Soil characteristics and abundance of archaea in samples from the Ross Sea Region, Antarctica

The objective of this study was to examine the presence and diversity of Archaea within mineral and ornithogenic soils from 12 locations across the Ross Sea region. Archaea were not abundant but DNA sufficient for producing 16S rRNA gene clone libraries was extracted from 18 of 51 soil samples, from four locations. A total of 1452 clones were analysed by restriction fragment length polymorphism and assigned to 43 operational taxonomic units from which representatives were sequenced. Archaea were primarily restricted to coastal mineral soils which showed a predominance of Crenarchaeota belonging to group 1.1b (>99% of clones). These clones were assigned to six clusters (A through F), based on shared identity to sequences in the GenBank database. Ordination indicated that soil chemistry and water content determined archaeal community structure. This is the first comprehensive study of the archaeal community in Antarctic soils and as such provides a reference point for further investigation of microbial function in this environment.

Metabolism of mesozooplankton in the North-Eastern Aegean Sea during SES_GR2 in October 2008

The dataset is based on samples taken during October 2008 in the North-Eastern Aegean Sea. NH4 excretion rate: Mesozooplankton is collected by vertical tows within the Black sea water body mass layer in the NE Aegean, using a WP-2 200 µm net equipped with a large non-filtering cod-end (10 l). Macrozooplankton organisms are removed using a 2000 µm net. A few unsorted animals (approximately 100) are placed inside 8 bottles of 350 or 650 ml filled with GF/F or 0.2 µm Nucleopore filtered seawater and then on a wheell at dim light and maintaining the in situ temperature. 4 bottles without animals are used as control. After 24hours bottles are opened and water samples taken for NH4 chemical analysis. Then the bottle content is filtered on pre-combusted preweighted CF/F filters, which are then dried at 60 C and weighted. Calculations are made as described by Ikeda et al. (2000). Samples for the NH4 determination were collected in pre-cleaned 50 ml Duran bottles and analysed onboard immediately after collection. Ammonium concentration was measured on a Perkin Elmer Lambda 25 UV/VIS Spectrometer according to the method of Koroleff (1970). PO4 excretion rate: Mesozooplankton is collected by vertical tows within the Black sea water body mass layer in the NE Aegean, using a WP-2 200 µm net equipped with a large non-filtering cod-end (10 l). Macrozooplankton organisms are removed using a 2000 µm net. A few unsorted animals (approximately 100) are placed inside 8 bottles of 350 or 650 ml filled with GF/F or 0.2 µm Nucleopore filtered seawater and then on a wheell at dim light and maintaining the in situ temperature. 4 bottles without animals are used as control. After 24hours bottles are opened and water samples taken for PO4 chemical analysis. Then the bottle content is filtered on pre-combusted preweighted CF/F filters, which are then dried at 60 C and weighted. Calculations are made as described by Ikeda et al. (2000). Samples for the determination of PO4 were collected in pre-cleaned 50 ml polyethylene volumetric tubes and analysed on board immediately after collection. PO4 concentration was measured on a Perkin Elmer Lambda 25 UV/VIS Spectrometer following the protocol of Murphy and Riley (1962). O2 consumption rate: Mesozooplankton is collected by vertical tows within the Black sea water body mass layer in the NE Aegean, using a WP-2 200 µm net equipped with a large non-filtering cod-end (10 l). Macrozooplankton organisms are removed using a 2000 µm net. A few unsorted animals (approximately 100) are placed inside 8 bottles of 350 or 650 ml filled with GF/F or 0.2 µm Nucleopore filtered seawater and then on a wheell at dim light and maintaining the in situ temperature. 4 bottles without animals are used as control. After 24hours bottles are opened and water samples taken for O2 chemical analysis. Then the bottle content is filtered on pre-combusted preweighted CF/F filters, which are then dried at 60 C and weighted. Calculations are made as described by Ikeda et al. (2000). For the dissolved O2 determination, the samples were fixed immediately after collection and analysed with the Winkler method as modified by Carpenter (1965a and 1965b). Carbon specific CO2 respiration rate: O2 consumption rate was converted to CO2 production using a RQ value of 0.87 (Mayzaud et al. 2005). Conversion of mesozooplankton dry weight to carbon was done using the % of carbon content measured in the same station from the SESAME dataset of zooplankton biomass. Carbon specific NH4 excretion rate: Conversion of mesozooplankton dry weight to carbon was done using the % of carbon content measured in the same station from the SESAME dataset of zooplankton biomass. Carbon specific PO4 excretion rate: Conversion of mesozooplankton dry weight to carbon was done using the % of carbon content measured in the same station from the SESAME dataset of zooplankton biomass.

Age determination of the rhyolites of the Lord Howe Rise in the Southwest Pacific Ocean

Drilling at site 207 (DSDP Leg 21), located on the broad summit of the Lord Howe Rise, bottomed in rhyolitic rocks. Sanidine concentrates from four samples of the rhyolite were dated by the 40Ar/39Ar total fusion method and conventional K-Ar method, and yielded concordant ages of 93.7 +/- 1.1 my, equivalent to the early part of the Upper Cretaceous. At this time the Lord Howe Rise, which has continental-type structure, is thought to have been emergent and adjacent to the eastern margin of the Australian-antarctic continent. Subsequent to 94 my ago and prior to deposition of Maastrichtian (70-65 myBP) marine sediments on top of the rhyolitic basement of the Lord Howe Rise, rifting occurred and the formation of the Tasman Basin began by sea-floor spreading with rotation of the Rise away from the margin of Australia. Subsidence of the Rise continued until Early Eocene (about 50 myBP), probably marking the end of sea-floor spreading in the Tasman Basin. These large scale movements relate to the breakup of this part of Gondwanaland in the Upper Cretaceous.

Phytoplankton in the Nhatrang Bay, South China Sea

Species composition, phytoplankton abundance, and relative yield of variable fluorescence (F_v/F_m) were determined in the mesotrophic Nhatrang Bay in October-November 2004. Species diversity (250 taxonomic units) and heterogeneity of the phytoplankton structure were high. With respect to number of species and their abundance, diatoms prevailed. In selected parts of the bay, dinoflagellates dominated. Average biomass in the water column under 1 m**2 (Bt) varied from 2.3 to 64.4 mg C/m**3 (av. 31.0 mg C/m**3). Bt values were the lowest at stations nearest to the river mouth. Seaward, Bt increased. Bt values increased with depth at some stations and decreased at others. In surface layers biomass was lower than that in the underlying waters. F_v/F_m values ranged from 0.10 to 0.64 (av. 0.49). The lowest F_v/F_m values were observed in the area close to the seaport. Over greater part of the bay, F_v/F_m values were higher than 0.47. Such values are indicative of relatively high potential of photosynthetic activity of phytoplankton. Abundance and species diversity were higher than those in the dry season (March-April).