HCN channels enhance spike phase coherence and regulate the phase of spikes and LFPs in the theta-frequency range

What are the implications for the existence of subthreshold ion channels, their localization profiles, and plasticity on local field potentials (LFPs)? Here, we assessed the role of hyperpolarization-activated cyclic-nucleotide-gated (HCN) channels in altering hippocampal theta-frequency LFPs and the associated spike phase. We presented spatiotemporally randomized, balanced theta-modulated excitatory and inhibitory inputs to somatically aligned, morphologically realistic pyramidal neuron models spread across a cylindrical neuropil. We computed LFPs from seven electrode sites and found that the insertion of an experimentally constrained HCN-conductance gradient into these neurons introduced a location- dependent lead in the LFP phase without significantly altering its amplitude. Further, neurons fired action potentials at a specific theta phase of the LFP, and the insertion of HCN channels introduced large lags in this spike phase and a striking enhancement in neuronal spike-phase coherence. Importantly, graded changes in either HCN conductance or its half-maximal activation voltage resulted in graded changes in LFP and spike phases. Our conclusions on the impact of HCN channels on LFPs and spike phase were invariant to changes in neuropil size, to morphological heterogeneity, to excitatory or inhibitory synaptic scaling, and to shifts in the onset phase of inhibitory inputs. Finally, we selectively abolished the inductive lead in the impedance phase introduced by HCN channels without altering neuronal excitability and found that this inductive phase lead contributed significantly to changes in LFP and spike phase. Our results uncover specific roles for HCN channels and their plasticity in phase-coding schemas and in the formation and dynamic reconfiguration of neuronal cell assemblies.

Automated, objective texture segmentation of multibeam echosounder data - Seafloor survey and substrate maps from James Island to Ozette Lake, Washington Outer Coast

Without knowledge of basic seafloor characteristics, the ability to address any number of critical marine and/or coastal management issues is diminished. For example, management and conservation of essential fish habitat (EFH), a requirement mandated by federally guided fishery management plans (FMPs), requires among other things a description of habitats for federally managed species. Although the list of attributes important to habitat are numerous, the ability to efficiently and effectively describe many, and especially at the scales required, does not exist with the tools currently available. However, several characteristics of seafloor morphology are readily obtainable at multiple scales and can serve as useful descriptors of habitat. Recent advancements in acoustic technology, such as multibeam echosounding (MBES), can provide remote indication of surficial sediment properties such as texture, hardness, or roughness, and further permit highly detailed renderings of seafloor morphology. With acoustic-based surveys providing a relatively efficient method for data acquisition, there exists a need for efficient and reproducible automated segmentation routines to process the data. Using MBES data collected by the Olympic Coast National Marine Sanctuary (OCNMS), and through a contracted seafloor survey, we expanded on the techniques of Cutter et al. (2003) to describe an objective repeatable process that uses parameterized local Fourier histogram (LFH) texture features to automate segmentation of surficial sediments from acoustic imagery using a maximum likelihood decision rule. Sonar signatures and classification performance were evaluated using video imagery obtained from a towed camera sled. Segmented raster images were converted to polygon features and attributed using a hierarchical deep-water marine benthic classification scheme (Greene et al. 1999) for use in a geographical information system (GIS). (PDF contains 41 pages.)

Let sleeping doggerel lie?: James Joyce's "The Death of Parnell" and the challenges of addressing 'bad' verse in translation

Eterio Pajares, Raquel Merino y José Miguel Santamaría (eds.)

Analysis of temporal structure in spike trains of visual cortical area MT

The temporal structure of neuronal spike trains in the visual cortex can provide detailed information about the stimulus and about the neuronal implementation of visual processing. Spike trains recorded from the macaque motion area MT in previous studies (Newsome et al., 1989a; Britten et al., 1992; Zohary et al., 1994) are analyzed here in the context of the dynamic random dot stimulus which was used to evoke them. If the stimulus is incoherent, the spike trains can be highly modulated and precisely locked in time to the stimulus. In contrast, the coherent motion stimulus creates little or no temporal modulation and allows us to study patterns in the spike train that may be intrinsic to the cortical circuitry in area MT. Long gaps in the spike train evoked by the preferred direction motion stimulus are found, and they appear to be symmetrical to bursts in the response to the anti-preferred direction of motion. A novel cross-correlation technique is used to establish that the gaps are correlated between pairs of neurons. Temporal modulation is also found in psychophysical experiments using a modified stimulus. A model is made that can account for the temporal modulation in terms of the computational theory of biological image motion processing. A frequency domain analysis of the stimulus reveals that it contains a repeated power spectrum that may account for psychophysical and electrophysiological observations.

Some neurons tend to fire bursts of action potentials while others avoid burst firing. Using numerical and analytical models of spike trains as Poisson processes with the addition of refractory periods and bursting, we are able to account for peaks in the power spectrum near 40 Hz without assuming the existence of an underlying oscillatory signal. A preliminary examination of the local field potential reveals that stimulus-locked oscillation appears briefly at the beginning of the trial.

James Clerk Maxwell e a unidade do mundo: modelos e metáforas na construção de teorias científicas

Esta é uma pesquisa sobre o uso de metáforas na construção de modelos por parte do físico escocês James Clerk Maxwell. O objetivo da pesquisa foi buscar compreender de que maneira o uso de metáforas e modelos é legítimo na ciência e em que medida contribui para seu sucesso. Além disso, busca compreender em que medida o uso de artifícios como modelos e analogias entre ramos distintos da ciência são impulsionadores de sucesso explicativo e preditivo da teoria do físico estudado. Explora as crenças teológicas e filosóficas do autor, que vê o mundo como unidade, permitindo a analogia entre ramos distintos da física. Seus desenvolvimentos em torno de teorias como calor, cores, óptica, magnetismo e eletricidade permitem evidenciar essa visão em todo o seu trabalho. Maxwell é considerado inaugurador de nova metodologia com o uso de modelos e metáforas. Explora o desenvolvimento da teoria das cores, da descrição matemática da estabilidade dos anéis de Saturno e o desenvolvimento da teoria dos gases como preâmbulo à discussão da teoria do eletromagnetismo. Descreve o desenvolvimento teórico do eletromagnetismo em seus diversos momentos. A construção da teoria do eletromagnetismo evidencia paulatino abandono do mecanicismo, uso intenso de modelos e metáforas temporários e ênfase na quantificação e no uso de experimentos. Discute o relacionamento de Maxwell com as discussões filosóficas, sociais e teológicas de sua época, seu engajamento em atividades práticas nesse sentido e suas influências científicas e filosóficas. Descreve e discute os textos filosóficos do cientista, em que se evidenciam sua ontologia, suas crenças teológicas e sua concepção de analogias. Discute a questão do uso de analogias em ciência e compara diversos autores que abordam o tema. A metodologia utilizada foi a de levantamento bibliográfico com análise crítica da literatura do autor e de seus comentadores, além de comentário crítico sobre os textos primários e secundários. Conclui que o sucesso científico de Maxwell deve-se à sua aposta numa unidade do mundo garantida por Deus, bem como na unidade entre o mundo e a mente humana, posturas que mostraram ser bem-sucedidas quando aplicadas à metodologia científica. Conclui também pela legitimidade e necessidade do uso de metáforas e modelos no empreendimento científico.

Exílios caminhantes: imbricações entre autorrepresentação e a narrativa de cidades nas literaturas de James Joyce e Suketu Mehta

A presente investigação propõe uma comparação entre a obra do romancista irlandês James Joyce produzida até 1904 e a obra Bombaim: cidade máxima, do escritor indiano Suketu Mehta no sentido de identificar semelhanças em certos procedimentos de representação tanto da cidade como da autorrepresentação, ou seja, a representação de si mesmo. É objetivo da investigação aqui desenvolvida também argumentar que tais semelhanças não são meramente fortuitas, mas que estão relacionadas à continuidade de processos históricos diretamente relacionados ao advento, propagação e manutenção do que a historiadora estadunidense Ellen Meiksins Wood chama de império do capital. Para levar a investigação a cabo, foi promovida uma pesquisa formada pelos seguintes desmembramentos que compõem os capítulos da tese: uma revisão dos conceitos de colônia, império e imperialismo, assim como da relação entre o Império Britânico e a Irlanda a primeira colônia britânica e terra natal de Joyce e a Índia a maior e mais importante colônia britânica e país onde Mehta nasceu; uma exploração do tema da cidade, que envolve sua relevância para a contemporaneidade, a emergência da cidade industrial capitalista, e as ideias do sociólogo alemão Georg Simmel acerca da configuração psicológica engendrada na e por essa conformação urbana; uma detida investigação da obra inicial de Joyce, no intuito de explorar o desenvolvimento do que chamamos de literatura dramática joyceana, seu uso nos primeiros textos ficcionais de Joyce e a relação de tal literatura com o tema da cidade; uma breve recapitulação de alguns dos eventos marcantes do século XX que acreditamos terem estreita relação com a pesquisa aqui desenvolvida: a derrocada do Império Britânico, a emergência dos EUA como nova potência imperial, a relação do movimento Modernista com o contexto imperialista do início do século e com o tema da cidade, ilustrada principalmente pela figura e obra de Joyce; uma detalhada exploração de Bombaim: cidade máxima, seus personagens e temas; finalmente, a explicitação das semelhanças e diferenças existentes entre as narrativas de Joyce e Mehta e de como tais características se relacionam com a emergência, manutenção e propagação do império do capital.

James's rule and causes and consequences of a latitudinal cline in the demography of John's Snapper (Lutjanus johnii) in coastal waters of Australia

Demographic parameters were derived from sectioned otoliths of John’s Snapper (Lutjanus johnii) from 4 regions across 9° of latitude and 23° of longitude in northern Australia. Latitudinal variation in size and growth rates of this species greatly exceeded longitudinal variation. Populations of John’s Snapper farthest from the equator had the largest body sizes, in line with James’s rule, and the fastest growth rates, contrary to the temperature-size rule for ectotherms. A maximum age of 28.6 years, nearly 3 times previous estimates, was recorded and the largest individual was 990 mm in fork length. Females grew to a larger mean asymptotic fork length (L∞) than did males, a finding consistent with functional gonochorism. Otolith weight at age and gonad weight at length followed the same latitudinal trends seen in length at age. Length at maturity was ~72–87% of L∞ and varied by ~23% across the full latitudinal gradient, but age at first maturity was consistently in the range of 6–10 years, indicating that basic growth trajectories were similar across vastly different environments. We discuss both the need for complementary reproductive data in age-based studies and the insights gained from experiments where the concept of oxygen- and capacity-limited thermal tolerance is applied to explain the mechanistic causes of James’s rule in tropical fish species.

Food habits of Sowerby's beaked whales (Mesoplodon bidens) taken in the pelagic drift gillnet fishery of the western North Atlantic

We describe the food habits of the Sowerby’s beaked whale (Mesoplodon bidens) from observations of 10 individuals taken as bycatch in the pelagic drift gillnet fishery for Swordfish (Xiphias gladius) in the western North Atlantic and 1 stranded individual from Kennebunk, Maine. The stomachs of 8 bycaught whales were intact and contained prey. The diet of these 8 whales was dominated by meso- and benthopelagic fishes that composed 98.5% of the prey items found in their stomachs and cephalopods that accounted for only 1.5% of the number of prey. Otoliths and jaws representing at least 31 fish taxa from 15 families were present in the stomach contents. Fishes, primarily from the families Moridae (37.9% of prey), Myctophidae (22.9%), Macrouridae (11.2%), and Phycidae (7.2%), were present in all 8 stomachs. Most prey were from 5 fish taxa: Shortbeard Codling (Laemonema barbatulum) accounted for 35.3% of otoliths, Cocco’s Lanternfish (Lobianchia gemellarii) contributed 12.9%, Marlin-spike (Nezumia bairdii) composed 10.8%, lanternfishes (Lampanyctus spp.) accounted for 8.4%; and Longfin Hake (Phycis chesteri) contributed 6.7%. The mean number of otoliths per stomach was 1196 (range: 327–3452). Most of the fish prey found in the stomachs was quite small, ranging in length from 4.0 to 27.7 cm. We conclude that the Sowerby’s beaked whales that we examined in this study fed on large numbers of relatively small meso- and benthopelagic fishes that are abundant along the slope and shelf break of the western North Atlantic.