Absolute mRNA levels and transcriptional initiation rates in Saccharomyces cerevisiae.

We quantitate the absolute levels of individual mRNAs per yeast cell by hybridizing total yeast RNA with an excess of gene-specific 32P-oligonucleotides, and digesting the resulting RNA-DNA hybrids with S1 nuclease. By comparing the his3 hybridization signal from a known amount of yeast cells to the signal generated by a known amount of his3 RNA synthesized in vitro, we determine that yeast strain KY114 growing in yeast extract/peptone/glucose medium at 30 degrees C contains seven molecules of his3 mRNA per cell. Using a galactose shut-off procedure, we determined that the half-life of his3 mRNA is approximately 11 min under these conditions. From these observations, we calculate that one his3 mRNA molecule is synthesized every 140 s. Analysis of other his3 promoter derivatives suggests that the maximal transcriptional initiation rate in yeast cells is one mRNA molecule every 6-8 s. Using his3 as an internal standard, the number of mRNA molecules per cell have been determined for ded1, trp3, rps4, and gall under a variety of growth conditions. From these results, the absolute mRNA level of any yeast gene can be determined in a single hybridization experiment. Moreover, the rate of transcriptional initiation can be determined for mRNAs whose decay rates are known.

Isolation of 10 differentially expressed cDNAs in p53-induced apoptosis: activation of the vertebrate homologue of the drosophila seven in absentia gene.

We report the isolation of 10 differentially expressed cDNAs in the process of apoptosis induced by the p53 tamor suppressor. As a global analytical method, we performed a differential display of mRNA between mouse M1 myeloid leukemia cells and derived clone LTR6 cells, which contain a stably transfected temperature-sensitive mutant of p53. At 32 degrees C wild-type p53 function is activated in LTR6 cells, resulting in programmed cell death. Eight genes are activated (TSAP; tumor suppressor activated pathway), and two are inhibited (TSIP, tumor suppressor inhibited pathway) in their expression. None of the 10 sequences has hitherto been recognized as part of the p53 signaling pathway. Three TSAPs are homologous to known genes. TSAP1 corresponds to phospholipase C beta 4. TSAP2 has a conserved domain homologous to a multiple endocrine neoplasia I (ZFM1) candidate gene. TSAP3 is the mouse homologue of the Drosophila seven in absentia gene. These data provide novel molecules involved in the pathway of wild-type p53 activation. They establish a functional link between a homologue of a conserved developmental Drosophila gene and signal transduction in tumor suppression leading to programmed cell death.

Agrobacterium tumefaciens-mediated transformation of yeast.

Agrobacterium tumefaciens transfers a piece of its Ti plasmid DNA (transferred DNA or T-DNA) into plant cells during crown gall tumorigenesis. A. tumefaciens can transfer its T-DNA to a wide variety of hosts, including both dicotyledonous and monocotyledonous plants. We show that the host range of A. tumefaciens can be extended to include Saccharomyces cerevisiae. Additionally, we demonstrate that while T-DNA transfer into S. cerevisiae is very similar to T-DNA transfer into plants, the requirements are not entirely conserved. The Ti plasmid-encoded vir genes of A. tumefaciens that are required for T-DNA transfer into plants are also required for T-DNA transfer into S. cerevisiae, as is vir gene induction. However, mutations in the chromosomal virulence genes of A. tumefaciens involved in attachment to plant cells have no effect on the efficiency of T-DNA transfer into S. cerevisiae. We also demonstrate that transformation efficiency is improved 500-fold by the addition of yeast telomeric sequences within the T-DNA sequence.

Tuta absoluta (Meyrick, 1917) (Lepidoptera: Gelechiidae): adequação de uma dieta artificial e avaliação do seu controle biológico com Trichogramma pretiosum Riley em tomateiro

Tuta absoluta (Meyrick, 1917) é uma das pragas-chave da cultura do tomate e outras solanáceas na América do Sul e atualmente também na Eurásia e África. Devido aos grandes prejuízos que causa à cultura, são principalmente usados inseticidas para o seu controle. Entretanto, na busca de estratégias mais sustentáveis, cada dia adquire maior importância o uso do controle biológico, como uma das estratégias do manejo integrado de pragas. Para o desenvolvimento destas estratégias é fundamental desenvolver um método de criação de T. absoluta em laboratório, em dieta artificial, sem necessitar do hospedeiro natural, muitas vezes difícil de ser obtido e mantido em laboratório, e, de grande importância para produzir parasitoides específicos para esta praga. Dentre os parasitoides mais usados para ovos de lepidópteros está Trichogramma pretiosum Riley 1879 que é usado no controle biológico aplicado desta praga. Tendo como foco principal T. absoluta, neste trabalho foram pesquisados 1) a seleção de uma dieta artificial para este lepidóptero baseando-se em características físicas e químicas, avaliando o seu desempenho por várias gerações em laboratório, e 2) avaliação de aspectos biológicos e reprodutivos de T. pretiosum parasitando ovos de T. absoluta e aspectos físicos da planta (tricomas) para compreender o controle biológico desta praga no tomateiro. Foi encontrado que uma dieta à base de germe-de-trigo, caseína e celulose é apropriada para a criação deste lepidóptero, já que o inseto mostrou adaptação à mesma no transcorrer das gerações com base em características biológicas e de tabela de vida; adicionalmente, os ovos provenientes de T. absoluta alimentada com dieta artificial são comparáveis aos da dieta natural, no parasitismo de T. pretiosum. Com relação ao controle biológico foi demonstrado que este parasitoide desenvolvido em ovos de T. absoluta, diminui seu tamanho e desempenho com o transcorrer das gerações, apresentando menor capacidade de voo do que os insetos produzidos em A. kuenhiella, sendo necessária a liberação de altas densidades de parasitoides por ovo da praga. Foi observado que, embora o parasitismo de T. pretiosum de ovos de T. absoluta seja melhor em variedades com poucos tricomas, uma alta densidade destas estruturas não impede o controle da praga alvo dependendo da disposição destas estruturas. O controle biológico de T. absoluta com T. pretiosum tem uma ação momentânea, sendo necessárias liberações frequentes devido ao fato de os parasitoides desenvolvidos na praga serem menos competitivos com aqueles provenientes do hospedeiro alternativo que apresenta ovos maiores do que T. absoluta.

The Jewish Law Firm: Past and Present

The rise and growth of large Jewish law firms in New York City during the second half of the twentieth century was nothing short of an astounding success story. As late as 1950, there was not a single large Jewish law firm in town. By the mid-1960s, six of the largest twenty law firms were Jewish, and by 1980, four of the largest ten prestigious law firms were Jewish firms. Moreover, the accomplishment of the Jewish firms is especially striking because, while the traditional large White Anglo-Saxon Protestant law firms grew at a fast rate during this period, the Jewish firms grew twice as fast, and they did so in spite of experiencing explicit discrimination. What happened? This book chapter is a revised, updated study of the rise and growth of large New York City Jewish law firms. It is based on the public record, with respect to both the law firms themselves and trends in the legal profession generally, and on over twenty in-depth interviews with lawyers who either founded and practiced at these successful Jewish firms, attempted and failed to establish such firms, or were in a position to join these firms but decided instead to join WASP firms. According to the informants interviewed in this chapter, while Jewish law firms benefited from general decline in anti-Semitism and increased demand for corporate legal services, a unique combination of factors explains the incredible rise of the Jewish firms. First, white-shoe ethos caused large WASP firms to stay out of undignified practice areas and effectively created pockets of Jewish practice areas, where the Jewish firms encountered little competition for their services. Second, hiring and promotion discriminatory practices by the large WASP firms helped create a large pool of talented Jewish lawyers from which the Jewish firms could easily recruit. Finally, the Jewish firms benefited from a flip side of bias phenomenon, that is, they benefited from the positive consequences of stereotyping. Paradoxically, the very success of the Jewish firms is reflected in their demise by the early twenty-first century: because systematic large law firm ethno-religious discrimination against Jewish lawyers has become a thing of the past, the very reason for the existence of Jewish law firms has been nullified. As other minority groups, however, continue to struggle for equality within the senior ranks of Big Law, can the experience of the Jewish firms serve as a “separate-but-equal” blueprint for overcoming contemporary forms of discrimination for women, racial, and other minority attorneys? Perhaps not. As this chapter establishes, the success of large Jewish law firms was the result of unique conditions and circumstances between 1945 and 1980, which are unlikely to be replicated. For example, large law firms have become hyper-competitive and are not likely to allow any newcomers the benefit of protected pockets of practice. While smaller “separate-but-equal” specialized firms, for instance, ones exclusively hiring lawyer-mothers occasionally appear, the rise of large “separate-but-equal” firms is improbable.

Optical initialization, readout, and dynamics of a Mn spin in a quantum dot

We have investigated the spin preparation efficiency by optical pumping of individual Mn atoms embedded in CdTe/ZnTe quantum dots. Monitoring the time dependence of the intensity of the fluorescence during the resonant optical pumping process in individual quantum dots allows to directly probe the dynamics of the initialization of the Mn spin. This technique presents the convenience of including preparation and readout of the Mn spin in the same step. Our measurements demonstrate that Mn spin initialization, at zero magnetic field, can reach an efficiency of 75% and occurs in the tens of nanoseconds range when a laser resonantly drives at saturation one of the quantum-dot transition. We observe that the efficiency of optical pumping changes from dot-to-dot and is affected by a magnetic field of a few tens of millitesla applied in Voigt or Faraday configuration. This is attributed to the local strain distribution at the Mn location which predominantly determines the dynamics of the Mn spin under weak magnetic field. The spectral distribution of the spin-flip-scattered photons from quantum dots presenting a weak optical pumping efficiency reveals a significant spin relaxation for the exciton split in the exchange field of the Mn spin.

Spin-phonon coupling in single Mn-doped CdTe quantum dot

The spin dynamics of a single Mn atom in a laser driven CdTe quantum dot is addressed theoretically. Recent experimental results [ Gall et al. Phys. Rev. Lett. 102 127402 (2009);  Goryca et al. Phys. Rev. Lett. 103 087401 (2009)  Gall et al. Phys. Rev. B 81 245315 (2010)] show that it is possible to induce Mn spin polarization by means of circularly polarized optical pumping. Pumping is made possible by the faster Mn spin relaxation in the presence of the exciton. Here we discuss different Mn spin-relaxation mechanisms: first, Mn-phonon coupling, which is enhanced in the presence of the exciton; second, phonon induced hole spin relaxation combined with carrier-Mn spin-flip coupling and photon emission results in Mn spin relaxation. We model the Mn spin dynamics under the influence of a pumping laser that injects excitons into the dot, taking into account exciton-Mn exchange and phonon induced spin relaxation of both Mn and holes. Our simulations account for the optically induced Mn spin pumping.

A metabolomic approach to study the rhizodeposition in the tritrophic interaction: tomato, Pochonia chlamydosporia and Meloidogyne javanica

A combined chemometrics-metabolomics approach [excitation–emission matrix (EEM) fluorescence spectroscopy, nuclear magnetic resonance (NMR) and high performance liquid chromatography–mass spectrometry (HPLC–MS)] was used to analyse the rhizodeposition of the tritrophic system: tomato, the plant-parasitic nematode Meloidogyne javanica and the nematode-egg parasitic fungus Pochonia chlamydosporia. Exudates from M. javanica roots were sampled at root penetration (early) and gall development (late). EMM indicated that late root exudates from M. javanica treatments contained more aromatic amino acid compounds than the rest (control, P. chlamydosporia or P. chlamydosporia and M. javanica). 1H NMR showed that organic acids (acetate, lactate, malate, succinate and formic acid) and one unassigned aromatic compound (peak no. 22) were the most relevant metabolites in root exudates. Robust principal component analysis (PCA) grouped early exudates for nematode (PC1) or fungus presence (PC3). PCA found (PC1, 73.31 %) increased acetate and reduced lactate and an unassigned peak no. 22 characteristic of M. javanica root exudates resulting from nematode invasion and feeding. An increase of peak no. 22 (PC3, 4.82 %) characteristic of P. chlamydosporia exudates could be a plant “primer” defence. In late ones in PC3 (8.73 %) the presence of the nematode grouped the samples. HPLC–MS determined rhizosphere fingerprints of 16 (early) and 25 (late exudates) m/z signals, respectively. Late signals were exclusive from M. javanica exudates confirming EEM and 1H NMR results. A 235 m/z signal reduced in M. javanica root exudates (early and late) could be a repressed plant defense. This metabolomic approach and other rhizosphere -omics studies could help to improve plant growth and reduce nematode damage sustainably.

Records of cases before the Mayor's Court of Albany, 1786-1796

Contains a summary of cases before the court beginning with the litigants and the damages sought, the legal action, names of counsel, actions taken, and the final disposition of the case. Most actions taken relate to debt, assault and battery, and slander and libel. At the back of the manuscript are "an account of law books by me purchased in the year 1784 & 1785" [p. 120], and"a list miscellanious books bought in the year 1784 & 1785" [p. 132].

Grammatica graeca, 1763

Bound volume containing a handwritten Greek grammar compiled by Joseph Drury beginning in 1763. The last sixteen pages contain a historical poem beginning, “Mason might once assert a Poets Claim. / But he must needs write.” The poem contains references to the “Great Patriot P—,“ the Roman conquest of Gall, Caeser, Versailles, and includes the verses, “How the King doth all his Cooks excel / Besides he longs to kiss his P / Saving your presence Louis keeps a whore.”

East and Central China, ca. 1738 (Raster Image)

This layer is a georeferenced raster image of the historic paper map entitled: Regni Sinae vel Sinae propriae mappa et descriptio geographica : ex mappis particularibus, quas Sinarum rex Canghi opera patrum missionariorum é S.I. in provincias regni universi ejus rei gratia ablegatorum concinnari fecit, perfecta, publicoque primum communicata in opere magnificentissimo R.P. du Halde, et ab Anvillaeo gall. reg. geographo in compendiosiorem hanc formam reducta, nunc secundum magis legitimas projectionis stereographicae leges reformata, studio Ioh. Matth. Hasii, math. p.p. It was published by impensis Homanianorum Heredum, ca. 1738. Scale [ca. 1:5,250,000]. Covers East and Central China, and a small portion of Mongolia. Map in Latin.The image inside the map neatline is georeferenced to the surface of the earth and fit to the Asia North Lambert Conformal Conic coordinate system. All map collar and inset information is also available as part of the raster image, including any inset maps, profiles, statistical tables, directories, text, illustrations, index maps, legends, or other information associated with the principal map. This map shows features such as drainage, cities and other human settlements, roads, territorial and administrative, boundaries, shoreline features, and more.This layer is part of a selection of digitally scanned and georeferenced historic maps from the Harvard Map Collection. These maps typically portray both natural and manmade features. The selection represents a range of originators, ground condition dates, scales, and map purposes.

World Bathymetric Chart of the Oceans, 1899 (Raster Image)

This layer is a georeferenced raster image of the historic paper map entitled: Bathymetrical chart of the oceans, showing the "deeps" according to Sir John Murray. It was published by the Royal Geographical Society in 1899. Scale [ca. 1:100,000,000]. The image inside the map neatline is georeferenced to the surface of the earth and fit to the 'World Gall Stereographic' projection with the central meridian at 20.00000 degrees west. All map collar and inset information is also available as part of the raster image, including any inset maps, profiles, statistical tables, directories, text, illustrations, index maps, legends, or other information associated with the principal map. This map shows features such as drainage, shoreline features, and more. Relief shown by hypsometric tints. Depths shown by gradient tints. This layer is part of a selection of digitally scanned and georeferenced historic maps from the Harvard Map Collection and the Harvard University Library as part of the Open Collections Program at Harvard University project: Organizing Our World: Sponsored Exploration and Scientific Discovery in the Modern Age. Maps selected for the project correspond to various expeditions and represent a range of regions, originators, ground condition dates, scales, and purposes.

Arabian Peninsula, ca. 1747-1767 (Raster Image)

This layer is a georeferenced raster image of the historic paper map entitled: Carte de la coste d'Arabie, Mer Rouge et Golfe de Perse : tir�e de la Carte de l'Oc�an Oriental publi�e en 1740 par Ordre de Mgr le Comte de Maurepas augment�e sur des remarques particuli�res et dress�e sur des observations astronomiques = Kaart van de Kust van Arabi�, de Roode-Zee en de Gulf van Persi� Gemaakt na de Fransse-Kaart van den Ooster-Ocean uitgegeven A. 1740 op Bevel van den Hre Grave de Maurepas Vermeederd op byzondere Aanmerkingen, en geschikt volgens Sterrekundige-Waarnemingen, J. V. Schley. It was published by Pierre de Hondt between 1747 and 1767. Scale [ca. 1:14,000,000]. Covers the Arabian Peninsula. Map in French and Dutch. The image inside the map neatline is georeferenced to the surface of the earth and fit to the World Gall Stereographic projection. All map collar and inset information is also available as part of the raster image, including any inset maps, profiles, statistical tables, directories, text, illustrations, index maps, legends, or other information associated with the principal map. This map shows features such as drainage, cities and other human settlements, shoreline features, and more. This layer is part of a selection of digitally scanned and georeferenced historic maps from the Harvard Map Collection as part of the Open Collections Program at Harvard University project: Islamic Heritage Project. Maps selected for the project represent a range of regions, originators, ground condition dates, scales, and purposes. The Islamic Heritage Project consists of over 100,000 digitized pages from Harvard's collections of Islamic manuscripts and published materials. Supported by Prince Alwaleed Bin Talal and developed in association with the Prince Alwaleed Bin Talal Islamic Studies Program at Harvard University.

Southeast Asia, ca. 1650 (Raster Image)

This layer is a georeferenced raster image of the historic paper map entitled: Insularum Indiae Orientalis : nova descriptio, Ioannis Ianssonius. It was published by Ioannis Ianssonius ca. 1650. Scale [ca. 1:12,000,000]. Cover Southeast Asia. Map in Latin. The image inside the map neatline is georeferenced to the surface of the earth and fit to the World Gall Stereographic projection. All map collar and inset information is also available as part of the raster image, including any inset maps, profiles, statistical tables, directories, text, illustrations, index maps, legends, or other information associated with the principal map. This map shows features such as drainage, cities and other human settlements, territorial boundaries, shoreline features, and more. Relief shown pictorially. This layer is part of a selection of digitally scanned and georeferenced historic maps from the Harvard Map Collection as part of the Open Collections Program at Harvard University project: Islamic Heritage Project. Maps selected for the project represent a range of regions, originators, ground condition dates, scales, and purposes. The Islamic Heritage Project consists of over 100,000 digitized pages from Harvard's collections of Islamic manuscripts and published materials. Supported by Prince Alwaleed Bin Talal and developed in association with the Prince Alwaleed Bin Talal Islamic Studies Program at Harvard University.