Chlorophyll fluorescence lifetimes and variable fluorescence parameters from phytoplankton in the global ocean

In situ data was collected between 2008-2014 in upper ocean. This data set includes the date, local time, coordinate, lifetime value, and variable fluorescence values.

Total phytoplankton abundance and biomass in the surface and fluorescence maximum layers and contributions of dominant species to their values in the Werstern Arctic in July-August 2003

Phytoplankton community was studied in the Bering Strait and over the shelf, continental slope, and deep-water zones of the Chukchi and Beaufort Seas in the middle of the vegetative season (July-August 2003). Its structure was analyzed in relation to ice conditions and seasonal patterns of water warming, stratification, and nutrient concentrations. Overall variations in phytoplankton abundance from 200 to 6000000 cells/l and biomass from 0.1 to 444.1 µg C/l.were estimated. The bulk of phytoplankton cells concentrated in the seasonal picnocline at depths 10-25 m. The highest values of cell abundance and biomass were recorded in regions influenced by inflow of Bering Sea waters or characterized by intense hydrodynamics, such as the Bering Strait, Barrow Canyon, and the outer shelf and slope of the Chukchi Sea. In the middle of the vegetative season, phytoplankton in the study region of the Western Arctic proved to comprise three successional (seasonal) assemblages: early spring, late spring, and summer assemblages. Their spatial distribution was dependent mainly on local features of hydrological and nutrient regimes rather than on general latitudinal trends of seasonal succession characteristic of arctic ecosystems.

Pigments, phytoplankton and its production parameters in the Obskaya Guba and adjacent Kara Sea in the latest September 2007

Material was collected in the Ob River estuary and the adjacent shallow Kara Sea shelf between 71°14.0'N and 75°33.0'N at the end of September 2007. Latitudinal zonation in phytoplankton distribution was demonstrated; this zonation was determined by changes in salinity and concentration of nutrients. Characteristic of the phytocenosis in the southern desalinated zone composed of freshwater diatom and green algae species were high population density (1500000 cells/l), biomass (210 ?g C/l), chlorophyll concentration (4.5 ?g/l), and uniform distribution in the water column. High primary production (~40 ?g C/l/day) was recorded in the upper 1.5 m layer. The estuarine frontal zone located to the north had a halocline at depth 3-5 m. Freshwater species with low abundance (250000 cells/l), biomass (24 ?g C/l), and chlorophyll concentration (1.5 ?g/l) dominated above the halocline. Marine diatom algae, dinoflagellates, and autotrophic flagellates formed a considerable part of the phytocenosis below the halocline; community characteristics were two-fold lower as compared with the upper layer. Maximal values of primary production (~10 ?g C/l/day) were recorded in the upper 1.5 m layer. The phytocenosis in the seaward zone was formed by marine alga species and was considerably poorer as compared with the frontal zone. Assimilation rates of carbon per chlorophyll a at the end of the vegetation season within the studied area were low, average 0.4-1.0 ?g C/?g Chl/hour in the upper layer and 0.03-0.1 ?g C/?g Chl/hour below the pycnocline.

Geochemistry and mineralogy of sediments from the Atlantis II Fracture Zone

Thirteen sediment samples, including calcareous ooze, sandy clay, volcanic sand, gravel, and volcanic breccia, from Ocean Drilling Program (ODP) Sites 732B, 734B, 734G and Conrad Cruise 27-9, Station 17, were examined. Contents of major and trace elements were determined using XRF or ICP (on samples <0.5 g). Determinations of rare earth elements (REE) were performed using ICP-MS. Mineralogy was determined using XRD. On the basis of the samples studied, the sediments accumulating in the Atlantis II Fracture Zone are characterized by generally high MgO, Cr, and Ni contents compared with other deep-sea sediments. A variety of sources are reflected in the mineralogy and geochemistry of these sediments. Serpentine, brucite, magnetite, and high MgO, Cr, and Ni contents indicate derivation from ultramafic basement. The occurrence of albite, analcime, primary mafic minerals, and smectite/chlorite in some samples, coupled with high SiO2, Al2O3, TiO2, Fe2O3, V, and Y indicate contribution from basaltic basement. A third major sediment source is characterized as biogenic material and is reflected primarily in the presence of carbonate minerals, and high CaO, Sr, Pb, and Zn in certain samples. Kaolinite, illite, quartz, and some chlorite are most likely derived from continental areas or other parts of the ocean by long-distance sediment transport in surface or other ocean currents. Proportions of source materials in the sediments reflect the thickness of the sediment cover, slope of the seafloor, and the nature of and proximity to basement lithologies. REE values are low compared to other deep-sea sediments and indicate no evidence of hydrothermal activity in the Atlantis II Fracture Zone sediments. This is supported by major- and trace-element data.

Mineral composition and geochemistry of sediments from ODP Leg 127 sites

The lithostratigraphy of Neogene hemipelagic sediments recovered from the Japan Sea during Leg 127 was revised to improve intersite consistency and to remove confusion stemming from diagenetic modification of the lithology through the opal-A to opal-CT transformation. Special emphasis was put on the presence and nature of dark-light cycles in revising the lithostratigraphy. Mineral composition analysis was conducted for samples from Sites 794, 795, and 797. In addition, major element chemical composition analysis was conducted for these same sample sets from Site 794. The result of mineral composition analysis suggests that the detrital component, which consists of such minerals as quartz, plagioclase, illite, and kaolinite plus chlorite, is diluted to various degrees by biogenic silica (opal-A) and its diagenetic equivalents (opal-CT and quartz). Smectite, on the other hand, may be a diagenetic or hydrothermal alteration product of volcanic material, although more study is necessary to confirm its origin. As a whole, vertical variation in the sediment composition is consistent with the revised lithostratigraphy and helps to characterize the redefined lithologic units quantitatively.

Chlorophyll a concentration, and proportion of time in the water column obtained by instrumented bowhead whales

Sixty hours of direct measurements of fluorescence were collected from six bowhead whales (Balaena mysticetus) instrumented with fluorometers in Greenland in April 2005 and 2006. The data were used to (1) characterize the three-dimensional spatial pattern of chlorophyll-a (Chl-a) in the water column, (2) to examine the relationships between whale foraging areas and productive zones, and (3) to examine the correlation between whale-derived in situ values of Chl-a and those from concurrent satellite images using the NASA MODIS (Moderate Resolution Imaging Spectroradiometer) EOS-AQUA satellite (MOD21, SeaWifs analogue OC3M and SST MOD37). Bowhead whales traversed 1600 km**2, providing information on diving, Chl-a structure and temperature profiles to depths below 200 m. Feeding dives frequently passed through surface waters ( >50 m) and targeted depths close to the bottom, and whales did not always target patches of high concentrations of Chl-a in the upper 50 m. Five satellite images were available within the periods whales carried fluorometers. Whales traversed 91 pixels collecting on average 761 s (SD 826) of Chl-a samples per pixel (0-136 m). The depth of the Chl-a maximum ranged widely, from 1 to 66 m. Estimates of Chl-a made from the water-leaving radiance measurements using the OC3M algorithm were highly skewed with most samples estimated as <1 mg/m**3 Chl-a, while data collected from whales had a broad distribution with Chl-a reaching >9 mg/m**3. The correlation between the satellite-derived and whale-derived Chl-a maxima was poor, a linear fit explained only 10% of the variance.

Physical oceanography from the Drake Passage and Bransfield Strait during Meteor cruise M56

This data publication is the electronic version of hydrographical and fluorometric data which were taken during the Antarctic cruise ANT I No. 56 of 'Meteor' from November 13th to December 18th 1980. The data were measured by means of the Optik Sonde (OS) of the SFB95. The data set contains the temperature and salinity profiles, the profiles of attenuation (extinction) coefficient at 670 nm wavelength and the fluorescence of chlorophyll expressed as chlorophyll a concentration values.

Supplementary material: XRF core scanning data, CaCO3 values, foraminiferal carbon and oxygen isotope data, Mg/Ca data, clay mineralogy and helium isotope results

The Paleocene-Eocene Thermal Maximum (PETM; ~56 Ma) is associated with abrupt climate change, carbon cycle perturbation, ocean acidification, as well as biogeographic shifts in marine and terrestrial biota that were largely reversed as the climatic transient waned. We report a clear exception to the behavior of the PETM as a reversing climatic transient in the eastern North Atlantic (Deep-Sea Drilling Project Site 401, Bay of Biscay) where the PETM initiates a greatly prolonged environmental change compared to other places on Earth where records exist. The observed environmental perturbation extended well past the d13C recovery phase and up to 650 kyr after the PETM onset according to our extraterrestrial 3He-based age-model. We observe a strong decoupling of planktic foraminiferal d18O and Mg/Ca values during the PETM d13C recovery phase, which in combination with results from helium isotopes and clay mineralogy, suggests that the PETM triggered a hydrologic change in western Europe that increased freshwater flux and the delivery of weathering products to the eastern North Atlantic. This state change persisted long after the carbon-cycle perturbation had stopped. We hypothesize that either long-lived continental drainage patterns were altered by enhanced hydrological cycling induced by the PETM, or alternatively that the climate system in the hinterland area of Site 401 was forced into a new climate state that was not easily reversed in the aftermath of the PETM.

Absorption characteristics, major elements and chl a content of samples from Pond 19 at Zackenberg, NE Greenland

1. Shallow arctic lakes and ponds have simple and short food webs, but large uncertainties remain about benthic-pelagic links in these systems. We tested whether organic matter of benthic origin supports zooplankton biomass in a pond in NE Greenland, using stable isotope analysis of carbon and nitrogen in the pond itself and in a 13C-enrichment enclosure experiment. In the latter, we manipulated the carbon isotope signature of benthic algae to enhance its isotopic discrimination from other potential food sources for zooplankton. 2. The cladoceran Daphnia middendorffiana responded to the 13C-enrichment of benthic mats with progressively increasing d13C values, suggesting benthic feeding. Stable isotope analysis also pointed towards a negligible contribution of terrestrial carbon to the diet of D. middendorffiana. This agreed with the apparent dominance of autochthonous dissolved organic matter in the pond revealed by analysis of coloured dissolved organic matter. 3. Daily net production by phytoplankton in the pond (18 mg C/m**2/day) could satisfy only up to half of the calculated minimum energy requirements of D. middendorffiana (35 mg C/m**2/day), whereas benthic primary production alone (145 mg C/m**2/day) was more than sufficient. 4. Our findings highlight benthic primary production as a major dietary source for D. middendorffiana in this system and suggest that benthic organic matter may play a key role in sustaining pelagic secondary production in such nutrient-limited high arctic ponds.

Geochemistry and mineralogy of variably altered dacite volcanic rocks from ODP Leg 193 sites, PACMANUS field

A geochemical, mineralogical, and isotopic database comprising 75 analyses of Ocean Drilling Program (ODP) Leg 193 samples has been prepared, representing the variable dacitic volcanic facies and alteration types observed in drill core from the subsurface of the PACMANUS hydrothermal system (Table T1. The data set comprises major elements, trace and rare earth elements (REE), various volatiles (S, F, Cl, S, SO4, CO2, and H2O), and analyses of 18O and 86Sr/87Sr for bulk rock and mineral separates (anhydrite). Furthermore, normative mineral proportions have been calculated based on the results of X-ray diffraction (XRD) analysis (Table T2) using the SOLVER function of the Microsoft Excel program. Several of the samples analyzed consist of mesoscopically distinctive domains, and separate powders were generated to investigate these hand specimen-scale heterogeneities. Images of all the samples are collated in Figure F1, illustrating the location of each powder analyzed and documenting which measurements were performed.