Addizioni organocatalitiche asimmetriche di 1,3-dicarbonili a orto-chinoni metidi. Un nuovo metodo per la sintesi di 3,4-diidrocumarine e 4h-cromeni otticamente attivi

Questa tesi descrive lo sviluppo di una nuova metodologia che prevede l’utilizzo degli orto-chinoni metidi (o-QMs) in reazioni organocatalitiche asimmetriche. A causa della loro elevata instabilità e reattività, gli o-QMs sono stati impiegati in trasformazioni di sintesi asimmetrica solo di recente. Il metodo sviluppato prevede l’utilizzo di catalizzatori bifunzionali in grado di promuovere la generazione in situ degli intermedi reattivi a partire dai rispettivi 2-solfonilalchil fenoli, tramite eliminazione di acido solfinico. L’utilizzo di condizioni blandamente basiche sia per generare gli o-QMs che per l’attivazione dei partner nucleofili, risulta innovativo e permette non solo di ovviare all’intrinseca instabilità di questi intermedi, ma anche di impiegarli efficacemente in reazioni organocatalitiche con una varietà di nucleofili, come, ad esempio, l’acido di Meldrum, il malononitrile e vari composti 1,3 dicarbonilici. Le reazioni catalitiche portano alla formazione di 3,4-diidrocumarine, 4H-cromeni e xantenoni enantioarricchiti. Alcuni di questi composti sono dei precursori sintetici di composti naturali o sintetici biologicamente attivi e per avvalorare questa metodologia sono state proposte le sintesi formali di tre composti di interesse biologico: la (R)-tolterodina (il principio attivo del farmaco antimuscarinico Detrol®), (S)-4-metossidalbergione (allergene della Dalbergia Nigra) and SB-209670 / SB-217242 (due potenti antagonisti dell’endotelina).

Quantum Mechnical Investion of Cyclic 3',5'- Adenosine Monophosphate, the Second Hormonal Messenger

Full geometry optimizations using the PM3, AM1, 3-21G∗/HF and 6-31G∗/HF levels of theory were conducted on the syn and anti conformations of cyclic3′,5′-adenosine monophosphate (cAMP). Comparison of the anti crystal structures with the semiempirical and ab initio results revealed that the ab initio results agree well with the experimental results. The results of semiempirical calculations are in qualitative agreement with experimental and ab initio values, with the exception of the glycosyl torsion angle for the anti conformer. Sugar puckering, which is not handled properly by semiempirical methods for unconstrained sugars, nucleosides, nucleotides and nucleotide base pairs, is modeled reasonably well by the semiempirical methods for cAMP. This improvement results from the constraints introduced by the cyclization of AMP to form the phosphodiester.

Use of the Supermolecule Approach To Model the Syn and Anti Conformations of Solvated Cyclic 3‘,5‘-Adenosine Monophosphate

The supermolecule approach has been used to model the hydration of cyclic 3‘,5‘-adenosine monophosphate, cAMP. Model building combined with PM3 optimizations predict that the anti conformer of cAMP is capable of hydrogen bonding to an additional solvent water molecule compared to the syn conformer. The addition of one water to the syn superstructure with concurrent rotation of the base about the glycosyl bond to form the anti superstructure leads to an additional enthalpy of stabilization of approximately −6 kcal/mol at the PM3 level. This specific solute−solvent interaction is an example of a large solvent effect, as the method predicts that cAMP has a conformational preference for the anti isomer in solution. This conformational preference results from a change in the number of specific solute−solvent interactions in this system. This prediction could be tested by NMR techniques. The number of waters predicted to be in the first hydration sphere around cAMP is in agreement with the results of hydration studies of nucleotides in DNA. In addition, the detailed picture of solvation about this cyclic nucleotide is in agreement with infrared experimental results.

Global Search for Minimum Energy (H2O)n Clusters, n = 3−5

The Gaussian-3 (G3) model chemistry method has been used to calculate the relative ΔG° values for all possible conformers of neutral clusters of water, (H2O)n, where n = 3−5. A complete 12-fold conformational search around each hydrogen bond produced 144, 1728, and 20 736 initial starting structures of the water trimer, tetramer, and pentamer. These structures were optimized with PM3, followed by HF/6-31G* optimization, and then with the G3 model chemistry. Only two trimers are present on the G3 potential energy hypersurface. We identified 5 tetramers and 10 pentamers on the potential energy and free-energy hypersurfaces at 298 K. None of these 17 structures were linear; all linear starting models folded into cyclic or three-dimensional structures. The cyclic pentamer is the most stable isomer at 298 K. On the basis of this and previous studies, we expect the cyclic tetramers and pentamers to be the most significant cyclic water clusters in the atmosphere.