Modeling grouped survival data with time-dependent covariates

In this article, proportional hazards and logistic models for grouped survival data were extended to incorporate time-dependent covariates. The extension was motivated by a forestry experiment designed to compare five different water stresses in Eucalyptus grandis seedlings. The response was the seedling lifetime. The data set was grouped since there were just three occasions in which the seedlings was visited by the researcher. In each of these occasions also the shoot height was measured and therefore it is a time-dependent covariate. Both extended models were used in this example, and the results were very similar.

Solarização em microcosmo: efeito de materiais vegetais na sobrevivência de fitopatógenos de solo e na produção de voláteis

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Imbibition of Swietenia macrophylla (Meliaceae) seeds: the role of stomata

Background and Aims the occurrence of stomata in seed coats is uncommon and there is limited information about their function(s). The aim of this study was to verify the distribution of stomata in seed coats of Swietenia macrophylla and to relate it to the imbibition process and aspects of the structure of the outer integument layers.Methods For the structural and ultrastructural studies, the seeds were processed using the usual techniques and studied under light and scanning electron microscopes. Histochemical tests were employed to identify the cell wall composition in the different seed coat portions. To assess the role of the stomata in the imbibition, non-impervious seeds were compared with partially impervious ones, in which only the embryo, median or hilar regions were left free. Further, the apoplastic pathway marker was employed to confirm the role of the stomata as sites of water passage during imbibition.Key Results A positive relationship was observed between seed coat thickness and stomata density. The stomata were devoid of movement, with a large pore. They occurred in large numbers in the embryo region and extended with lower frequency towards the wing. Imbibition rates were related to stomata density, suggesting that the stomata act as preferential sites for water entry in the S. macrophylla seeds.Conclusions At maturity, the stomata in the seed coat play a significant role in seed imbibition. The data may also infer that these permanently opened stomata have an important role in gas exchange during seed development, aiding embryo respiration.

Ontogenesis, structure and ultrastructure of Hymenaea stigonocarpa (Fabaceae : Caesalpinioideae) colleters

The genus Hymenaea is characterized by a great diversity of secretory structures, but there are no reports of colleters yet. The objectives of this study are to report the occurrence and describe the origin and structure of colleters in Hymenaea stigonocarpa Mart. ex Hayne. Shoot apex samples were collected, fixed, and processed for light microscopy, scanning electron microscopy, and transmission electron microscopy as per usual methods. Colleters occur predominantly on the stipule's adaxial side. These structures are found at the base on a narrow strip, corresponding to the median vein up to half the length of the stipule. When present on the abaxial side, they are concentrated at the base and restricted to the margins. Colleters develop from the protoderm; they are elongate and club-shaped. Their body has no stratification; their surface cells differ from the inner cells only in position and presence of cuticle. Colleter cells have thin walls, dense cytoplasm, large nuclei, many mitochondria, rough endoplasmic reticulum, and abundant dictyosomes. Histochemical tests with Ruthenium red showed pectic compounds in the cytosol. In H. stigonocarpa, colleter arrangement is compatible with the hypothesis that they protect shoot apex. In this species, protection is reinforced by the sheath formed by the stipule pairs.

INTERAÇÕES ENTRE MAGNÉSIO E MICRONUTRIENTES METÁLICOS DURANTE O DESENVOLVIMENTO DE FEIJOEIRO, em SOLUÇÃO NUTRITIVA

Este estudo avaliou as possíveis interações entre o magnésio e os micronutrientes manganês, zinco, cobre e ferro, pela determinação de seus teores nos diferentes órgãos do Phaseolus vulgaris L. cv Carioca, nas 5 coletas, realizadas a cada 14 dias, a partir do 25o dia após a semeadura. As plantas foram cultivadas em solução nutritiva com nível completo (48,6 mg.L-1), baixos (2,4 e 24,3 mg.L-1) e elevados (72,9 e 97,2 mg.L-1) de Mg. O delineamento experimental foi inteiramente casualizado, em esquema fatorial. Com os níveis baixos de Mg, observou-se a diminuição do teor desse mineral nas raízes, caule e folhas e de Cu nas folhas e o aumento de Zn nas folhas e de Mn nas raízes. Com 97,2 mg.L-1 de Mg, observou-se o aumento desse elemento nas folhas, sugerindo sua absorção e translocação das raízes para a parte aérea. Nesses feijoeiros também observou-se diminuição de Cu no caule e nos frutos e de Mn nas raízes. As concentrações de Mg e Mn nas raízes variaram sempre de modo oposto, com os diferentes tratamentos utilizados. Isso sugere uma relação inversa na absorção desses nutrientes. Os resultados demonstraram uma pequena influência da variação dos níveis de Mg na solução sobre os micronutrientes que, no entanto, pode alterar o comportamento da planta.

Estruturas secretoras de mucilagem em Hibiscus pernambucensis Arruda (Malvaceae): distribuição, caracterização morfoanatômica e histoquímica

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Morfoanatomia do sistema caulinar de Canna edulis Kerr-Gawler (Cannaceae)

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Substratos e regulador vegetal no enraizamento de estacas de pitaya

A pitaya é uma cactácea originária das florestas tropicais americanas que produz frutos exóticos bem apreciados e comercializados, principalmente no continente asiático. Contudo, ainda é uma espécie vegetal que demanda informações técnicas de cultivo nas áreas agrícolas brasileiras, motivando pesquisas em várias áreas do conhecimento. Objetivou-se avaliar diferentes substratos no enraizamento de cladódios imersos e não imersos no regulador de crescimento, ácido naftalenacético (ANA), na formação e desenvolvimento inicial de raízes em estacas de Hylocereus undatus, resultando em mudas mais vigorosas e de melhor qualidade. O experimento foi conduzido sob ripado no Departamento de Produção Vegetal - setor de Horticultura da Faculdade de Ciências Agronômicas no campus de Botucatu - UNESP. O delineamento experimental foi o inteiramente aleatorizado em esquema fatorial 4 x 2 (substratos x condições) com quatro repetições. Após 60 dias da instalação do experimento foram avaliados: massa fresca e seca da parte aérea, massa fresca e seca das raízes e o comprimento da maior raiz. O crescimento e desenvolvimento radicular inicial de mudas não são influenciados pelo regulador vegetal ANA. Os substratos com a presença de areia são os mais adequados para a formação de mudas vigorosas e de boa qualidade. A mistura areia + esterco bovino proporciona maior acúmulo de fitomassa no sistema radicular de pitaya (H. undatus).

Yield and Composition of the Essential Oil of Basil on Plant Growth Regulators Application

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Enraizamento de estacas de brotações oriundas de estacas radiculares de amoreira-preta

This study aimed to evaluate the effect of indolyl-3-butyric acid (IBA) in promoting the rooting of blackberry shoots derived of root cuttings. This work was conducted from June to August 2010, at UNESP, Botucatu, São Paulo state, Brazil, under the randomized block design, with six concentrations of IBA and six replications of 12 shoot cuttings per plot. The treatments consisted of six concentrations of IBA, as a solution: T1= 0 mg L(-1), T2= 250 mg L(-1), T3= 500 mg L(-1), T4= 1000 mg L(-1), T5= 2000 mg L(-1) and T6= 4000 mg L(-1) applied on the basis of shoots cuttings for ten seconds. After 60 days, the percentage of rooting, the root fresh weight, the root dry weight, the length of root and the survival percentage, were evaluated. The concentration of 250 mg L(-1) IBA favored characteristics as fresh and dry weight of roots originating from roots of blackberry. The highest concentrations of IBA inhibited root development and characteristics ??? (please, verify the 'Resumo") of the shoots cuttings.

Growth and photosynthetic down-regulation in Coffea arabica in response to restricted root volume

Coffee (Coffea arabica L.) plants were grown in small (3-L), medium (10-L) and large (24-L) pots for 115 or 165 d after transplanting (DAT), which allowed different degrees of root restriction. Effects of altered source : sink ratio were evaluated in order to explore possible stomatal and non-stomatal mechanisms of photosynthetic down-regulation. Increasing root restriction brought about large and general reductions in plant growth associated with a rising root : shoot ratio. Treatments did not affect leaf water potential or leaf nutrient status, with the exception of N content, which dropped significantly with increasing root restriction even though an adequate N supply was available. Photosynthesis was severely reduced when plants were grown in small pots; this was largely associated with non-stomatal factors, such as decreased Rubisco activity. At 165DAT contents of hexose, sucrose, and amino acids decreased in plants grown in smaller pots, while those of starch and hexose-P increased in plants grown in smaller pots. Photosynthetic rates were negatively correlated with the ratio of hexose to free amino acids, but not with hexose content. Activities of acid invertase, sucrose synthase, sucrose-P synthase, fructose-1,6- bisphosphatase, ADP-glucose pyrophosphorylase, starch phosphorylase, glyceraldehyde-3-P dehydrogenase, PPi : fructose-6-P 1-phosphotransferase and NADP : glyceraldehyde-3-P dehydrogenase all decreased with severe root restriction. Glycerate-3-P : Pi and glucose-6-P : fructose-6-P ratios decreased accordingly. Photosynthetic down-regulation was unlikely to have been associated directly with an end-product limitation, but rather with decreases in Rubisco. Such a down-regulation was largely a result of N deficiency caused by growing coffee plants in small pots.

The Tomato (Solanum Lycopersicum cv. Micro-Tom) Natural Genetic Variation Rg1 and the DELLA Mutant Procera Control the Competence Necessary to Form Adventitious Roots and Shoots

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Morphometry of the midgut epithelium of Diatraea saccharalis Fabricius, 1794 (Lepidoptera) parasitized by Cotesia flavipes Cameron, 1891 (Hymenoptera)

The morphometric study of the midgut in Diatraea saccharalis (Lepidoptera) larvae parasitized by the Cotesia flavipes (Hymenoptera) showed that there was significant increase in the columnar, goblet and regenerative cells and their nuclei; the midgut lumen diameter and the epithelial height were also increased in the parasitized larvae. The multivariate analysis showed that parasitism affected the columnar cell only in the posterior region, and the goblet cells along the midgut length (anterior and posterior regions). (c) 2006 Elsevier B.V. All rights reserved.

Morphometric study of the midgut epithelium in larvae of Diatraea saccharalis Fabricius (Lepidoptera: Pyralidae)

A larva de Diatraea saccharalis Fabricius (broca-da-cana) tem grande interesse econômico, pois afeta o cultivo e aproveitamento industrial da cana-de-açúcar. Entretanto, poucos são os estudos sobre a morfologia interna desse inseto. O objetivo deste trabalho foi estudar, morfometricamente, o seu epitélio intestinal, ao longo de seu comprimento, visando caracterizar regiões estruturalmente diferentes. O intestino médio de larvas no último instar foi subdividido em três regiões: proximal, mediana e distal e os fragmentos foram processados para observação em microscopia de luz. Os cortes histológicos foram analisados em sistema computadorizado de análise de imagens para medir comprimento, largura e área do epitélio, das diferentes células epiteliais, dos seus respectivos núcleos e do lúmen intestinal. Os dados obtidos foram submetidos ao teste estatístico de Kruskal-Wallis e à análise multivariada. Nossos resultados mostraram que o intestino médio apresentou-se constituído, morfometricamente, por duas diferentes regiões, proximal e distal; a região mediana apresentou valores coincidentes tanto com a região proximal quanto com a distal, sugerindo ser região intermediária. As células epiteliais (colunares, caliciformes e regenerativas), quando avaliadas pela análise estatística multivariada, não apresentaram diferença morfométrica nas diferentes regiões do intestino médio. Entretanto, a análise de variância, realizada para variáveis isoladas, mostrou que as células regenerativas apresentaram maior variabilidade morfométrica.

Morphological regional differences of epithelial cells along the midgut in Diatraea saccharalis Fabricius (Lepidoptera : Crambidae) larvae

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)