Model studies on the role of citrate, malate and pectin esterification on the enzymatic degradation of Al- and Ca-pectate gels: possible implications for Al-tolerance

Aluminium (At) tolerance in plants may be conferred by reduced binding of Al in the cell wall through low root cation exchange capacity (CEC) or by organic acid exudation. Root CEC is related to the degree of esterification (DE) of pectin in the cell wall, and pectin hydrolysis plays a role in cell expansion. Therefore, it was hypothesised that Al-tolerant plants with a low root CEC maintain pectin hydrolysis in the presence of Al, allowing cell expansion to continue. Irrespective of the DE, binding of Al to pectin reduced the enzymatic hydrolysis of Al-pectin gels by polygalacturonase (E.C. 3.2.1.15). Pectin gels with calcium (Ca) were slightly hydrolysed by polygalacturonase. It was concluded, therefore, that Al tolerance conferred by low root CEC is not mediated by the ability to maintain pectin hydrolysis. Citrate and malate, but not acetate, effectively dissolved Al-pectate gel and led to hydrolysis of the dissolved pectin by polygalacturonase. The organic acids did not dissolve Ca-pectate, nor did they increase pectin hydrolysis by polygalacturonase. It was concluded that exudation of some organic acids can remove Al bound to pectin and this could alleviate toxicity, constituting a tolerance mechanism. (C) 2003 Editions scientitiques et medicales Elsevier SAS. All rights reserved.

Acúmulo e liberação de P, K, Ca e Mg em crotalária e milheto solteiros e consorciados

As características das leguminosas e gramíneas usadas como plantas de cobertura são bastante conhecidas, mas a velocidade com que os nutrientes associados à biomassa vegetal tornam-se disponíveis às culturas é ainda pouco estudada. O objetivo deste trabalho foi determinar o acúmulo e a taxa de liberação de nutrientes de crotalária e milheto solteiros ou consorciados. O delineamento experimental adotado foi blocos ao acaso, com quatro repetições. Os tratamentos foram crotalária, milheto, crotalária + milheto e vegetação espontânea. O acúmulo de P e Mg foi influenciado pela produção de massa, com valores elevados na crotalária, enquanto o acúmulo de Ca resultou tanto do maior teor quanto da maior produção de massa nos tratamentos com a leguminosa. A liberação de nutrientes dos resíduos apresentou dinâmica semelhante, com duas fases distintas: a primeira com taxas mais elevadas nos primeiros 15 dias e a segunda mais lenta a partir dessa fase. As taxas de liberação de K, Ca e Mg foram semelhantes, independentemente dos tratamentos. Os resíduos da crotalária apresentaram maior liberação de P do que as da vegetação espontânea, com meia vida de 11 dias e a vegetação espontânea de 17 dias. O Ca foi liberado mais lentamente do que os demais nutrientes, e o Mg mais rapidamente. As plantas espontâneas e o milheto apresentam importante potencial na reciclagem de K, e a crotalária se destacou na reciclagem de Ca e Mg.

Rede de voluntariado criada nos EUA e CA

Na qualidade de Diretora Regional das Comunidades, fomos responsável pela redação dos artigos e coordenação da página "Comunidades", integrada no jornal Açoriano Oriental, servindo a mesma para a divulgação das atividades realizadas pela Direção Regional Das Comunidades do Governo dos Açores.

Arrow plot and CA maps on microarray preprocessing methods

Microarray allow to monitoring simultaneously thousands of genes, where the abundance of the transcripts under a same experimental condition at the same time can be quantified. Among various available array technologies, double channel cDNA microarray experiments have arisen in numerous technical protocols associated to genomic studies, which is the focus of this work. Microarray experiments involve many steps and each one can affect the quality of raw data. Background correction and normalization are preprocessing techniques to clean and correct the raw data when undesirable fluctuations arise from technical factors. Several recent studies showed that there is no preprocessing strategy that outperforms others in all circumstances and thus it seems difficult to provide general recommendations. In this work, it is proposed to use exploratory techniques to visualize the effects of preprocessing methods on statistical analysis of cancer two-channel microarray data sets, where the cancer types (classes) are known. For selecting differential expressed genes the arrow plot was used and the graph of profiles resultant from the correspondence analysis for visualizing the results. It was used 6 background methods and 6 normalization methods, performing 36 pre-processing methods and it was analyzed in a published cDNA microarray database (Liver) available at http://genome-www5.stanford.edu/ which microarrays were already classified by cancer type. All statistical analyses were performed using the R statistical software.

Flavoured versus natural waters: macromineral (Ca, Mg, K, Na) and micromineral (Fe, Cu, Zn) contents

Macro (Ca, Mg, K, Na) and micromineral (Fe, Zn, Cu) composition of 39 waters was analysed. Determinations were made by atomic flame spectrophotometry for macrominerals and electrothermic atomisation in graphite furnace for microminerals. Mineral contents of still or sparkling natural waters (without flavours) changed from brand to brand. Mann–Whitney test was used to search for significant differences between flavoured and natural waters. For that, the concentration of each mineral was compared to the presence of flavours, preservatives, acidifying agents, fruit juice and/or sweeteners, according to the labelled composition. The statistical study demonstrated that flavoured waters generally have increased contents of K, Na, Fe and Cu. The added preservatives also led to significant differences in the mineral composition. Acidifying agents and fruit juice can also be correlated to the increase of Mg, K, Na, Fe and Cu. Sweeteners do not provide any significant difference in Ca, Mg, Fe and Zn contents.

Notes sur la géologie et la paleontology du Miocène de Lisbonne; (XXII) une espèce nouvelle, Pokornyella lus/tan/ca (Ostracoda), dans le Miocène inférieur du bassin du Tage

A new species, Pokornyella lusitanica (Ostracoda), from the Lower Miocene (Aquitanian) of the Lisbon area, is described. Some palaeoecological data are presented.

Estudo da influência do material inorgânico na formação de H2S e HCl durante a co-gasificação de CDR com carvão

O objectivo principal deste trabalho relaciona-se com a compreensão dos mecanismos de formação de H2S e HCl durante a co-gasificação de C.D.R com carvão. A presença de material inorgânico nas cinzas dos combustíveis utilizados poderá ter alguma influência na formação e subsequentes reacções de H2S e HCl, tornando-se importante compreender qual a extensão da influência destes materiais na formação destas espécies, encaradas como contaminantes do gás produzido. A utilização de misturas de C.D.R. com carvão em gasificação poderá contribuir para a redução das quantidades de resíduos depositadas em aterro. Sendo a gasificação um processo menos poluente do que a incineração, a gasificação destes materiais poderá traduzir-se num menor impacto ambiental. Os C.D.R. são materiais heterogéneos e portanto as quantidades de S, Cl e material inorgânico poderão variar tornando relevante o estudo de potenciais sinergias entre os C.D.R. e o carvão com o objectivo de 1) minimizar a emissão de poluentes gasosos, 2) minimizar a quantidade de cinza produzida e 3) aproveitar o material inorgânico, que pode desempenhar actividade catalítica conduzindo à redução da formação de H2S e HCl. Com este estudo foi determinada uma aparente relação linear entre os teores de enxofre nos combustíveis e a formação de H2S, sendo que no entanto a forma sob a qual o enxofre se encontra nos combustíveis poderá desempenhar um importante papel na conversão do enxofre em H2S. No caso do HCl, a referida relação não pareceu ser tão clara. Foi igualmente determinado que maiores temperaturas de operação promovem a formação de H2S, ao mesmo tempo que reduzem a formação de HCl, e que enquanto o aumento da quantidade de oxigénio poderá conduzir à redução da formação de H2S, não terá impacto significativo na formação de HCl. No que diz respeito aos metais foi verificado que Ca, Fe e Zn terão um papel importante na redução da formação de H2S e HCl, enquanto que K e Na terão apenas influência na formação de HCl e o Al e a Si, não afectaram nem a formação de H2S nem a de HCl.

Improving the IEEE 802.15.4 Slotted CSMA/CA MAC for time-critical events in wireless sensor networks

In beacon-enabled mode, IEEE 802.15.4 is ruled by the slotted CSMA/CA Medium Access Control (MAC) protocol. The standard slotted CSMA/CA mechanism does not provide any means of differentiated services to improve the quality of service for timecritical events (such as alarms, time slot reservation, PAN management messages etc.). In this paper, we present and discuss practical service differentiation mechanisms to improve the performance of slotted CSMA/CA for time-critical events, with only minor add-ons to the protocol. The contribution of our proposal is more practical than theoretical since our initial requirement is to leave the original algorithm of the slotted CSMA/CA unchanged, but rather tuning its parameters adequately according to the criticality of the messages. We present a simulation study based on an accurate model of the IEEE 802.15.4 MAC protocol, to evaluate the differentiated service strategies. Four scenarios with different settings of the slotted CSMA/CA parameters are defined. Each scenario is evaluated for FIFO and Priority Queuing. The impact of the hiddennode problem is also analyzed, and a solution to mitigate it is proposed.

A comprehensive simulation study of slotted CSMA/CA for IEEE 802.15.4 wireless sensor networks

In this paper, we analyze the performance limits of the slotted CSMA/CA mechanism of IEEE 802.15.4 in the beacon-enabled mode for broadcast transmissions in WSNs. The motivation for evaluating the beacon-enabled mode is due to its flexibility for WSN applications as compared to the non-beacon enabled mode. Our analysis is based on an accurate simulation model of the slotted CSMA/CA mechanism on top of a realistic physical layer, with respect to the IEEE 802.15.4 standard specification. The performance of the slotted CSMA/CA is evaluated and analyzed for different network settings to understand the impact of the protocol attributes (superframe order, beacon order and backoff exponent) on the network performance, namely in terms of throughput (S), average delay (D) and probability of success (Ps). We introduce the concept of utility (U) as a combination of two or more metrics, to determine the best offered load range for an optimal behavior of the network. We show that the optimal network performance using slotted CSMA/CA occurs in the range of 35% to 60% with respect to an utility function proportional to the network throughput (S) divided by the average delay (D).

On the performance limits of slotted CSMA/CA in IEEE 802.15.4 for broadcast transmissions in wireless sensor networks

The IEEE 802.15.4 has been adopted as a communication protocol standard for Low-Rate Wireless Private Area Networks (LRWPANs). While it appears as a promising candidate solution for Wireless Sensor Networks (WSNs), its adequacy must be carefully evaluated. In this paper, we analyze the performance limits of the slotted CSMA/CA medium access control (MAC) mechanism in the beacon-enabled mode for broadcast transmissions in WSNs. The motivation for evaluating the beacon-enabled mode is due to its flexibility and potential for WSN applications as compared to the non-beacon enabled mode. Our analysis is based on an accurate simulation model of the slotted CSMA/CA mechanism on top of a realistic physical layer, with respect to the IEEE 802.15.4 standard specification. The performance of the slotted CSMA/CA is evaluated and analyzed for different network settings to understand the impact of the protocol attributes (superframe order, beacon order and backoff exponent), the number of nodes and the data frame size on the network performance, namely in terms of throughput (S), average delay (D) and probability of success (Ps). We also analytically evaluate the impact of the slotted CSMA/CA overheads on the saturation throughput. We introduce the concept of utility (U) as a combination of two or more metrics, to determine the best offered load range for an optimal behavior of the network. We show that the optimal network performance using slotted CSMA/CA occurs in the range of 35% to 60% with respect to an utility function proportional to the network throughput (S) divided by the average delay (D).