Influence of phosphate ligands in abolishing the conformational difference between ribonuclease A and its acid-denatured derivative

The initial structural alteration of RNAase A due to acid denaturation (0.5 N HCl, 30 degrees C) that accompanies deamidation (without altering enzymic activity) has been dectected by spectrophotometric titration, fluorescence and ORD/CD measurements. It is shown that acid treated RNAase A has an altered conformation at neutral pH, 25 degrees C. This is characterized by the increased accessibility of buried tyrosine residue(s) towards the solvent. The most altered conformation of RNAase A is found in the 10 h acid-treated derivative. This has about 1.5 additional exposed tyrosine residues and a lesser amount of secondary structure than RNAase A. All three methods (titration, fluorescence and CD) established that the structural transition of RNAase A is biphasic. The first phase occurs within 1 h and the resulting subtle conformational change is constant up to 7 h. Following this, after the release of 0.55 mol of ammonia, the major conformational change begins. The altered conformation of the acid-denatured RNAase A could be reversed completely to the native state through a conformational change induced by substrate analogs like 2'- or 3'-CMP. Thus the monodeamidated derivative isolated from the acid-denatured RNAase A by phosphate is very similar to RNAase A in over-all conformation. The results suggest the possibility of flexibility in the RNAase A molecule that does not affect its catalytic activity, as probed through the tyrosine residues.

Enhanced reducibility of Ce1-xTixO2 compared to that of CeO2 and higher redox catalytic activity of Ce1-x-yTixPtyO2-delta compared to that of Ce1-xPtxO2-delta

Nanocrystalline Ce1-xTixO2 (0 <= x <= 0.4) and Ce1-xTixPtyO2-delta (x = 0.15, gamma = 0.01, 0.02) solid solutions crystallizing in fluorite structure have been prepared by a single step solution combustion method. Temperature programmed reduction and XPS study of Ce1-xTixO2 (x = 0.0-04) show complete reduction of Ti4+ to Ti3+ and reduction of similar to 20% Ce4+ to Ce3+ state compared to 8% Ce4+ to Ce3+ in the case of pure CeO2 below 675 degrees C. The substitution of Ti ions in CeO2 enhances the reducibility of CeO2. Ce0.84Ti0.15Pt0.01O2-delta crystallizes in fluorite structure and Pt is ionically substituted with 2+ and 4+ oxidation states. The H/Pt atomic ratio at 30 degrees C over Ce0.84Ti0.15Pt0.01O2-delta is 5 and that over Ce0.99Pt0.01O2-delta is 4 against just 0.078 for 8 nm Pt metal particles. Carbon monoxide and hydrocarbon oxidation activity are much higher over Ce1-x-yTixPtyO2 (x = 0.15, 0.01, 0.02) compared to Ce1-xPtxO2 (x = 0.01, 0.02). Synergistic involvement of Pt2+/Pt degrees and Ti4+/Ti3+ redox couples in addition to Ce4+/Ce3+ due to the overlap of Pt(5d), Ti(3d), and Ce(4f) bands near E-F is shown to be responsible for improved redox property and higher catalytic activity.

X-ray studies on crystalline complexes involving amino acids and peptides. XV. Crystal structures of L-lysine D-glutamate and L-lysine D-aspartate monohydrate and the effect of chirality on molecular aggregation

L-Lysine D-glutamate crystallizes in the monoclinic space group P2(1) with a = 4.902, b = 30.719, c = 9.679 A, beta = 90 degrees and Z = 4. The crystals of L-lysine D-aspartate monohydrate belong to the orthorhombic space group P2(1)2(1)2(1) with a = 5.458, b = 7.152, c = 36.022 A and Z = 4. The structures were solved by the direct methods and refined to R values of 0.125 and 0.040 respectively for 1412 and 1503 observed reflections. The glutamate complex is highly pseudosymmetric. The lysine molecules in it assume a conformation with the side chain staggered between the alpha-amino and the alpha-carboxylate groups. The interactions of the side chain amino groups of lysine in the two complexes are such that they form infinite sequences containing alternating amino and carboxylate groups. The molecular aggregation in the glutamate complex is very similar to that observed in L-arginine D-aspartate and L-arginine D-glutamate trihydrate, with the formation of double layers consisting of both types of molecules. In contrast to the situation in the other three LD complexes, the unlike molecules in L-lysine D-aspartate monohydrate aggregate into alternating layers as in the case of most LL complexes. The arrangement of molecules in the lysine layer is nearly the same as in L-lysine L-aspartate, with head-to-tail sequences as the central feature. The arrangement of aspartate ions in the layers containing them is, however, somewhat unusual. Thus the comparison between the LL and the LD complexes analyzed so far indicates that the reversal of chirality of one of the components in a complex leads to profound changes in molecular aggregation, but these changes could be of more than one type.

Microcycle conidiation and its genetic basis in Neurospora crassa

Some wild isolates of Neurospora show microcycle conidiation in liquid culture under continuous agitation. Macroconidia from agar-grown mycelial cultures germinated in liquid and the germlings spontaneously produced conidia with no intervening mycelial phase. Three types of microcycle conidiation were seen among progeny of N. crassa Vickramam A x N. crassa a wild-type: (1) multinucleate blastoconidia produced by apical budding and septation, (2) multinucleate arthroconidia produced by holothallic septation and disarticulation of cells, and (3) uninucleate microconidia produced directly from conidiogenous cells of the germlings. Two genes were identified which control specific patterns of microcycle conidiogenesis. A single gene mcb in linkage group VR near al-3 (3.2% recombination) controls blastoconidiation. This gene is epistatic to gene mcm located in linkage group IIL, very near ro-7 (1.4%). mcm controls both microconidiation and arthroconidiation depending on temperature. Strains of genotype mcm produce microconidia almost exclusively at 18-22 degrees C, but arthroconidia with few or no microconidia at 30 degrees C. Because they result in rapid and synchronized conidiation in liquid culture, the two genes should be useful for studies of developmental gene regulation. mcm makes it possible to obtain large quantities of pure microconidia rapidly for experimentation.

Dielectric relaxation in bismuth layer-structured BaBi4Ti4O15 ferroelectric ceramics

The dielectric properties of BaBi4Ti4O15 ceramics were investigated as a function of frequency (10(2)-10(6) Hz) at various temperatures (30 degrees C-470 degrees C), covering the phase transition temperature. Two different conduction mechanisms were obtained by fitting the complex impedance data to Cole-Cole equation. The grain and grain boundary resistivities were found to follow the Arrhenius law associated with activation energies: E-g similar to 1.12 eV below T-m and E-g similar to 0.70 eV above T-m for the grain conduction; and E-gb similar to 0.93 eV below T-m and E-gb similar to 0.71 eV above T-m for the grain boundary conduction. Relaxation times extracted using imaginary part of complex impedance Z `'(omega) and modulus M `'(omega) were also found to follow the Arrhenius law and showed an anomaly around the phase transition temperature. The frequency dependence of conductivity was interpreted in terms of the jump relaxation model and was fitted to the double power law. (C) 2010 Elsevier B. V. All rights reserved.

Sään ääri-ilmiöt luonnollista vaihtelua kuvaavassa 1200-vuotisessa ilmastokokeessa

Tämän tutkielman tavoitteena oli selvittää erimittaisten sään ääri-ilmiöiden jaksojen (lämpötila ja sademäärä) ja sään ääri-ilmiöiden yhdistelmien esiintymistä sekä todennäköisyyttä Suomessa nykyisessä ilmastossa havaintojen (1950-2009) ja ilmaston sisäistä luonnollista vaihtelua kuvaavan ilmastomallikokeen, ns. Millennium0001-kontrolliajon (1200 vuotta) tulosten pohjalta. Tutkielmassa tarkastellaan sään ääri-ilmiöiden yhdistelmien esiintyvyyttä myös kirjallisuuden ja synoptisten tarkastelujen avulla sekä arvioidaan niiden esiintymisten mahdollisia muutoksia ilmaston lämmetessä. Aluksi tutkittiin, miten malliaineisto ja havainnot poikkeavat toisistaan tilastollisesti lämpötilojen ja sademäärien osalta, minkä jälkeen kontrolliajon tuottamia suureita korjattiin havaittua keskimääräistä ilmastoa vastaaviksi. Keskeiset tulokset johdettiin erimittaisille äärimmäisen kylmille tai kuumille jaksoille ja äärimmäisen sateisille jaksoille. Tutkitut kuukaudet olivat tammi- ja heinäkuu. Esimerkiksi vuorokauden keskilämpötila 25,5 °C ylittyy heinäkuussa keskimäärin suuren osan Etelä- ja Keski-Suomea peittävän hilaruudun (300 km x 300 km) alueella 0,2 %:n todennäköisyydellä, sademäärä 29,7 mm samoin 0,2 %:n todennäköisyydellä. Tammikuussa samassa hilapisteessä seitsemän vuorokauden kylmin jakso -30,2 °C ja sateisin jakso 50,1 mm toistuu kerran n. 500 vuodessa. Kuukauden keskilämpötiloille ja sademäärille tehtiin korrelaatioanalyysejä, joiden perusteella saatiin selville, että Suomessa vähäsateinen loppukevät (huhti-kesäkuu) tai pelkkä kesäkuu edesauttavat keskimääräistä lämpimämmän heinäkuun esiintymistä. Selityksenä voidaan pitää maaperän pientä kosteussisältöä. Korrelaatiot kesäkuun sademäärän ja heinäkuun keski- lämpötilojen välillä vaihtelivat -0,26 ja -0,36 välillä tilastollisen merkitsevyystason ollessa yli 99,9 %. Ilmastonmuutos muuttaa sään ääri-ilmiöiden esiintyvyyttä ja voi mahdollisesti lisätä sään ääri-ilmiöiden yhdistelmien todennäköisyyttä tai yhteiskunnan ja luonnon haavoittuvuutta ääri-ilmiöille tai niiden yhdistelmille. Ääri-ilmiöt voivat aiheuttaa mittavia vahinkoja niin yhteiskunnalle kuin luonnollekin, joten tällaisiin tapahtumiin olisi tärkeää voida varautua etukäteen mahdollisten tuhojen minimoimiseksi. Olisikin tärkeää lisätä tutkimusta tästä aiheesta.

Vesicle formation from dimeric ion-paired amphiphiles. Control over vesicular thermotropic and ion-transport properties as a function of intra-amphiphilic headgroup separation

A novel series of vesicle-forming ion-paired amphiphiles, bis(hexadecyldimethylammonium)alkane dipalmitate (1a-1h), containing four chains were synthesized with two isolated headgroups. In each of these amphiphiles, the two headgroup charges are separated by a flexible polymethylene spacer chain -[(CH2)(m)]- of varying lengths (m) such that the length and the conformation of the spacer chain determine the intra-"monomer" headgroup separation. Transmission electron microscopy indicated that each of these forms bilayer membranes upon dispersion in aqueous media. The vesicular properties of these aggregates have been examined by differential scanning calorimetry and temperature-dependent fluorescence anisotropy measurements. Interestingly, their T-m values decreased with the increase in the m value. Thus while the apparent T-m of the lipid with m = 2 (1a) is 74.1 degrees C, the corresponding value observed for the lipid with m = 12 (1h) is 38.9 degrees C. The fluorescence anisotropy values (r) for 1b-1g were quite high (r similar to 0.3) compared to that of 1h (r similar to 0.23) at 20-30 degrees C in their gel states. On the other hand, the r value for vesicular 1b beyond melting was higher (0.1) compared to any of those for 1c-1h (similar to 0.04-0.06). X-ray diffraction of the cast films was performed to understand the nature and the thickness of these membrane organizations. The membrane widths ranged from 30 to 51 A as the m values varied. The entrapment of a small water-soluble solute, riboflavin, by the individual vesicular aggregates, and their sustenance: under an imposed transmembrane pH gradient have also been examined. These results show that all lipid vesicles entrap riboflavin and that generally the resistance to OH- permeation decreases with the increase in m value. Finally,all the above observations were comparatively analyzed, and on the basis of the calculated structures of these lipids, it was possible to conclude that membrane propel-ties can be modulated by spacer chain length variation of the ion-paired amphiphiles.

Two-Dimensional Correlation Analysis of Temperature-Dependent FT-IR Spectra of Oleic Acid

In the present study, variable temperature FT-IR spectroscopic investigations were used to characterize the spectral changes in oleic acid during heating oleic acid in the temperature range from -30 degrees;C to 22 degrees C. In order to extract more information about the spectral variations taking place during the phase transition process, 2D correlation spectroscopy (2DCOS) was employed for the stretching (C?O) and rocking (CH2) band of oleic acid. However, the interpretation of these spectral variations in the FT-IR spectra is not straightforward, because the absorption bands are heavily overlapped and change due to two processes: recrystallization of the ?-phase and melting of the oleic acid. Furthermore, the solid phase transition from the ?- to the a-phase was also observed between -4 degrees C and -2 degrees C. Thus, for a more detailed 2DCOS analysis, we have split up the spectral data set in the subsets recorded between -30 degrees C to -16 degrees C, -16 degrees C to 10 degrees C, and 10 degrees C to 22 degrees C. In the corresponding synchronous and asynchronous 2D correlation plots, absorption bands that are characteristic of the crystalline and amorphous regions of oleic acid were separated.

Deposition and characterization of pure and Cd doped SnO2 thin films by the nebulizer spray pyrolysis (NSP) technique

Pure and cadmium doped tin oxide thin films were deposited on glass substrates from aqueous solution of cadmium acetate, tin (IV) chloride and sodium hydroxide by the nebulizer spray pyrolysis (NSP) technique. X-ray diffraction reveals that all films have tetragonal crystalline structure with preferential orientation along (200) plane. On application of the Scherrer formula, it is found that the maximum size of grains is 67 nm. Scanning electron microscopy shows that the grains are of rod and spherical in shape. Energy dispersive X-ray analysis reveals the average ratio of the atomic percentage of pure and Cd doped SnO2 films. The electrical resistivity is found to be 10(2) Omega cm at higher temperature (170 degrees C) and 10(3) Omega cm at lower temperature (30 degrees C). Optical band gap energy was determined from transmittance and absorbance data obtained from UV-vis spectra. Optical studies reveal that the band gap energy decreases from 3.90 eV to 3.52 eV due to the addition of Cd as dopant with different concentrations.

Biodegradation of acrylamide and purification of acrylamidase from newly isolated bacterium Moraxella osloensis MSU11

The increasing industrial utilization of polyacrylamide to assist water clarification, sludge conditioning, papermaking, and secondary oil recovery leads to environmental pollution. In this work, an acrylamide degrading bacterium was isolated from paper mill effluent at Charan mahadevi, Tamilnadu, India. The minimal medium containing acrylamide (40 mM) served as a sole source of carbon and nitrogen for acrylamide degrading bacteria. The bacterial strain has grown well in 40 mM acrylamide at pH (6-7) at 30 degrees C. Within 24-48 h acrylamide was converted into acrylic acid and other metabolites. Based on biochemical characteristics and 16S rRNA gene sequence, the bacterial strain was identified as Gram negative, diplobacilli Moraxella osloensis MSU11. The acrylamide hydrolyzing bacterial enzyme acrylamidase was purified by HPLC. The enzyme molecular weight was determined to be approximately 38 kDa by SDS-PAGE using reference enzyme Pectinase. These results show that M. osloensis MSU11 has a potential to degrade the acrylamide present in the environment. (C) 2013 Elsevier Ltd. All rights reserved.

Improved capacity and stability of integrated Li and Mn rich layered-spinel Li1.17Ni0.25Mn1.08O3 cathodes for Li-ion batteries

A Li-rich layered-spinel material with a target composition Li1.17Ni0.25Mn1.08O3 (xLiLi1/3Mn2/3]O-2.(1 - x) LiNi0.5Mn1.5O4, (x = 0.5)) was synthesized by a self-combustion reaction (SCR), characterized by XRD, SEM, TEM, Raman spectroscopy and was studied as a cathode material for Li-ion batteries. The Rietveld refinement results indicated the presence of monoclinic (LiLi1/3Mn2/3]O-2) (52%), spinel (LiNi0.5Mn1.5O4) (39%) and rhombohedral LiNiO2 (9%). The electrochemical performance of this Li-rich integrated cathode material was tested at 30 degrees C and compared to that of high voltage LiNi0.5Mn1.5O4 spinel cathodes. Interestingly, the layered-spinel integrated cathode material exhibits a high specific capacity of about 200 mA h g(-1) at C/10 rate as compared to 180 mA h g(-1) for LiNi0.5Mn1.5O4 in the potential range of 2.4-4.9 V vs. Li anodes in half cells. The layered-spinel integrated cathodes exhibited 92% capacity retention as compared to 82% for LiNi0.5Mn1.5O4 spinel after 80 cycles at 30 degrees C. Also, the integrated cathode material can exhibit 105 mA h g(-1) at 2 C rate as compared to 78 mA h g(-1) for LiNi0.5Mn1.5O4. Thus, the presence of the monoclinic phase in the composite structure helps to stabilize the spinel structure when high specific capacity is required and the electrodes have to work within a wide potential window. Consequently, the Li1.17Ni0.25Mn1.08O3 composite material described herein can be considered as a promising cathode material for Li ion batteries.

DLTS analysis of amphoteric interface defects in high-TiO2 MOS structures prepared by sol-gel spin-coating

High-kappa TiO2 thin films have been fabricated from a facile, combined sol-gel spin - coating technique on p and n type silicon substrate. XRD and Raman studies headed the existence of anatase phase of TiO2 with a small grain size of 18 nm. The refractive index `n' quantified from ellipsometry is 2.41. AFM studies suggest a high quality, pore free films with a fairly small surface roughness of 6 angstrom. The presence of Ti in its tetravalent state is confirmed by XPS analysis. The defect parameters observed at the interface of Si/TiO2 were studied by capacitance - voltage (C - V) and deep level transient spectroscopy (DLTS). The flat - band voltage (V-FB) and the density of slow interface states estimated are -0.9, -0.44 V and 5.24x10(10), 1.03x10(11) cm(-2); for the NMOS and PMOS capacitors, respectively. The activation energies, interface state densities and capture cross -sections measured by DLTS are E-V + 0.30, E-C - 0.21 eV; 8.73x10(11), 6.41x10(11) eV(-1) cm(-2) and 5.8x10(-23), 8.11x10(-23) cm(2) for the NMOS and PMOS structures, respectively. A low value of interface state density in both P-and N-MOS structures makes it a suitable alternate dielectric layer for CMOS applications. And also very low value of capture cross section for both the carriers due to the amphoteric nature of defect indicates that the traps are not aggressive recombination centers and possibly can not contribute to the device operation to a large extent. (C) 2015 Author(s).

High Temperature XRD of Cu2GeSe3

The Cu2GeSe3 is prepared by solid state synthesis method. The high temperature XRD has been done at different temperature from 30 degrees C to 450 degrees C. The reitveld refinement confirms Cu2GeSe3 phase and orthorhombic crystal structure. The lattice constants are increasing with increase in the temperature and their rate of increase with respect to temperature are used for finding the thermal expansion coefficient. The calculation of the linear and volume coefficient of thermal expansion is done from 30 degrees C to 400 degrees C. Decrease in the values of linear expansion coefficients with temperature are observed along a and c axis. Since thermal expansion coefficient is the consequence of the distortion of atoms in the lattice; this can be further used to find the minimum lattice thermal conductivity at given temperature.

Influencia de diferentes periodos de destete en conejas primiparas en el municipio de Diriamba, Departamento de Carazo, Nicaragua

Este trabajo fue realizado en la Quinta "Myriam", ubicada en el municipio de Diriamba, departamento de Carazo, Nicaragua, propiedad del Dr. Jorge Ferreira. La ubicación geográfica del municipio está comprendida entre los 11° 50' y 12° 00' de Latitud Norte y entre los 86° 00' y 86° 15' de Longitud Oeste, cuenta con una elevación de 551 m.s.n.m., los datos meteorológicos de la zona en los últimos cuatro años (90-93) en cuanto a temperatura, humedad relativa y precipitación promedio fueron: 23.8 °C, 84% y 1184,5 mm respectivamente, (INETER, Departamento de Estadística, 1993). En el presente ensayo, se utilizó un diseño estadístico completamente aleatorizado (DCA), mediante el cual se evaluó el efecto de 3 tratamientos (15, 30 y 45 días de destete) sobre las variables Peso de la Camada al Destete (PCD), Peso de la Madre al Destete (PMD), Peso de la Madre al Segundo Parto (PSP), Ganancia Media Diaria del Parto 1 al Parto 2 (GMDp 1.P2) , con 4 repeticiones por tratamiento, éstas repeticiones estuvieron constituidas por conejas primíparas, las cuales tuvieron un peso que osciló entre 3 - 3.18 kg. y edad homogénea de 7 meses. Las variables fueron sometidas a la prueba de Duncan para determinar la superioridad en rango por tratamiento. Mediante el análisis de varianza se encontró que el efecto de los tratamientos resultó ser altamente significativo sobre la variable Peso de la Camada al Destete (PCD) (P0.01), significativo sobre las variables Peso de la Madre al Segundo Parto (PSP) y Ganancia Media Diaria del Parto 1 al Parto 2 (GMD p 1.P2) (P0.1) y no significativo sobre la variable Peso de la Madre al Destete (PMD) (NS). El efecto de la covariable Peso al Primer Parto (P1P) resultó ser altamente significativo sobre las variables Peso de la Madre al Destete (PMD) y Peso de la Madre al Segundo Parto (PSP) (P0.01). Después de someter las variables a la prueba de DUNCAN se encontraron los siguientes promedios por tratamiento: Peso de la Camada al Destete (PCD) ; T.15 días 1.538 kg P.V.(C), T.30 días 3.360 kg P.V. (B), T.45 días 4.523 kg P.V. (A), Peso de la Madre al Destete (PMD); T.15 días 3.649 kg P.V. (A) T.30 días 3.549 kg P.V. (A), T.45 dias 3.493 kg P.V.(A). Peso de la Madre al Segundo Parto (PSP); T.15 días 3. 449 kg P.V. (B), T.30 días 3.628 kg P.V. (AB), T.45 días 3.777 kg P.V.(A). Ganancia Media Diaria del Parto 1 al Parto 2 (GMD p 1.P2) T .15 días (2.071 g (B), T.30 días 2.718 g (AB), T.45 días 2. 975 g (A). Los promedios y desviaciones standard para las variables Ganancia Media Diaria del Parto 1 al Destete 1 (GMDp1-D1)y Ganancia Media Diaria del Destete l al Parto 2 (GMDD1.P2) por tratamiento fueron: GMD P1-D1; T.l5 días 3.84 g ± 0.50 g, T.30 días 2.54 g ± 0.64 g, T.45 días 2.37 g ± 0.72 g. GMD D1-P2; T.l5 días 2.26 g ± 0.54 g, T.30 días 3.17 g ± 0.74 g, T.45 días 3.93 g ± 0.28 g. Se encontró que el alimento tipo único suministrado a los animales bajo experimentación, cumplió con los requerimientos nutricionales de la especie estudiada. Los costos encontrados por hembra, por tratamiento, fueron C$ 197.21 destete de 15 días, C$ 220.28 destete de 30 días, C$ 243 .1.4 destete de 45 días. Los costos por gazapo destetado fueron de C$ 5.48 destete de 15 días, C$ 6.12 destete de 30 días, C$ 8.10 destete de 45 días.

Diagnóstico situacional de cuatro hemoparásitos en canes menores de un año, en cinco barrios del distrito VI-2 de Managua

Con el objetivo de conocer la presencia de agentes etiológicos causantes de las hemoparasitosis en canes, se realizó un estudio en cinco barrios del distrito VI- 2 de la ciudad de Managua , entre el 21 de Marzo al 01 de Abril del 2005, la localidad presentó una temperatura med ia 30.3 °C y una humedad relativa del 75% ± 5%. Se realizó un muestreo de 220 canes menores de un año, correspondiente al 20% del universo (1098 canes), en los cuales se les extrajo 2ml de sangre de la arteria radial y se realizaron dos frotis sanguíneos, mediante una punción del pabellón auricular (circulación periférica), ese mismo día, en el laboratorio, se obtuvo el hematocrito de la muestra de sangre y los frotis sanguíneos se tiñeron por el método de Giemsa, luego se observaron dos frotis sanguíneos por cada can muestreado, utilizando microscopía óptica de inmersi ón para identificar los hemoparásitos haciendo uso de parámetros morfológicos de clasificación taxonómica. Se encontraron 39 (17.7 %) canes hemoparasitados y una prevalencia para Haemobartonella canis de 2.5%, Babesia canis con 0.77 % y Ehrlichia canis con 0.19%; mientras, que en Hepatozoon canis no se encontró ningún caso positivo. Además se presento una asociación hemoparasitaria (Babesia-Haemobartonella) con una prevalencia de 0.29 %.