Systematic Screening of Plant Extracts from the Brazilian Pantanal with Antimicrobial Activity against Bacteria with Cariogenic Relevance

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Diferença entre as espécies de Timbó (Derris Spp., Fabaceae) de diferentes regiões da Amazônia no controle da Musca domestica L.

The roots' powder of timbo species collected in different regions of Amazonia that were tested in larvae groupings, didn't produce differential significative effects in two strains of Musca domestica. The two species with the greater number of plants used in the trial were Derris urucu and Derris nicou; the individuals from the species came from regions considered as "forestal refugies" during the Amazonian pleistocene. Among each species the plants varied since that inefficient to control, until plants lethals to the fies. This differential capacity for larvae control among plants of the same species, originated from different regions, suggests that both species had their populations isolated, during the quaternary epoch. In regions or "forestal refugies", where both species were represented, D. urucu was superior to D. nicou in the capacity to control larvae. While among plants from F region (Peruvian-East refuge) of the State of Acre, the two species had convergence in the values of damage to larvae groupings. Among the another species, Derris sp. (yellow timbo or watermelon timbo) didn't show differences in larvae control between samples from the two regions; while the species that was introduced in the Amazonia Denis elleptica showed damage in the larvae groupings similar to the most effective plants of D. nicou and D. urucu.

Fungal Planet description sheets: 320-370

Novel species of fungi described in the present study include the following from Malaysia: Castanediella eucalypti from Eucalyptus pellita, Codinaea acacia from Acacia mangium, Emarcea eucalyptigena from Eucalyptus brassiana, Myrtapenidiella eucalyptorum from Eucalyptus pellita, Pilidiella eucalyptigena from Eucalyptus brassiana and Strelitziana malaysiana from Acacia mangium. Furthermore, Stachybotrys sansevieriicola is described from Sansevieria ehrenbergii (Tanzania), Phacidium grevilleae from Grevillea robusta (Uganda), Graphium jumulu from Adansonia gregorii and Ophiostoma eucalyptigena from Eucalyptus marginata (Australia), Pleurophoma ossicola from bone and Plectosphaerella populi from Populus nigra (Germany), Colletotrichum neosansevieriae from Sansevieria trifasciata, Elsinoë othonnae from Othonna quinquedentata and Zeloasperisporium cliviae (Zeloasperisporiaceae fam. nov.) from Clivia sp. (South Africa), Neodevriesia pakbiae, Phaeophleospora hymenocallidis and Phaeophleospora hymenocallidicola on leaves of a fern (Thailand), Melanconium elaeidicola from Elaeis guineensis (Indonesia), Hormonema viticola from Vitis vinifera (Canary Islands), Chlorophyllum pseudoglobossum from a grassland (India), Triadelphia disseminata from an immunocompromised patient (Saudi Arabia), Colletotrichum abscissum from Citrus (Brazil), Polyschema sclerotigenum and Phialemonium limoniforme from human patients (USA), Cadophora vitícola from Vitis vinifera (Spain), Entoloma flavovelutinum and Bolbitius aurantiorugosus from soil (Vietnam), Rhizopogon granuloflavus from soil (Cape Verde Islands), Tulasnella eremophila from Euphorbia officinarum subsp. echinus (Morocco), Verrucostoma martinicensis from Danaea elliptica (French West Indies), Metschnikowia colchici from Colchicum autumnale (Bulgaria), Thelebolus microcarpus from soil (Argentina) and Ceratocystis adelpha from Theobroma cacao (Ecuador). Myrmecridium iridis (Myrmecridiales ord. nov., Myrmecridiaceae fam. nov.) is also described from Iris sp. (The Netherlands). Novel genera include (Ascomycetes): Budhanggurabania from Cynodon dactylon (Australia), Soloacrosporiella, Xenocamarosporium, Neostrelitziana and Castanediella from Acacia mangium and Sabahriopsis from Eucalyptus brassiana (Malaysia), Readerielliopsis from basidiomata of Fuscoporia wahlbergii (French Guyana), Neoplatysporoides from Aloe ferox (Tanzania), Wojnowiciella, Chrysofolia and Neoeriomycopsis from Eucalyptus (Colombia), Neophaeomoniella from Eucalyptus globulus (USA), Pseudophaeomoniella from Olea europaea (Italy), Paraphaeomoniella from Encephalartos altensteinii, Aequabiliella, Celerioriella and Minutiella from Prunus (South Africa). Tephrocybella (Basidiomycetes) represents a novel genus from wood (Italy). Morphological and culture characteristics along with ITS DNA barcodes are provided for all taxa.

Thermal plasticity of mitochondria: a latitudinal comparison between Southern Ocean molluscs

Mitochondrial volume density (Vv((mt,f))), cristae surface density (Sv((im,mt))), cristae surface area (Sv((im,f))) and citrate synthase (CS) activity were analysed as indicators of thermal acclimation in foot muscle of the limpet, Nacella concinna, and the clam, Laternula elliptica, collected from 4 locations within the Southern Ocean, South Georgia (54 degrees S, N. concinna only), Signy (60 degrees S), Jubany (L. elliptica only -62 degrees S) and Rothera (67 degrees S). Animals were acclimated to 0.0 degrees C whilst a sub-set of N. concinna (South Georgia, Signy and Rothera) and L. elliptica (Rothera) were acclimated to 3.0 degrees C. At 0.0 degrees C N. concinna had higher Vv((mt,f)), Sv((im,mt)), Sv((im,f)) and muscle fibre specific CS activity than L. elliptica which correlated with the more active life style of N. concinna. However, mitochondrial density was very low, 1-2% in both species, suggesting that low temperature compensation of mitochondrial density is not a universal evolutionary response of Antarctic marine ectotherms. Both Sv((im,mt)) and Sv((im,f)) were reduced by warm acclimation of N. concinna. South Georgia N. concinna maintained muscle fibre specific CS activity after acclimation, in contrast to N. concinna from Rothera and Signy and L. elliptica from Rothera, indicating that they have the physiological plasticity to respond to their warmer, more variable thermal environment.

(Table T1) Radiolaria abundance of ODP Hole 175-1082A

A primary objective of Leg 175 was to investigate the upwelling history of the Benguela Current. Upwelling along the coast is found over the shelf in several well-established cells, as well as along the shelf-slope break, and extends over the 1000-m isobath. Streaming filaments along the coast also carry upwelled water off shore (Shannon, 1985). The upwelled nutrient-rich waters are sourced from the South Atlantic central water mass, which is a mixture of subtropical and subantarctic water masses. Below the central water mass lies Antarctic intermediate water (Shannon and Hunter, 1988, doi:10.2989/025776188784480735; Stramma and Peterson, 1989, doi:10.1175/1520-0485(1989)019<1440:GTITBC>2.0.CO;2). The upwelling system supports a robust marine community (Shannon and Pillar, 1986) where radiolarians are abundant (Bishop et al., 1978, doi:10.1016/0146-6291(78)90010-3). The endemic nature of radiolarians makes them useful in reconstructing the paleocirculation patterns. The biogeographic distribution of many species is limited by water-mass distribution. In a given geographic region, species may also have discrete depth habitats. However, their depth of occurrence can change worldwide because the depths of water masses vary with latitude (Boltovskoy, 1999). Consequently, species found at shallow depths at high latitudes (cold-water fauna) are observed deeper in the water column at lower latitudes. The low-latitude submergence of cold-water species broadens their distribution, resulting in species distributions that can cover multiple geographic regions (Kling, 1976, doi:10.1016/0011-7471(76)90880-9; Casey, doi:10.1016/0031-0182(89)90017-5; 1971; Boltovskoy, 1987, doi:10.1016/0377-8398(87)90014-4). Since radiolarian distribution is closely related to water-mass distribution and controlled by climatic conditions rather than geographic regions, similar assemblages characterize the equatorial, subtropical, transition, subpolar, and polar regions of ocean basins (Petrushevskaya, 1971a; Casey, 1989, doi:10.1016/0031-0182(89)90017-5; Boltovskoy, 1999). Numerous radiolarian species found in water masses in the Angola and Benguela Current systems have also been observed in plankton net samples, sediment traps, and surface-sediment studies in the Atlantic sector of the Southern Ocean, where they exhibited particular water-mass affinities (Abelmann, 1992a, doi:10.1007/BF00243107; Abelmann 1992b, doi:10.1007/BF00243108; Abelmann and Gowing, 1997, doi:10.1016/S0377-8398(96)00021-7). This report presents data on the radiolarian fauna recovered from Site 1082 sediments in the form of a survey of species reflecting the latitudinal migration of the Angola-Benguela Front and upwelling. The data constitute a time series of relative radiolarian abundances at very high resolution (every 20 cm) of the upper 12 m of Hole 1082A.

Benthic fauna at station FINO 1, 2005-2007

In der Nordsee wurden auf der Forschungsplattform FINO 1 Felduntersuchungen durchgeführt, um spezielle Fragen zu möglichen Auswirkungen von Offshore-Windenergieparks auf die marine Umwelt zu beantworten. Der Fokus war dabei auf die Konsequenzen für die Lebensgemeinschaft am Meeresboden gerichtet. Es wurden die benthosökologischen Prozesse im Nahbereich der Piles sowie die mittelfristige Entwicklung der Aufwuchsfauna auf der künstlichen Unterwasserstruktur dokumentiert. Die Ansammlung pelagischer Fischen um die Plattform und der Export organischen Materials von der Plattform wurden quantifiziert. Die räumliche Ausdehnung und die Erheblichkeit von Auswirkungen auf die Lebensgemeinschaften des Meeresbodens wurden anhand mathematischer Modellierung abgeschätzt. Zusätzlich wurde die Anwendbarkeit der elektrochemischen Akretionstechnologie zur Schaffung naturnaher Kalksubstrate in der Nordsee getestet und geeignete Parameter für eine erfolgreiche Umsetzung unter Nordseebedingungen ermittelt. Die auch 4,5 Jahre nach Errichtung der Plattform noch ansteigende Artenzahl der Aufwuchsfauna lässt darauf schließen, dass der Sukzessionsprozess noch nicht abgeschlossen ist. Die stark vertikal zonierte Aufwuchsfauna auf der Unterwasserkonstruktion erreicht eine Masse von ca. 5 Tonnen mit ausgeprägten saisonalen Schwankungen. Anhand von echoakustischen Untersuchungen wurden saisonal auftretende Ansammlungen pelagischer Fische um die Plattform dokumentiert. Der Nahbereich der Plattform unterschied sich durch eine Schillauflage und eine räumlich und zeitlich sehr variable Sediment- und Bodenfaunazusammensetzung deutlich von einem Referenzgebiet in 200-400 m Abstand von der Plattform. Eine konzentrische Zonierung mit unterschiedlich stark ausgeprägten Veränderungen der Bodenfauna lässt auf komplexe Veränderung des gesamten lokalen Nahrungsgefüges im Nahbereich der Plattform schließen. Anhand einer Modellierung konnte der Materialexport in die umgebenden Weichbodenbereiche für einzelne Piles und einen hypothetischen Windpark abgeschätzt werden. Die lokale Ausbildung einer hohen Biomasse auf der Unterwasserkonstruktion von WEA sowie der Export mit anschließender Sedimentation lassen zumindest lokal einen erheblichen Einfluss auf Stoff- und Energieflüsse erwarten.

Silicoflagellates and ebridians from the New Jersey Transect DSDP Leg 93

Well-preserved and diverse silicoflagellate and ebridian populations are found in the lower and middle Eocene sediments of DSDP Site 605 and the upper Miocene sediments of DSDP Site 604. The ebridians outnumber the silicoflagellates in the siliceous interval of Site 605, but are less numerous at Site 604. The abundances of the various taxa are tabulated.

Abundance of mesozooplankton in the Cilician Basin during the Bilim 2 cruise in March 2008

The Sesame dataset contains mesozooplankton data collected during March 2008 in the Cilician Basin (between between 35.40'- 36.79 N latitude and 33.19- 36.07 E ). Mesozooplankton samples were collected by using a WP-2 closing net with 200 micron mesh size during day hours (07:00-18:00). Samples were taken in the 0-50, 50-100, 100-200 m layer at 6 stations in the Cilician Basin. The dataset includes samples analyzed for mesozooplankton species composition, abundance and total biomass (Dry weight(mg/m**3)). Taxon-specific mesozooplankton abundance: 1/2 sample or an aliquot was analyzed under the binocular microscope. Copepod species were identified and enumerated; the other mesozooplankters were identified and enumerated at higher taxonomic level (commonly named as mesozooplankton groups). Taxonomic identification was done at the METU-Institute of Marine Sciences by Tuba Terbiyik using the relevant taxonomic literatures. Mesozooplankton total abundance: 1/2 sample or an aliquot was analyzed under the binocular microscope. Copepod species were identified and enumerated; the other mesozooplankters were identified and enumerated at higher taxonomic level (commonly named as mesozooplankton groups). Taxonomic identification was done at the METU-Institute of Marine Sciences using the relevant taxonomic literatures

Mid-Pleistocene benthic foraminiferal record in the Southwest Pacific

Benthic foraminiferal faunas from three bathyal sequences provide a proxy record of oceanographic changes through the mid-Pleistocene transition (MPT) on either side of the Subtropical Front (STF), east of New Zealand. Canonical correspondence analyses show that factors related to water depth, latitude and climate cycles were more significant than oceanographic factors in determining changes in faunal assemblage composition over the last 1 Ma. Even so, mid-Pleistocene faunal changes are recognizable and can be linked to inferred palaeoceanographic causes. North of the largely stationary STF the faunas were less variable than to the south, perhaps reflecting the less extreme glacial-interglacial fluctuations in the overlying Subtropical Surface Water. Prior to Marine Isotope Stage (MIS) 21 and after MIS 15, the northern faunas had fairly constant composition, but during most of the MPT faunal composition fluctuated in response to climate-related food-supply variations. Faunal changes through the MPT suggest increasing food supply and decreasing dissolved bottom oxygen. South of the STF, beneath Subantarctic Surface Water, mid-Pleistocene faunas exhibited strong glacial-interglacial fluctuations, inferred to be due to higher interglacial nutrient supply and lower oxygen levels. The most dramatic faunal change in the south occurred at the end of the MPT (MIS 17- 12). with an acme of Abditodentrix pseudothalmanni, possibly reflecting higher carbon flux and lower bottom oxygen. This study suggests that the mid-Pleistocene decline and extinction of a group of elongate, cylindrical deep-sea foraminifera may have been related to decreased bottom oxygen concentrations as aresult of slower deep-water currents.