Implementation of X-ray diffraction in the measurement of residual thermal strains

Microelectronic systems are multi-material, multi-layer structures, fabricated and exposed to environmental stresses over a wide range of temperatures. Thermal and residual stresses created by thermal mismatches in films and interconnections are a major cause of failure in microelectronic devices. Due to new device materials, increasing die size and the introduction of new materials for enhanced thermal management, differences in thermal expansions of various packaging materials have become exceedingly important and can no longer be neglected. X-ray diffraction is an analytical method using a monochromatic characteristic X-ray beam to characterize the crystal structure of various materials, by measuring the distances between planes in atomic crystalline lattice structures. As a material is strained, this interplanar spacing is correspondingly altered, and this microscopic strain is used to determine the macroscopic strain. This thesis investigates and describes the theory and implementation of X-ray diffraction in the measurement of residual thermal strains. The design of a computer controlled stress attachment stage fully compatible with an Anton Paar heat stage will be detailed. The stress determined by the diffraction method will be compared with bimetallic strip theory and finite element models.

Aplicação de espectroscopia no infravermelho médio e calibração multivariada para quantificação de adulterantes e teor em biodiesel de óleo de palma com óleo de soja, soja residual e diesel

In this work, it was developed and validated methodologies that were based on the use of Infrared Spectroscopy Mid (MIR) combined with multivariate calibration Square Partial Least (PLS) to quantify adulterants such as soybean oil and residual soybean oil in methyl and ethyl palm biodiesels in the concentration range from 0.25 to 30.00 (%), as well as to determine methyl and ethyl palm biodiesel content in their binary mixtures with diesel in the concentration range from 0.25 to 30.00 (%). The prediction results showed that PLS models constructed are satisfactory. Errors Mean Square Forecast (RMSEP) of adulteration and content determination showed values of 0.2260 (%), with mean error (EM) with values below 1.93 (%). The models also showed a strong correlation between actual and predicted values, staying above 0.99974. No systematic errors were observed, in accordance to ASTM E1655- 05. Thus the built PLS models, may be a promising alternative in the quality control of this fuel for possible adulterations or to content determination.

Simulación y control de biofilms portadores de "Listeria monocytogenes" en la industria alimentaria

1 OBJETIVOS Evaluar el impacto de las bajas temperaturas, la interacción entre P. fluorescens (Pf) y L. monocytogenes (Lm) en biofilms (BF) mixtos y la capacidad para persistir de Lm sobre (i) la capacidad de Lm para desarrollar BF; (ii) los parámetros estructurales de los BF formados; (iii) la respuesta de las células adheridas de Lm frente al tratamiento con quitosano; (iiii) y su capacidad para recuperarse tras el tratamiento, tanto a nivel de densidad celular como estructural. Además, se pretendió valorar el quitosano como agente de limpieza y desinfección de los BF en la industria alimentaria, profundizando en su impacto sobre la estructura. 2 METODOLOGÍA Para llevar a cabo estos objetivos se seleccionaron un total de 10 cepas de Lm (6 persistentes y 3 esporádicas aisladas por Ortiz y col. (2010) de una industria cárnica y la cepa Lm Scott A como referencia) y la cepa Pf ATCC 948TM para formar BF puros, de cada especie, y mixtos, de Pf y cada una de las cepas de Lm, iniciando los cultivos a un nivel de cada una de las bacterias de 104 UFC·ml-1. Para la formación de BF se empleó un sistema en batch, en el que cupones de vidrio desechables (22x22 mm) semisumergidos actuaron como soporte para la adhesión. Los BF se desarrollaron a 20°C (BF “templados”) y 4°C (BF “fríos”). Los tratamientos con quitosano al 1% (w/v) consistieron en la inmersión durante 1h. Para la recuperación, los cupones tratados se revitalizaron en medio fresco (Trytone Soya Broth, TSB) a 20°C/48h. La densidad celular adherida antes, después y durante la revitalización se determinó mediante siembra del BF residual recogido del cupón en medios generales, o selectivos en el caso de los BF mixtos. Para la determinación de la biomasa adherida mediante densitometría (λ=520-570 nm), los BF fueron teñidos con una solución al 1‰ de azul de coomassie. Para las observaciones de la estructura mediante microscopía confocal láser de barrido (CLSM) las muestras se tiñeron con diferentes fluorocromos, procesándose las imágenes obtenidas mediante el software Imaris 8.2. El tratamiento estadístico de los datos se hizo con el software Statgraphics Centurion...

Predicting residual stiffness of cracked composite laminates subjected to multi-axial in-plane loading

Peer reviewed

Predicting residual stiffness of cracked composite laminates subjected to multi-axial in-plane loading

Peer reviewed

Self-insuring environmental liabilities : a residual risk-bearer’s perspective

Peer reviewed

On Provable Algorithms for Determination of Continuous Protein Interdomain Motions from Residual Dipolar Couplings

Dynamics of biomolecules over various spatial and time scales are essential for biological functions such as molecular recognition, catalysis and signaling. However, reconstruction of biomolecular dynamics from experimental observables requires the determination of a conformational probability distribution. Unfortunately, these distributions cannot be fully constrained by the limited information from experiments, making the problem an ill-posed one in the terminology of Hadamard. The ill-posed nature of the problem comes from the fact that it has no unique solution. Multiple or even an infinite number of solutions may exist. To avoid the ill-posed nature, the problem needs to be regularized by making assumptions, which inevitably introduce biases into the result.

Here, I present two continuous probability density function approaches to solve an important inverse problem called the RDC trigonometric moment problem. By focusing on interdomain orientations we reduced the problem to determination of a distribution on the 3D rotational space from residual dipolar couplings (RDCs). We derived an analytical equation that relates alignment tensors of adjacent domains, which serves as the foundation of the two methods. In the first approach, the ill-posed nature of the problem was avoided by introducing a continuous distribution model, which enjoys a smoothness assumption. To find the optimal solution for the distribution, we also designed an efficient branch-and-bound algorithm that exploits the mathematical structure of the analytical solutions. The algorithm is guaranteed to find the distribution that best satisfies the analytical relationship. We observed good performance of the method when tested under various levels of experimental noise and when applied to two protein systems. The second approach avoids the use of any model by employing maximum entropy principles. This 'model-free' approach delivers the least biased result which presents our state of knowledge. In this approach, the solution is an exponential function of Lagrange multipliers. To determine the multipliers, a convex objective function is constructed. Consequently, the maximum entropy solution can be found easily by gradient descent methods. Both algorithms can be applied to biomolecular RDC data in general, including data from RNA and DNA molecules.

Contributors to and impact of residual shunting after device closure of atrial septal defects.

BACKGROUND: The prevalence of residual shunt in patients after device closure of atrial septal defect and its impact on long-term outcome has not been previously defined. METHODS: From a prospective, single-institution registry of 408 patients, we selected individuals with agitated saline studies performed 1 year after closure. Baseline echocardiographic, invasive hemodynamic, and comorbidity data were compared to identify contributors to residual shunt. Survival was determined by review of the medical records and the Social Security Death Index. Survival analysis according to shunt included construction of Kaplan-Meier curves and Cox proportional hazards modeling. RESULTS: Among 213 analyzed patients, 27% were men and age at repair was 47 ± 17 years. Thirty patients (14%) had residual shunt at 1 year. Residual shunt was more common with Helex (22%) and CardioSEAL/STARFlex (40%) occluder devices than Amplatzer devices (9%; P = .005). Residual shunts were more common in whites (79% vs 46%, P = .004). At 7.3 ± 3.3 years of follow-up, 13 (6%) of patients had died, including 8 (5%) with Amplatzer, 5 (25%) with CardioSEAL/STARFlex, and 0 with Helex devices. Patients with residual shunting had a higher hazard of death (20% vs 4%, P = .001; hazard ratio 4.95 [1.59-14.90]). In an exploratory multivariable analysis, residual shunting, age, hypertension, coronary artery disease, and diastolic dysfunction were associated with death. CONCLUSIONS: Residual shunt after atrial septal defect device closure is common and adversely impacts long-term survival.

Application of self-quenched JH consensus primers for real-time quantitative PCR of IGH gene to minimal residual disease evaluation in multiple myeloma.

Monitoring multiple myeloma patients for relapse requires sensitive methods to measure minimal residual disease and to establish a more precise prognosis. The present study aimed to standardize a real-time quantitative polymerase chain reaction (PCR) test for the IgH gene with a JH consensus self-quenched fluorescence reverse primer and a VDJH or DJH allele-specific sense primer (self-quenched PCR). This method was compared with allele-specific real-time quantitative PCR test for the IgH gene using a TaqMan probe and a JH consensus primer (TaqMan PCR). We studied nine multiple myeloma patients from the Spanish group treated with the MM2000 therapeutic protocol. Self-quenched PCR demonstrated sensitivity of >or=10(-4) or 16 genomes in most cases, efficiency was 1.71 to 2.14, and intra-assay and interassay reproducibilities were 1.18 and 0.75%, respectively. Sensitivity, efficiency, and residual disease detection were similar with both PCR methods. TaqMan PCR failed in one case because of a mutation in the JH primer binding site, and self-quenched PCR worked well in this case. In conclusion, self-quenched PCR is a sensitive and reproducible method for quantifying residual disease in multiple myeloma patients; it yields similar results to TaqMan PCR and may be more effective than the latter when somatic mutations are present in the JH intronic primer binding site.

Minimal residual disease monitoring in multiple myeloma: a comparison between allelic-specific oligonucleotide real-time quantitative polymerase chain reaction and flow cytometry.

BACKGROUND AND OBJECTIVES: Minimal residual disease (MRD) studies are useful in multiple myeloma (MM). However, the definition of the best technique and clinical utility are still unresolved issues. The aim of this study was to analyze and compare the clinical utility of MRD studies in MM with two different techniques: allelic-specific oligonucleotide real-time quantitative PCR (ASO-RQ-PCR), and flow cytometry (FCM). DESIGN AND METHODS: Bone marrow samples from 32 MM patients who had achieved complete response after transplantation were evaluated by ASO-RQ-PCR, using TaqMan technology, and multiparametric FCM. RESULTS: ASO-RQ-PCR was only applicable in 75% of patients for a variety of technical reasons, while FCM was applicable in up to 90%. Therefore, simultaneous PCR/FCM analysis was possible in only 24 patients. The number of residual tumor cells identified by both techniques was very similar (mean=0.29%, range=0.001-1.61%, correlation coefficient=0.861). However, RQ-PCR was able to detect residual myelomatous cells in 17 patients while FCM only did so in 11; thus, 6 cases were FCM negative but PCR positive, all of them displaying a very low number of clonal cells (median=0.014%, range=0.001-0.11). Using an MRD threshold of 0.01% (10(-4)) two risk groups with significantly different progression-free survival could be identified by either PCR (34 vs. 15m, p=0.04) or FCM (27 vs. 10m, p=0.05). INTERPRETATION AND CONCLUSIONS: Although MRD evaluation by ASO-RQ-PCR is slightly more sensitive and specific than FCM, it is applicable in a lower proportion of MM patients and is more time-consuming, while both techniques provide similar prognostic information.

Incomplete DJH rearrangements as a novel tumor target for minimal residual disease quantitation in multiple myeloma using real-time PCR.

The hypervariable regions of immunoglobulin heavy-chain (IgH) rearrangements provide a specific tumor marker in multiple myeloma (MM). Recently, real-time PCR assays have been developed in order to quantify the number of tumor cells after treatment. However, these strategies are hampered by the presence of somatic hypermutation (SH) in VDJH rearrangements from multiple myeloma (MM) patients, which causes mismatches between primers and/or probes and the target, leading to a nonaccurate quantification of tumor cells. Our group has recently described a 60% incidence of incomplete DJH rearrangements in MM patients, with no or very low rates of SH. In this study, we compare the efficiency of a real-time PCR approach for the analysis of both complete and incomplete IgH rearrangements in eight MM patients using only three JH consensus probes. We were able to design an allele-specific oligonucleotide for both the complete and incomplete rearrangement in all patients. DJH rearrangements fulfilled the criteria of effectiveness for real-time PCR in all samples (ie no unspecific amplification, detection of less than 10 tumor cells within 10(5) polyclonal background and correlation coefficients of standard curves higher than 0.98). By contrast, only three out of eight VDJH rearrangements fulfilled these criteria. Further analyses showed that the remaining five VDJH rearrangements carried three or more somatic mutations in the probe and primer sites, leading to a dramatic decrease in the melting temperature. These results support the use of incomplete DJH rearrangements instead of complete somatically mutated VDJH rearrangements for investigation of minimal residual disease in multiple myeloma.

Construcción de índices de biomasa para los recursos anchoveta (Engraulis ringens) y jurel (Trachurus murphyi) del Ecosistema de afloramiento peruano usando modelos empíricos basados en información acústica

Los principales recursos pesqueros pelágicos de interés económico en el Perú son anchoveta (Engraulis ringens), jurel (Trachurus murphyi) y caballa (Scomber japonicus) [3]. Para su evaluación, se lleva a cabo cruceros de evaluación acústica en los que se integra información de ecoabundancia y proporción de tallas por especie para obtener valores de biomasa y abundancia. Sin embargo, para especies no objetivo (como jurel), dichos valores resultan poco confiables por la lejanía entre los puntos de muestreo biométrico y acústico. Para resolver este inconveniente, el presente trabajo propuso utilizar modelos empíricos (de tipo GAM y GLM) integrando variables ambientales y de seguimiento de desembarques con la finalidad de generar índices relativos y absolutos para anchoveta y jurel en el período de 1996-2013 dentro del área de las 200 mn frente a la costa peruana. Los resultados obtenidos realzaron la importancia de los lances de comprobación para la obtención de estimaciones robustas de biomasa. Así mismo, se observó que, para anchoveta, los modelos empíricos sí produjeron un buen índice relativo y absoluto, mejorando la utilización de la ecoabundancia por sí sola. Para jurel, sin embargo, el modelo final calibrado resultó en la obtención de un mejor índice relativo. Se recomienda además, la obtención de información de tallas y pesos medios de desembarques para jurel con la finalidad de mejorar las estimaciones de biomasa y abundancia.

Evaluación del estado poblaciónal del Cangrejo violáceo Platyxanthus orbignyi (Milne Edwards y Lucas, 1843) del área de Lambayeque por medio de un modelo dinámico de Biomasa

Se hace un análisis del estado poblacional del cangrejo violáceo Platyxanthus orbignyi (Milne Edwards y Lucas, 1843) del litoral de Lambayeque – Perú para el periodo 2001-2010 por medio de: 1) El modelo dinámico de biomasa de Schaefer en su versión de error de observación; a este modelo se le introdujo la variable ambiental anomalía de la temperatura superficial del mar (ATSM) del área de San José (Lambayeque) y se obtuvo 2) el modelo dinámico con variable ambiental, ambos basados en datos de captura, esfuerzo y CPUE. Se utilizó el método de máxima verosimilitud en el proceso de ajuste y el bootstrap para determinar los intervalos de confianza de los parámetros. Los parámetros poblacionales y pesqueros estimados por el modelo dinámico de biomasa de Schaefer (MDB) fueron: K: 750 000 kg, r : 0,21 y q: 8,36 x 10-6 y por el modelo dinámico con variable ambiental (MDVA) los parámetros fueron K: 765 000 kg, r: 0,23 y q: 8,02 x 10-6. Con los valores de los parámetros estimados mediante el MDB y el MDVA se calcularon los principales puntos biológicos de referencia (PBR) los cuales fueron: MRS: 39 822 kg, BMRS: 375 000 kg, fMRS: 12 561 nasas, FMRS: 0,11, F0.1: 0,10 para el MDB; y MRS: 44 069 kg, BMRS: 382 500 kg, fMRS: 13 782 nasas, FMRS: 0,12, F0.1: 0,10 para el MDVA. Los resultados indican que el estado actual de la pesquería del cangrejo violáceo del Litoral de Lambayeque se encuentra muy cerca al nivel óptimo. En vista de que no se dispone de información de evaluaciones directas de este recurso que confirme o no los resultados del MDB y MDVA y en virtud de la calidad de datos, se sugiere que el manejo de la pesquería sea del tipo adaptativo alrededor del punto de referencia F0.1 y teniendo en cuenta las condiciones ambientales.

Generic wind estimation and compensation based on residual generators and higher-order sliding mode schemes

This master thesis proposes a solution to the approach problem in case of unknown severe microburst wind shear for a fixed-wing aircraft, accounting for both longitudinal and lateral dynamics. The adaptive controller design for wind rejection is also addressed, exploiting the wind estimation provided by suitable estimators. It is able to successfully complete the final approach phase even in presence of wind shear, and at the same time aerodynamic envelope protection is retained. The adaptive controller for wind compensation has been designed by a backstepping approach and feedback linearization for time-varying systems. The wind shear components have been estimated by higher-order sliding mode schemes. At the end of this work the results are provided, an autonomous final approach in presence of microburst is discussed, performances are analyzed, and estimation of the microburst characteristics from telemetry data is examined.

Residual Stresses and Fatigue Behavior of Welded Structural Members, HR-94, 1967

A research project entitled "Residual Stresses and Fatigue Behavior of Welded Structural Members" was conducted at the Structural Research Laboratory of the Engineering Research Institute at Iowa State University under the sponsorship of the Iowa State Highway Commission. The objective of the project was to study experimentally the fatigue behavior of flange plates in welded beam sections as influenced by different residual stress distributions which are caused by different sizes of welds.