were 7.72 ± 0.0006 g and 3.07 ± 0.0003g respectively. Absolute and relative fecundity of the Indian squid were found to be 122733 ± 30.87 and 2348 ± 0.4 respectively. GSI were 14.35 in April and 8.63 in July. This squid is therefore a spring spawner. The infinite dorsal mantle length were 258.62 mm for females, 194.72 mm for males and 252.02 for both sexes respectively. For population growth and mortality parameters; K (0.65 per year for both sexes, 0.85 per year for males, 0.65 per year for females); t0 (0.24year for both sexes, 0.22 year in females, 0.26 year in male); φ` (2.30 in both sexes, 2.47 for males, 2.37 for females); Z (1.17 per year for both sexes, 1.10 per year in females, 1.39 per year, in males); M (0.70 per year for both sexes, 0.90 for males, 0.67 for females); F(0.27 per year for both sexes, 0.27 per year in males, 0.195 per year in females). Exploitation coefficient were 0.51 per year for both sexes, 0.57 per year males and 0.51 per year females respectively. The results indicates that since the Indian squid is a short live aquatic organism, therefore, the exploitation coefficient could be raised to 0.7 per year. The analysis showed that total biomass and MSY were 10103.5 ton and 2576.4 ton respectively. These findings are the first study of its sort about the Indian squid in the coastal waters of Oman Sea as well as North-West of Indian Ocean.

Identification of biodiversity and distribution pattern of benthic Foraminifera and Ostracoda in continental shelf sediments of the Oman Sea

Biodiversity and distribution of benthic Foraminifera and Ostracoda in the continental shelf sediments of the Omman Sea was studied in order to indicating of the composition of benthic foraminiferal and ostracodal communities and determining of their relationship with the environmental factors of the Omman Sea. Sediment samples were gathered in winter 2006 from twelve stations ranging in depth from 30 to 103 meters. Environmental factors including depth, temperature, salinity, dissolved Oxygen and pH were measured with a CTD system during sampling time and grain size and total organic matter were measured in laboratory. From the overall 57 benthic foram species, there were 52 identified species belong to 25 genera of 16 families. The cosmopolitan foraminifer, Ammonia beccarii, was common in all sampling stations. The composition of benthic foram communities had a highly positive correlation with depth, salinity and total organic matter. From the overall 30 ostracod species, there were 26 identified species belong to 22 genera of 13 families. Diversity and aboundance of ostracoda of the Oman Sea decreased from east to west and from south to north but increased slightly in the northwest (near the Strait of Hormoz). Ostracoda of the genus Propontocypris were common in all sampling stations but the genera Cyprideis, Paradoxostom and Hemicytheridea were rare in the Oman Sea. Diversity and aboundance of ostracoda in northern regions were less than southern and were less than foraminifera too. The composition of ostracodal communities had a highly positive correlation with dept, salinity and grain size. Biodiversity and distribution pattern of benthic foraminifera and ostracoda were being different in various sampling stations, especially between northern and southern regions. Water depth, salinity and structure of the sediments were the most important abiotic factors controlling the distribution pattern of benthic foraminifera and ostracoda in the Omman Sea. None existence or rare observation of structural abnormalities and oil polluted individuals in the vicinity of all sampling stations, resulted to the "clean" benthic environment of the Omman Sea.

The study of ecological condition on productivity of Tajan River estuary in Mazandaran Province Caspian Sea

This project was done during a one-year period (2006-2007) with the aim of assessing and evaluating the susceptible and vulnerable habitat of Tajan River estuarine region as well as identifying its ecological features. This region consists of Tajan estuarine region as one of the sub-basins of the Caspian Sea basin which covers a surface of 2km2. In this assessment, 6 riverine estuarine and marine stations were chosen in which non-biotic parameters such as temperature, salinity, dissolved oxygen, pH and nutrients, and biotic parameters such as variation, density, plankton, primary production by chlorophyll-a. Benthos variation density, silt and the organic materials of the sediments were sampled and measured monthly. The amount of chlorophyll-a concentration and primary production showed a lot of seasonal changes at these stations which ranged from0.3 to 96 mg/m3. The results from the primary productions indicated that the eastern station of the estuary had high concentrations of chlorophyll-a during all seasons (96mg/m3). The most important and dominant planktonic groups in this region included Bacillariophyta from plankton and copepoda from zooplankton. The most important Benthos communities consisted of Driessena polymorpha.Cerastoderma lamarki in estuarine region,Chironomus plumosus in riverine region and Hypaniola sp. In marine region. Assessing the annual variation in these three riverine, estuarine and marine regions, phytoplankton with 3.1, Zooplankton with 2.7 and Benthos with 1.9 Showed the most density in the estuarine region. Assessing the annual density, phytoplanktonic (6118967 no . in m3) and zooplanktonic (7272 no . in m3) communities showed the most density in the marine region. Assessing the statistical tests showed that the estuarine and riverine regions had a significant difference in planktonic density (p<0.005) compared with the marine region. Moreover, The zeoplanktonic density in the marine region had a significant difference (p<0.005) with estuarine and riverine regions. Tooki test and one-way variance Analysis showed that in assessing the planktonic groups (p<0.005) and Benthos (p<0.005), there was a significant difference in variation index between river with estuary, and estuary with the sea. The amount of the total annual live biomass of the Benthos resource in Tajan river estuarine region was estimated 757.66 g/m2.