Total V9 rDNA information organized at the OTU level

The present data set provides a tab separated text file compressed in a zip archive. The file includes metadata for each TaraOceans V9 rDNA OTU including the following fields: md5sum = identifier of the representative (most abundant) sequence of the swarm; cid = identifier of the OTU; totab = total abundance of barcodes in this OTU; TARA_xxx = number of occurrences of barcodes in this OTU in each of the 334 samples;rtotab = total abundance of the representative barcode; pid = percentage identity of the representative barcode to the closest reference sequence from V9_PR2; lineage = taxonomic path assigned to the representative barcode ; refs = best hit reference sequence(s) with respect to the representative barcode ; taxogroup = high-taxonomic level assignation of the representative barcode. The file also includes three categories of functional annotations: (1) Chloroplast: yes, presence of permanent chloroplast; no, absence of permanent chloroplast ; NA, undetermined. (2) Symbiont (small partner): parasite, the species is a parasite; commensal, the species is a commensal; mutualist, the species is a mutualist symbiont, most often a microalgal taxon involved in photosymbiosis; no the species is not involved in a symbiosis as small partner; NA, undetermined. (3) Symbiont (host): photo, the host species relies on a mutualistic microalgal photosymbiont to survive (obligatory photosymbiosis); photo_falc, same as photo, but facultative relationship; photo_klep, the host species maintains chloroplasts from microalgal prey(s) to survive; photo_klep_falc, same as photo_klep, but facultative; Nfix, the host species must interact with a mutualistic symbiont providing N2 fixation to survive; Nfix_falc, same as Nfix, but facultative; no, the species is not involved in any mutualistic symbioses; NA, undetermined.

Environmental context of selected samples from the Tara Oceans Expedition (2009-2013)

The present data set provides contextual environmental data for samples from the Tara Oceans Expedition (2009-2013) that were selected for publication in a special issue of the SCIENCE journal (see related references below). The data set provides calculated averages of mesaurements made at the sampling location and depth, calculated averages from climatologies (AMODIS, VGPM) and satellite products.

Rock magentic investigations of ODP Site 162-983

We report natural remanent magnetization (NRM) directions and geomagnetic paleointensity proxies for part of the Matuyama Chron (0.9-2.2 Ma interval) from two sites located on sediment drifts in the Iceland Basin. At Ocean Drilling Program Sites 983 and 984, mean sedimentation rates in the late Matuyama Chron are 15.9 and 11.5 cm/kyr, respectively. For the older part of the record (>1.2 Ma), oxygen isotope data are too sparse to provide the sole basis for age model construction. The resemblance of the volume susceptibility record and a reference d18O record led us to match the two records to derive the age models. This match, based on Site 983/984 susceptibility, is consistent with available Site 983/984 benthic d18O data. Paleointensity proxies were derived from the slope of the NRM versus anhysteretic remanent magnetization plot for alternating field demagnetization in the 30-60 mT peak field range. Paleointensity lows correspond to polarity reversals at the limits of the Jaramillo, Olduvai, Cobb Mountain, and Réunion Subchrons and to seven excursions in NRM component directions. Magnetic excursions (defined here by virtual geomagnetic polar latitudes crossing the virtual geomagnetic equator) are observed at 932, 1048, 1115, 1190-1215 (Cobb Mountain Subchron), 1255, 1472-1480, 1567-1575 (Gilsa Subchron), and 1977 ka. The results indicate that geomagnetic directional excursions, associated with paleointensity minima, are a characteristic of the Matuyama Chron and probably of polarity chrons in general.