Upgrading a TCABR data analysis and acquisition system for remote participation using Java, XML, RCP and modern client/server communication/authentication

The TCABR data analysis and acquisition system has been upgraded to support a joint research programme using remote participation technologies. The architecture of the new system uses Java language as programming environment. Since application parameters and hardware in a joint experiment are complex with a large variability of components, requirements and specification solutions need to be flexible and modular, independent from operating system and computer architecture. To describe and organize the information on all the components and the connections among them, systems are developed using the extensible Markup Language (XML) technology. The communication between clients and servers uses remote procedure call (RPC) based on the XML (RPC-XML technology). The integration among Java language, XML and RPC-XML technologies allows to develop easily a standard data and communication access layer between users and laboratories using common software libraries and Web application. The libraries allow data retrieval using the same methods for all user laboratories in the joint collaboration, and the Web application allows a simple graphical user interface (GUI) access. The TCABR tokamak team in collaboration with the IPFN (Instituto de Plasmas e Fusao Nuclear, Instituto Superior Tecnico, Universidade Tecnica de Lisboa) is implementing this remote participation technologies. The first version was tested at the Joint Experiment on TCABR (TCABRJE), a Host Laboratory Experiment, organized in cooperation with the IAEA (International Atomic Energy Agency) in the framework of the IAEA Coordinated Research Project (CRP) on ""Joint Research Using Small Tokamaks"". (C) 2010 Elsevier B.V. All rights reserved.

Uma abordagem Bottom-UP para a integração semântica de esquemas XML

XML (eXtensibile Markup Language) é um padrão atual para representação e intercâmbio dos semi-estruturados na Web. Dados semi-estruturados são dados não convencionais cujas instâncias de uma mesma fonte de dados podem ter representações altamente heterogêneas. Em função isto, um esquema para estes dados tende a ser extenso para suportar todas as alternativas de representação que um dado pode assumir. Parte do grande volume de dados disponível hoje na Web é composto por fontes de dados heterogêneas XML sobre diversos domínios do conhecimento. Para realizar o acesso a estas fontes, aplicações na Web necessitam de um mecanismo de integração de dados. O objetivo principal deste mecanismo é disponibilizar um esquema de dados global representativo dos diversos esquemas XML das fontes de dados. Com base neste esquema global, consultas são formuladas, traduzidas para consultas sobre os esquemas XML, executadas nas fontes de dados e os resultados retornados à aplicação. Esta tese apresenta uma abordagem para a integração semântica de esquemas XML relativos a um domínio de aplicação chamada BInXS. BInXS adota um processo bottom-up de integração, no qual o esquema global é definido para um conjunto de esquemas XML representadas atrtavés de DTDs (Document Type Definitions). A vantagem do processo bottom-up é que todas as informações dos esquemas XML são consideradas no esquema global. Desta forma, toda a informação presente nas fontes de dados pode ser consultada. O processo de integração de BInXS é baseado em um conjunto de regras e algoritmos que realizam a cnversão de cada DTD para um esquema canônico conceitual e a posterior integração semântica propriamente dita destes esquemas canônicos. O processo é semi-automático pois considera uma eventual intervenção de um usuário especialista no domínio para validar ou confirmar alternativas de resultado produzidas automaticamente. Comparada com trabalhos relacionados, BInXS apresenta as seguintes contribuições: (i) uma representação canônica conceitual para esquemas XML que é o resultado de uma anállise detalhada do modelo XML; (ii) um étodo de unificação que lida com as particularidades da integração de dados semi-estruturados e; (iii) uma estratégia de mapeamento baseada em expressões de consulta XPath que possibilita uma tradução simples de consultas globais para consultas a serem executadas nas fontes de dados XML.

Desenvolvimento de um esquema XML para banco de dados sobre ovinos

Este trabalho utilizou tecnologias tais como XML (eXtensible Markup Language) e esquemas XML, com objetivo de aprimorar a ovinocultura tornando o setor primário mais competitivo. Foram elaborados arquivos XML com a mesma estrutura (equivalentes) dos arquivos primitivos da Associação Brasileira de Criadores de Ovinos ( A.R.C.O. ), para que os mesmos possam ser disponibilizados na Internet. Para obter a integridade destes dados na Internet criou-se os esquemas XML, que são arquivos contendo as regras de formação dos dados. Os arquivos XML ficarão protegidos contra dados indesejáveis e disponíveis ao produtor rural via Internet.

Organização e armazenamento de conteúdo instrucional no ambiente AdaptWeb utilizando XML

O uso da Internet como ferramenta de ensino tem se tornado cada vez mais freqüente. A recente popularização da Internet vem permitindo o desenvolvimento de ambientes de ensino-aprendizagem baseados na Web. Os principais recursos explorados para fins educacionais são hipertexto e hipermídia, que proporcionam uma grande gama de elementos para o instrutor que pretende utilizar a WWW. Este trabalho está inserido no desenvolvimento do ambiente AdaptWeb (Ambiente de Ensino e Aprendizagem Adaptativo para a Web), que visa o desenvolvimento de um ambiente de educação a distância. A arquitetura do ambiente é composta por quatro módulos entre eles o módulo de Armazenamento de dados que armazena todos os dados provenientes da fase de Autoria utilizando XML (Extensible Markup Language). Na etapa de Autoria é feita a inserção de todos os dados relativos a disciplina que deseja disponibilizar, estes dados serão armazenados temporariamente em uma representação matricial em memória. A entrada de dados do módulo de Armazenamento de Dados é esta representação matricial que serve então como base para a geração dos arquivos XML, que são utilizados nas demais etapas do ambiente. Para a validação dos arquivos XML foram desenvolvidas DTD (Document Type Definition) e também foi implementado um analisador de documentos XML, utilizando a API (Application Programming Interface) DOM (Document Object Model), para efetuar a validação sintática destes documentos. Para conversão da representação matricial em memória foi especificado e implementado um algoritmo que funciona em conformidade com as DTD especificadas e com a sintaxe da linguagem XML.

From XML to relational view updates: applying old solutions to solve a new problem

XML has become an important medium for data exchange, and is frequently used as an interface to - i.e. a view of - a relational database. Although lots of work have been done on querying relational databases through XML views, the problem of updating relational databases through XML views has not received much attention. In this work, we give the rst steps towards solving this problem. Using query trees to capture the notions of selection, projection, nesting, grouping, and heterogeneous sets found throughout most XML query languages, we show how XML views expressed using query trees can be mapped to a set of corresponding relational views. Thus, we transform the problem of updating relational databases through XML views into a classical problem of updating relational databases through relational views. We then show how updates on the XML view are mapped to updates on the corresponding relational views. Existing work on updating relational views can then be leveraged to determine whether or not the relational views are updatable with respect to the relational updates, and if so, to translate the updates to the underlying relational database. Since query trees are a formal characterization of view de nition queries, they are not well suited for end-users. We then investigate how a subset of XQuery can be used as a top level language, and show how query trees can be used as an intermediate representation of view de nitions expressed in this subset.

Conversão de registros em XML para MARC 21: um modelo baseado em folhas de estilo XSLT

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

MARC 21 e XML como ferramentas para a consolidação da catalogação cooperativa automatizada: Uma revisão de literatura

The cooperation and the sharing of information cataloguing and bibliographical in environment automated, this was only possible with the creation and adoption of interchange format MARC21. But due to the progresses of the technologies of information and communication, of the crescent use of Internet and of the databases and databanks, there were the need of the creation and development of tools that optimize the organization activities, retrieval and interchange of information. XML is one of those developments that have as purpose to facilitate the management, storage and transmission of data through Internet. Before that, it was proposed through a literature revision, to analyze Interchange Format MARC21 and Markup Language XML as tools for the consolidation of the Automated Cooperative Cataloguing, your differences of storage flexibilities, organization, retrieval and interchange of data through Internet. This research made possible the divulgation to the community librarian, through a literature revision, that has been discussed internationally on MARC21 and XML

Analisi di riferimenti bibliografici in documenti XML

Con il seguente elaborato propongo di presentare il lavoro svolto sui documenti XML che ci sono stati forniti. Più nello specifico, il lavoro è incentrato sui riferimenti bibliografici presenti in ogni documento e ha come fine l'elaborazione delle informazioni estrapolate al fine di poterle esportare nel formato RDF (Resource Description Framework). I documenti XML (eXtensible Markup Language) fornitimi provengono dalla casa editrice Elsevier, una delle più grandi case editrici di articoli scientifici organizzati in riviste specializzate (journal).

The Design of XML-Based Model and Experiment Description Languages for Network Simulation

The Simulation Automation Framework for Experiments (SAFE) is a project created to raise the level of abstraction in network simulation tools and thereby address issues that undermine credibility. SAFE incorporates best practices in network simulationto automate the experimental process and to guide users in the development of sound scientific studies using the popular ns-3 network simulator. My contributions to the SAFE project: the design of two XML-based languages called NEDL (ns-3 Experiment Description Language) and NSTL (ns-3 Script Templating Language), which facilitate the description of experiments and network simulationmodels, respectively. The languages provide a foundation for the construction of better interfaces between the user and the ns-3 simulator. They also provide input to a mechanism which automates the execution of network simulation experiments. Additionally,this thesis demonstrates that one can develop tools to generate ns-3 scripts in Python or C++ automatically from NSTL model descriptions.

XML for Model Specification in Neuroscience

One of the main roles of the Neural Open Markup Language, NeuroML, is to facilitate cooperation in building, simulating, testing and publishing models of channels, neurons and networks of neurons. MorphML, which was developed as a common format for exchange of neural morphology data, is distributed as part of NeuroML but can be used as a stand-alone application. In this collection of tutorials and workshop summary, we provide an overview of these XML schemas and provide examples of their use in down-stream applications. We also summarize plans for the further development of XML specifications for modeling channels, channel distributions, and network connectivity.

XSAMPL3D: An Action Description Language for the Animation of Virtual Characters

In this paper we present XSAMPL3D, a novel language for the high-level representation of actions performed on objects by (virtual) humans. XSAMPL3D was designed to serve as action representation language in an imitation-based approach to character animation: First, a human demonstrates a sequence of object manipulations in an immersive Virtual Reality (VR) environment. From this demonstration, an XSAMPL3D description is automatically derived that represents the actions in terms of high-level action types and involved objects. The XSAMPL3D action description can then be used for the synthesis of animations where virtual humans of different body sizes and proportions reproduce the demonstrated action. Actions are encoded in a compact and human-readable XML-format. Thus, XSAMPL3D describtions are also amenable to manual authoring, e.g. for rapid prototyping of animations when no immersive VR environment is at the animator's disposal. However, when XSAMPL3D descriptions are derived from VR interactions, they can accomodate many details of the demonstrated action, such as motion trajectiories,hand shapes and other hand-object relations during grasping. Such detail would be hard to specify with manual motion authoring techniques only. Through the inclusion of language features that allow the representation of all relevant aspects of demonstrated object manipulations, XSAMPL3D is a suitable action representation language for the imitation-based approach to character animation.

10001 manuscripts in practice: Perl, XML, medieval chronicles, and why Unicode rocks‎

I work in the field of Armenian historiography. This means I get to play with medieval manuscripts. The things I'm doing with the manuscripts are theoretically interesting, but pretty boring in practice, so I'm using Perl to program away the most boring bits. I will talk about the problems of text criticism in general, what sorts of things can and can't be done by the computer, my initial aversion to XML, how I was shown (some of) the error of my ways, and how I'm combining a bunch of isolated pieces of technology that were mostly already in use to achieve fame and fortune in the world of Armenian studies.

Diseño de una herramienta de inferencia de esquemas XML

A día de hoy, XML (Extensible Markup Language) es uno de los formatos más utilizados para el intercambio y almacenamiento de información estructurada en la World Wide Web. Es habitual que las aplicaciones que utilizan archivos XML presupongan en ellos una estructura determinada, pudiendo producirse errores si se intentase emplear documentos que no la cumplan. A fin de poder expresar este tipo de limitaciones y poder verificar que un documento las cumple, se definió en el mismo estándar XML el DTD, si bien pronto se mostró bastante limitado en cuanto a su capacidad expresiva. Es por este motivo que se decidió crear el XML Schema, un lenguaje XML para definir qué estructura deben tener otros documentos XML. Contar con un esquema tiene múltiples ventajas, siendo la principal de ellas el poder validar documentos contra él para comprobar si su estructura es correcta u otras como la generación automática de código. Sin embargo, definir una estructura común a varios documentos XML de una manera óptima puede convertirse en una tarea ardua si se hace de manera manual. Este problema puede salvarse contando con una herramienta que automatice el proceso de creación de dichos XSDs. En este proyecto, desarrollaremos una herramienta en Java que, a partir de una serie de documentos XML de entrada, inferirá automáticamente un esquema contra el que validen todos ellos, expresando su estructura de manera completa y concisa. Dicha herramienta permitirá elegir varios parámetros de inferencia, a fin de que el esquema generado se adapte lo más posible a los propósitos del usuario. Esta herramienta generará también una serie de estadísticas adicionales, que permitirán conocer más información sobre los ficheros de entrada.

Modeling geometric rules in object based models:an XML / GML approach

Most object-based approaches to Geographical Information Systems (GIS) have concentrated on the representation of geometric properties of objects in terms of fixed geometry. In our road traffic marking application domain we have a requirement to represent the static locations of the road markings but also enforce the associated regulations, which are typically geometric in nature. For example a give way line of a pedestrian crossing in the UK must be within 1100-3000 mm of the edge of the crossing pattern. In previous studies of the application of spatial rules (often called 'business logic') in GIS emphasis has been placed on the representation of topological constraints and data integrity checks. There is very little GIS literature that describes models for geometric rules, although there are some examples in the Computer Aided Design (CAD) literature. This paper introduces some of the ideas from so called variational CAD models to the GIS application domain, and extends these using a Geography Markup Language (GML) based representation. In our application we have an additional requirement; the geometric rules are often changed and vary from country to country so should be represented in a flexible manner. In this paper we describe an elegant solution to the representation of geometric rules, such as requiring lines to be offset from other objects. The method uses a feature-property model embraced in GML 3.1 and extends the possible relationships in feature collections to permit the application of parameterized geometric constraints to sub features. We show the parametric rule model we have developed and discuss the advantage of using simple parametric expressions in the rule base. We discuss the possibilities and limitations of our approach and relate our data model to GML 3.1. © 2006 Springer-Verlag Berlin Heidelberg.

Representing human expertise by the OWL web ontology language to support knowledge engineering in decision support systems

Clinical decision support systems (CDSSs) often base their knowledge and advice on human expertise. Knowledge representation needs to be in a format that can be easily understood by human users as well as supporting ongoing knowledge engineering, including evolution and consistency of knowledge. This paper reports on the development of an ontology specification for managing knowledge engineering in a CDSS for assessing and managing risks associated with mental-health problems. The Galatean Risk and Safety Tool, GRiST, represents mental-health expertise in the form of a psychological model of classification. The hierarchical structure was directly represented in the machine using an XML document. Functionality of the model and knowledge management were controlled using attributes in the XML nodes, with an accompanying paper manual for specifying how end-user tools should behave when interfacing with the XML. This paper explains the advantages of using the web-ontology language, OWL, as the specification, details some of the issues and problems encountered in translating the psychological model to OWL, and shows how OWL benefits knowledge engineering. The conclusions are that OWL can have an important role in managing complex knowledge domains for systems based on human expertise without impeding the end-users' understanding of the knowledge base. The generic classification model underpinning GRiST makes it applicable to many decision domains and the accompanying OWL specification facilitates its implementation.