Soil aggregation and organic carbon of Oxisols under coffee in agroforestry systems

Intensive land use can lead to a loss of soil physical quality with negative impacts on soil aggregates, resistance to root penetration, porosity, and bulk density. Organic and agroforestry management systems can represent sustainable, well-balanced alternatives in the agroecosystem for promoting a greater input of organic matter than the conventional system. Based on the hypothesis that an increased input of organic matter improves soil physical quality, this study aimed to evaluate the impact of coffee production systems on soil physical properties in two Red-Yellow Oxisols (Latossolos Vermelho-Amarelos) in the region of Caparaó, Espirito Santo, Brazil. On Farm 1, we evaluated the following systems: primary forest (Pf1), organic coffee (Org1) and conventional coffee (Con1). On Farm 2, we evaluated: secondary forest (Sf2), organic coffee intercropped with inga (Org/In2), organic coffee intercropped with leucaena and inga (Org/In/Le2), organic coffee intercropped with cedar (Org/Ced2) and unshaded conventional coffee (Con2). Soil samples were collected under the tree canopy from the 0-10, 10-20 and 20-40 cm soil layers. Under organic and agroforestry coffee management, soil aggregation was higher than under conventional coffee. In the agroforestry system, the degree of soil flocculation was 24 % higher, soil moisture was 80 % higher, and soil resistance to penetration was lower than in soil under conventional coffee management. The macroaggregates in the organic systems, Org/In2, Org/In/Le2, and Org/Ced2 contained, on average, 29.1, 40.1 and 34.7 g kg-1 organic carbon, respectively. These levels are higher than those found in the unshaded conventional system (Con2), with 20.2 g kg-1.

Phosphorus Forms in Ultisol Submitted to Burning and Trituration of Vegetation in Eastern Amazon

ABSTRACT The use of fire to prepare agricultural areas is a technique still used by small farmers in eastern Amazon. This type of management changes the dynamics of soil nutrients, especially phosphorus, which constitutes the most limiting nutrient for crop production in tropical soils. This study was carried out to evaluate changes in phosphorus forms in an Argissolo Amarelo Distrófico (Ultisol) submitted to burning and trituration of secondary forest in eastern Amazon. The evaluated systems were: slash-and-burn of vegetation; slash-and-mulch of vegetation; and secondary vegetation. The labile, moderately labile, moderately recalcitrant, available and total phosphorus fractions were assessed at the soil depths of 0.00-0.05, 0.05-0.10 and 0.10-0.20 m. The results showed a predominance of soluble P in acid (moderately labile P) over other forms in all management systems. The management systems influence the content and distribution of the forms of P, where the slash-and-mulch system presented the prevalence of the labile fraction, and the slash-and-burn system contained less labile forms. The slash-and-mulch system favored the accumulation of labile P and total organic P.

Phosphorus analysis in soil under herbaceous perennial leguminous cover by nuclear magnetic spectroscopy

The availability and the reserves of organic phosphorus are controlled by its mineralization rate and are also influenced by changes in soil management. The objective of this study was to evaluate the influence of soil covering with different leguminous plant on soil organic P by 31P-NMR spectroscopy. Alkaline soil extracts were obtained from two depths (0-5 and 5-10 cm) of an Ultisol cultivated with herbaceous perennial leguminous plants (Arachis pintoi, Pueraria phaseoloides, Macroptilium atropurpureum). In an adjacent area, samples of the same soil cover with a secondary tropical forest and grass (Panicum maximum) were also collected. The leguminous management was divided into with removal and without removal of shoot parts after cut on soil surface. Phosphate monoesters are the dominant P species in all soil samples and P diesters accumulated on the superficial layer of secondary forest soil. The P amount of this fraction is higher for the legume covered soil when compared with the grass covered soil. The permanence of leguminous plants on the topsoil after the cut promoted an increase in P diester/P monoester ratios. These findings can be accounted for an enhancement of P availability to plants in soils cultivated with leguminous plants.

Occurrence of Symphyla (Myriapoda) in the region of the Upper Solimões River, Amazonas, Brazil

The present work aimed at identifying the Symphyla species diversity and abundance in various land-use systems under different degrees of intensification in western Amazonia. This is the first inventory of Symphyla in primary and secondary forest, crops, agroforestry systems and pastures which was carried out in Benjamin Constant municipality, in the region of the Upper Solimões River, Brazil. Samples (n = 101) were collected using a metal corer, and the symphylan extraction was carried out using Berlese-Tullgren funnels. Two genera and three species of symphylans were encountered. Considering the diversity encountered in Amazonian inventories, with only four genera and five known species overall, the three species found in the present study are considered a reasonable representation of the regional diversity. Two of the Hanseniella species found have been known to cause plant damage.

The earthworm fauna of regenerating forests and anthropogenic habitats in the coastal region of Paraná

The aim of this study was to evaluate abundance, biomass and diversity of earthworms in the southern coast region of the Mata Atlântica biodiversity hotspot. A total of 51 study sites in pastures, banana monocultures, mixed agroforestry systems, secondary forests in succession and old-growth forests near the coast of Paraná, Brazil, were evaluated. Each site was sampled once. Species richness of the earthworms was generally low and varied little between sites. At all sites except for one, the peregrine species Pontoscolex corethrurus (Glossoscolecidae) strongly dominated. Three other peregrine species, Amynthas corticis, Amynthas gracilis (Megascolecidae) and Ocnerodrilus occidentalis (Ocnerodrilidae), were frequent in moist sites. No autochthonous species were found. Abundance and biomass of earthworms varied strongly within and between sites (0-338 individuals m-2, 0-96 g m-2 fresh weight). Pastures had significantly lower abundance than all other sites. The forest sites had similar earthworm abundance and biomass, with a tendency to be higher in younger succession stages. The coastal plain region has been strongly altered by human activities. Reasons for the lack of any autochthonous species and the dominance of one peregrine species require further investigation.

Bioindicators of soil quality in coffee organic cultivation systems

The objective of this work was to assess the effect of different coffee organic cultivation systems on chemical and biological soil characteristics, in different seasons of the year. The following systems were evaluated: coffee intercropped with one (CJ1), two (CJ2) or three (CJ3) pigeon pea (Cajanus cajan) alleys; coffee planted under full sun (CS); area planted with sweet pepper and snap bean in a conventional tillage system (AC); and secondary forest area (FFR). Row spacing in CJ1, CJ2, CJ3 and CS was 2.0x1.0, 2.8x1.0, 3.6x1.0, and 2.8x1.0 m, respectively. Soil samples were collected at 10-cm depth, during the four seasons of the year. The results were subjected to analysis of variance, principal component analysis, and redundancy analysis. There was an increase in edaphic macrofauna, soil basal respiration, and microbial quotient in the summer. Total macrofauna density was greater in CJ2 followed by CJ3, CS, CJ1, AC and FFR; Coleoptera, Formicidae, and Isoptera were the most abundant groups. There are no significant differences among the areas for soil basal respiration, and the metabolic quotient is higher in CJ1, CJ3, and FFR. Microbial biomass carbon and the contents of K, pH, Ca+Mg, and P show greater values in AC.

Functional diversity of bacterial genes associated with aromatic hydrocarbon degradation in anthropogenic dark earth of Amazonia

The objective of this work was to evaluate the catabolic gene diversity for the bacterial degradation of aromatic hydrocarbons in anthropogenic dark earth of Amazonia (ADE) and their biochar (BC). Functional diversity analyses in ADE soils can provide information on how adaptive microorganisms may influence the fertility of soils and what is their involvement in biogeochemical cycles. For this, clone libraries containing the gene encoding for the alpha subunit of aromatic ring-hydroxylating dioxygenases (α-ARHD bacterial gene) were constructed, totaling 800 clones. These libraries were prepared from samples of an ADE soil under two different land uses, located at the Caldeirão Experimental Station - secondary forest (SF) and agriculture (AG) -, and the biochar (SF_BC and AG_BC, respectively). Heterogeneity estimates indicated greater diversity in BC libraries; and Venn diagrams showed more unique operational protein clusters (OPC) in the SF_BC library than the ADE soil, which indicates that specific metabolic processes may occur in biochar. Phylogenetic analysis showed unidentified dioxygenases in ADE soils. Libraries containing functional gene encoding for the alpha subunit of the aromatic ring-hydroxylating dioxygenases (ARHD) gene from biochar show higher diversity indices than those of ADE under secondary forest and agriculture.

Floração e chuva de sementes em mata secundária em São Paulo, SP

(Floração e chuva de sementes em mata secundária em São Paulo, SP). O florescimento e a chuva de sementes foram estudados em trecho de mata secundária em São Paulo, SP, através da coleta de material reprodutivo depositado em peneiras de 0,5 x 0,5 m, recolhido mensalmente entre janeiro e dezembro de 1993. Foram identificadas 90 espécies pertencentes a 37 famílias. Observaram-se padrões sazonais de floração e de frutificação, sendo que a maioria das espécies floresceu a partir de setembro, com picos de floração e de frutificação em novembro. O padrão de floração encontrado foi o mesmo verificado em outras florestas da região, sendo o de frutificação mais sazonal. Na chuva de sementes, as espécies anemocóricas dispersaram propágulos predominantemente em novembro, no início das chuvas e não durante a estação seca, como esperado. A maioria das espécies zoocóricas liberou propágulos durante o meio da estação chuvosa, com pico em janeiro, na época de melhores condições de amadurecimento do fruto, dispersão de sementes e estabelecimento de plântulas. As lianas produziram a maior quantidade de propágulos, enquanto das arbóreas obteve-se o maior número de espécies.

Fungos filamentosos em folhas do ambiente terrestre e aquático da Ilha dos Eucaliptos, Represa do Guarapiranga, São Paulo, SP

A diversidade e a ocorrência de fungos em folhas em decomposição nos ambientes terrestre e aquático foram estudadas durante o verão e inverno sob floresta de Eucalyptus spp., mata secundária e mata de interseção na Ilha dos Eucaliptos, Represa do Guarapiranga, São Paulo, SP. Um total de 41 táxons de fungos filamentosos (98 ocorrências) foram encontrados, dos quais 36 pertenciam ao grupo dos fungos mitospóricos, quatro à Zygomycota e um à Ascomycota, através do método de lavagem de discos de folhas seguido por plaqueamento em meio de cultura. Deste total, foram registrados 28 táxons (37 ocorrências) na área dos Eucalyptus spp., 21 táxons (33 ocorrências) na área da mata secundária e 20 táxons (28 ocorrências) na mata intermediária. As folhas submersas apresentaram micota mais diversificada, composta por 35 táxons (58 ocorrências), enquanto que a micota das folhas sobre o solo aumentou somente 19 táxons (40 ocorrências). O índice de Sorensen revelou uma maior similaridade (58,54%) entre as micotas da mata de interseção e a da mata secundária, seguida pela mata de interseção e a floresta dos Eucalyptus spp. (54,17%). As micotas da floresta de Eucalyptus spp. e a da mata secundária foram as mais diferentes entre si (similaridade = 44,9%). Concomitantemente às coletas das folhas submersas, foram determinados alguns parâmetros abióticos na água, como temperatura a 10 cm de profundidade, pH e teor de oxigênio dissolvido. As médias foram comparadas por análise de variância (ANOVA). No verão, estas variáveis foram significativamente mais elevadas na mata secundária do que nas outras áreas. Há indícios de que o tipo de vegetação e a sazonalidade atuem significativamente sobre os fungos decompositores das folhas. De acordo com os resultados, observa-se que a Ilha dos Eucaliptos oferece condições para o desenvolvimento de uma micota diversificada e com elevados índices de ocorrências, sendo local adequado para estudos mais amplos sobre os fungos sapróbios em sistemas lênticos.

Spatial distribution and preferential substrate of Neoregelia johannis (Carriére) L.B. Smith (Bromeliaceae) in a disturbed area of Atlantic Rainforest at Ilha Grande, RJ, Brazil

In bromeliad populations, amount of light and available substrates influence individuals spatial organization. In Atlantic Rainforest of Ilha Grande, the heliophylous bromeliad Neoregelia johannis is a large and abundant species. In this forest, it would be expected that N. johannis would occupy stable substrates, as large trunks, large branches, rock boulders or ground, with high sunlight, enough for the bromeliad survivor. In the present work, we analyzed the distribution and most used substrates of N. johannis in secondary forest. We analyzed the frequency of reproductive modes (sexual and vegetative) used by the bromeliad shoots, registering if the shoots were originated from seeds or by vegetative reproduction. The results indicated an aggregated distribution pattern (Ip = 0.052). The preferred substrate was boulders (91%), whereas tree trunks (6%) and the ground (3%) were rarely used. Small and fragile substrates are unstable to support large adults of this species, which may explain the predominant pattern of establishment over boulders within the secondary forest, as the presence of this substrate also results in more opened canopy cover. Approximately 50% of young individuals entered the population by vegetative reproduction. We conclude that the preferential habit and the aggregated distribution of N. johannis are due to the conjunction of preferred substrate with higher amount of light resulting from breaks in tree canopy over areas with rock blocks, and high frequency of recruitment by vegetative reproduction.

A invasão de um fragmento florestal em São Paulo (SP) pela palmeira australiana Archontophoenix cunninghamiana H. Wendl. & Drude

Invasões biológicas são uma ameaça à manutenção da diversidade biológica, especialmente em fragmentos de hábitat pequenos e isolados. Este trabalho reporta a invasão da Reserva Florestal da Cidade Universitária "Armando de Salles Oliveira" (23º34' S e 46º43' W), um pequeno (10 ha) fragmento florestal, por uma palmeira nativa da Austrália, através da descrição dos padrões espaciais, estrutura de tamanhos e aspectos dinâmicos de sua população. Indivíduos adultos (DAP > 25 cm) se distribuem por grande parte da Reserva. Entre as árvores com DAP > ou = 9,5 cm, em uma área de 2,1 ha, A. cunninghamiana foi a espécie com maior densidade, com 305 indivíduos (22,5% do total). A espécie esteve ausente em locais com histórico recente de perturbação antrópica, sugerindo preferência por estabelecimento em locais sombreados. A análise da estrutura de tamanhos indica um aumento futuro da densidade relativa da espécie. Plântulas (com folhas pinatissectas, sem caule lignificado) não ocorreram em apenas três de 87 parcelas de 10 m x 10 m estudadas, e jovens (com caule lignificado) com DAP < 9,5 cm não ocorreram em 19 delas. Dois levantamentos com 2,5 anos de intervalo (DAP > ou = 9,5 cm) mostraram a morte de três dos 154 indivíduos iniciais e o recrutamento de mais 89, levando a um crescimento populacional de 19,4%.ano-1, muito elevado se comparado com dados da literatura. A grande densidade já alcançada pela invasora, assim como a tendência de aumento dessa densidade, pedem por ações de manejo que visem a reversão deste processo de invasão.

Reproductive biology of Protium spruceanum (Burseraceae), a dominant dioecious tree in vegetation corridors in Southeastern Brazil

We investigated the reproductive biology of Protium spruceanum (Benth.) Engler in vegetation corridors of secondary Atlantic forest in Lavras, southern Minas Gerais State, Brazil. The reproductive phenology was investigated fortnightly over a one year period. Floral biology studies involved pollen viability analysis, nectar production, stigmatic receptivity, pollen tube growth, visiting insect species and visit rates. The small, pale yellowish flowers (0.3-0.4 cm diameter) are functionally unisexual and organized in dense inflorescences (ca. 45 flowers). P. spruceanum presented annual flowering between September and November. Staminate flowers supplied a high percentage of viable pollen (90.6%) and relatively abundant nectar (x = 4.5 μL). Pistillate flowers produced only nectar to flower visitors (x = 4.0 μL). The effective pollinators were Apis mellifera and Trigona sp. (Hymenoptera, Apidae). Pollen tubes of cross-pollinated flowers were observed entering the ovaries 48 h after pollination. The fruiting season is from October to March, with a peak in November, coinciding with the rainfall peak. Ecological implications of these findings, and alternative arguments to explain the high genetic diversity at regional landscape are discussed.

Efectes de la invasió de la formiga argentina, Linepithema humile (Mayr), sobre el procés de dispersió de llavors de plantes mediterrànies

La formiga invasora Linepithema humile (Mayr), també coneguda com la formiga argentina, és una espècie present a la península Ibèrica. En aquesta tesi s'ha estudiat com afecta la presència d'aquesta espècie plaga a la comunitat de formigues autòctones y al procés de dispersió de llavors de plantes mediterrànies. L'estudi es va dur a terme en una àrea de sureda i brolla d'estepes i bruc boal situada al nord-est peninsular, prop de la línia de costa mediterrània. Un dels primers y més notables efectes de la invasió a les nostres àrees d'estudi és la dramàtica alteració de la comunitat de formigues, en forma de una reducció de la riquesa específica i de la homogeneïtat d'abundàncies. A més, a les zones envaïdes no hi queda cap espècie de formiga autòctona dispersant de llavors. A causa de la gran abundància d'obreres de la formiga argentina a les zones envaïdes, i del seu elevat ritme d'activitat, aquesta espècie efectua un intens rastreig del sòl, la qual cosa li permet localitzar els recursos en un temps menor que les formigues autòctones de les zones no envaïdes. No obstant, la obertura mandibular de la comunitat de formigues esdevé molt disminuïda a les zones envaïdes a causa de la desaparició de les espècies autòctones, la majoria d'elles de mida més grossa que la formiga argentina, la qual cosa podria limitar la capacitat de manipulació de l'entorn que té la comunitat de formigues a les zones envaïdes, i podria explicar la falta de reemplaçament d'alguns dels rols que duien a terme les espècies de formigues autòctones abans de la invasió. La formiga argentina es mostra atreta per les llavors de les nou espècies vegetals estudiades (dues euforbiàcies: Euphorbia biumbellata i E. characias; dues compostes: Cirsium vulgare i Galactites tomentosa; i cinc papilionàcies: Genista linifolia, G. monspessulana, G. triflora, Sarothamnus arboreus i Ulex parviflorus), arribant a transportar i fins i tot introduir al niu algunes llavors, però amb probabilitats inferiors a les realitzades per les formigues autòctones de les zones no envaïdes. No obstant, el seu comportament davant les nou espècies de llavors és variable, de manera que sembla que el seu efecte sobre la dispersió de llavors podria ser diferent per a cada espècie vegetal. L'alteració del procés de dispersió no sembla alterar l'èxit reproductiu d'una espècie concreta, Euphorbia characias, a les zones envaïdes; ni el seu reclutament, ni la distribució espacial, ni la supervivència de les plàntules són significativament diferents a les zones envaïdes que a les no envaïdes. La desaparició de les espècies de formigues granívores de les zones envaïdes pot afectar la dinàmica de les llavors de plantes no mirmecòcores. Així, les llavors de tres papilionàcies (Calicotome spinosa, Psoralea bituminosa i Spartium junceum) resulten amb un menor nivell de transports (i probablement menor depredació) a les zones envaïdes per la formiga argentina.

The utility of aerial pan-trapping for assessing insect pollinators across vertical strata

Insect pollinators provide a critical ecosystem service by pollinating many wild flowers and crops. It is therefore essential to be able to effectively survey and monitor pollinator communities across a range of habitats, and in particular, sample the often stratified parts of the habitats where insects are found. To date, a wide array of sampling methods have been used to collect insect pollinators, but no single method has been used effectively to sample across habitat types and throughout the spatial structure of habitats. Here we present a method of ‘aerial pan-trapping’ that allows insect pollinators to be sampled across the vertical strata from the canopy of forests to agro-ecosystems. We surveyed and compared the species richness and abundance of a wide range of insect pollinators in agricultural, secondary regenerating forest and primary forest habitats in Ghana to evaluate the usefulness of this approach. In addition to confirming the efficacy of the method at heights of up to 30 metres and the effects of trap color on catch, we found greatest insect abundance in agricultural land and higher bee abundance and species richness in undisturbed forest compared to secondary forest.

Passive Restoration in Biodiversity Hotspots: Consequences for an Atlantic Rainforest Lizard Taxocene

Long-term conservation in biodiversity hotspots depends on the recovery of communities in secondary forest fragments. In most cases, however, recovery strategies for these areas are based only on passive restoration. It is therefore necessary to determine the efficiency of such strategies. In this study, we assess the efficiency of passive restoration on a 567-ha 28-yr-old fragment of Atlantic Rainforest in Northeastern Brazil. We measured richness, composition, abundance and biomass of a lizard taxocene and also vegetation structure and availability of several microhabitat descriptors in 18 plots of this secondary forest. We then compared them with measures in 29 plots from two neighboring reference sites. Species richness, abundance, biomass and microhabitat descriptors availability inside the secondary fragment did not differ from reference sites. However, composition and vegetation structure showed small differences. Some forest specialist lizards, which should be a focus of conservation efforts in fragmented landscapes of the Atlantic Rainforest, were not found in the fragment and data indicate that this was not due to sampling or a lack of suitable habitat or microhabitat. In the presence of preserved source sites, passive restoration may be a cheap and effective way to recover lizard taxocenes of the Atlantic Rainforest. Some of the species may need to be re-introduced to accelerate the full recovery of original composition of lizard taxocenes in secondary Atlantic Rainforests.