Analysis of 16S rRNA and mxaF genes revealing insights into Methylobacterium niche-specific plant association

The genus Methylobacterium comprises pink-pigmented facultative methylotrophic (PPFM) bacteria, known to be an important plant-associated bacterial group. Species of this group, described as plant-nodulating, have the dual capacity of producing cytokinin and enzymes, such as pectinase and cellulase, involved in systemic resistance induction and nitrogen fixation under specific plant environmental conditions. The aim hereby was to evaluate the phylogenetic distribution of Methylobacterium spp. isolates from different host plants. Thus, a comparative analysis between sequences from structural (16S rRNA) and functional mxaF (which codifies for a subunit of the enzyme methanol dehydrogenase) ubiquitous genes, was undertaken. Notably, some Methylobacterium spp. isolates are generalists through colonizing more than one host plant, whereas others are exclusively found in certain specific plant-species. Congruency between phylogeny and specific host inhabitance was higher in the mxaF gene than in the 16S rRNA, a possible indication of function-based selection in this niche. Therefore, in a first stage, plant colonization by Methylobacterium spp. could represent generalist behavior, possibly related to microbial competition and adaptation to a plant environment. Otherwise, niche-specific colonization is apparently impelled by the host plant.

A new species of Schizotetranychus (Acari, Prostigmata, Tetranychidae) from the Chilean fauna, with a few remarkable morphological features

Schizotetranychus tegophallos sp. nov., from papyrus sedge (Cyperus involucratus Rottb., Cyperaceae) from Santiago, Chile, is described and figured. The genital stylets of the male, palpal tarsus tactile setae and chaetotaxy of leg IV trochanter in deutonymphs are discussed.

New Neotropical cunaxine species (Acari: Prostigmata: Cunaxidae)

Four new Brazilian cunaxine species, namely Armascirus brasiliensis Den Heyer sp. nov., A. bahiaensis Den Heyer sp. nov., Dactyloscirus saopauloensis Den Heyer sp. nov. and Riscus austroamericanus Den Heyer sp. nov. are described and figured. A key to the new species, as well as the known species of Riscus, is provided.

New species of Fissiphallius Martens 1988 from Brazil and notes on the morphology of Fissiphalliidae (Arachnida, Opiliones)

The seventh species of Fissiphallidae, Fissiphallius orube sp. nov., and the fourth from Brazil (type locality state of Acre, Cruzeiro do Sul, at the Moa river), is described. The new species differs from the remaining species of the family in lacking a pergula, having a knob at the base of the rutrum, and the ocularium spiniform projection with apical portion single or divided in two to three parts.

New species of the Rhinella crucifer group (Anura, Bufonidae) from the Brazilian Cerrado

A new species of Rhinella of Central Brazil from the Rhinella crucifer group is described. Rhinella inopina sp. nov. is restricted to the disjunct Seasonal Tropical Dry Forests enclaves in the western Cerrado biome. The new species is characterized mainly by head wider than long, shape of parotoid gland, and oblique arrangement of the parotoid gland. Data on natural history and distribution are also presented.

Novos táxons e novos registros sobre Cerambycidae (Coleoptera) Neotropicais

Novos táxons e novos registros sobre Cerambycidae (Coleoptera) Neotropicais. Novos táxons descritos em Cerambycinae, Eligmodermini: Eligmoderma lara sp. nov. da Venezuela; Elaphidiini: Cratericus gen. nov., espécie-tipo, C. divaricatus sp. nov., da Jamaica. Em Lamiinae, Desmiphorini: Capillicornis gen. nov., espécie-tipo, C. basilaris sp. nov. do Equador; Cotycicuiara acuminata sp. nov. do Panamá; C. guiana sp. nov. da Guiana Francesa; Eupromerini: Puanama skillmani sp. nov. do Brasil (Rondônia). Novos registros são feitos para Temnopis martinezi Martins, 1995 (Oemini) e Estoloides (E.) aurantius Martins & Galileo, 2010 (Desmiphorini). A localidade-tipo de Hovorelus adiectus Galileo & Martins, 2010 (Prioninae, Anacolini) é corrigida e novos dados são acrescentados.

Novos táxons de Lamiinae (Coleoptera, Cerambycidae) da América do Sul

Novos táxons descritos: Acanthoderini, Nesozineus osorioensis sp. nov., do Brasil (Rio Grande do Sul); Calliini, Drycothaea clara sp. nov., do Brasil (Rondônia) e Drycothaea hovorei sp. nov., do Equador (Napo); Forsteriini, Itacolomi gen. nov., espécie-tipo I. letiziae sp. nov., do Brasil (Minas Gerais); Yapyguara gen. nov., espécie-tipo Y. fusca sp. nov., da Bolívia (Santa Cruz); Xenofreini, Xenofrea zischkai sp. nov., do Equador (Napo) e da Bolívia (Santa Cruz).

Phylogenetic analysis of Codium species from Brazil, with the description of the new species C. pernambucensis (Bryopsidales, Chlorophyta)

The genus Codium comprises c. 125 species widely distributed in marine coastal environments throughout the world. Due to morphological plasticity, the taxonomic delimitation of Codium species can be difficult. Sequences of the first exon of the large subunit of RUBISCO (rbcL) have been used in the molecular delimitation of species and for phylogenetic purposes. In the present study, we complement previous morphological work on Brazilian Codium species with molecular systematics. Based on the partial rbcL sequences, seven species are recognized along the Brazilian coast: C. decorticatum, C. intertextum, C. isthmocladum, C. profundum, C. spongiosum, C. taylorii and the new species Codium pernambucensis. Ten unique sequences were obtained among the samples examined, which we used in combination with previously published sequences to infer molecular phylogenies using various methods. The resulting trees showed three principal monophyletic groupings: Clade A with species having a prostrate habit, not branched, and mostly with small, grouped utricles; Clade B primarily consisting of upright species with cylindrical branches and large individual utricles; and Clade C composed of upright species with cylindrical branches that are slightly flattened, and have intermediate-sized individual utricles. The Brazilian species grouped with morphologically similar taxa from other geographic localities, and are present in all three main clades. A new sprawling species, Codium pernambucensis is described based on morphology and molecular analyses.

A new species of the Bokermannohyla circumdata group (Anura: Hylidae) from southeastern Brazil, with bioacoustic data on seven species of the genus

We describe a new species of the Bokermannohyla circumdata group from the Estacao de Pesquisa e Desenvolvimento Ambiental Galheiro (EPDA-Galheiro) (19 degrees 12'S; 47 degrees 08'W), Municipality of Perdizes, State of Minas Gerais, a mid-altitudinal (similar or equal to 850 m above sea level) riparian forest environment in the Cerrado of southeastern Brazil. Bokermannohyla napolii sp. nov. is allied to the large-sized species of the group, diagnosed on the basis of adult morphology/morphometrics, and mainly vocalizations. Adult specimens of the new species are most closely related to those of B. luctuosa and B. circumdata, but can be differentiated from the former by having distal subarticular tubercle of finger III bifid/divided in males, and finger IV bifid/divided in males and females; and from both B. luctuosa and B. circumdata by a distinctive advertisement call structure. We also provide bioacoustic data on seven other species of the genus, including previously unknown advertisement calls of B. circumdata and B. carvalhoi, and re-description of the advertisement calls of B. luctuosa, B. ibitiguara, B. nanuzae, B. sazimai, and B. hylax.

Shifts in phylogenetic diversity of archaeal communities in mangrove sediments at different sites and depths in southeastern Brazil

This study focused on the structure and composition of archaeal communities in sediments of tropical mangroves in order to obtain sufficient insight into two Brazilian sites from different locations (one pristine and another located in an urban area) and at different depth levels from the surface. Terminal restriction fragment length polymorphism (T-RFLP) of PCR-amplified 16S rRNA gene fragments was used to scan the archaeal community structure, and 16S rRNA gene clone libraries were used to determine the community composition. Redundancy analysis of T-RFLP patterns revealed differences in archaeal community structure according to location, depth and soil attributes. Parameters such as pH, organic matter, potassium and magnesium presented significant correlation with general community structure. Furthermore, phylogenetic analysis revealed a community composition distributed differently according to depth where, in shallow samples, 74.3% of sequences were affiliated with Euryarchaeota and 25.7% were shared between Crenarchaeota and Thaumarchaeota, while for the deeper samples, 24.3% of the sequences were affiliated with Euryarchaeota and 75.7% with Crenarchaeota and Thaumarchaeota. Archaeal diversity measurements based on 16S rRNA gene clone libraries decreased with increasing depth and there was a greater difference between depths (<18% of sequences shared) than sites (>25% of sequences shared). Taken together, our findings indicate that mangrove ecosystems support a diverse archaeal community; it might possibly be involved in nutrient cycles and are affected by sediment properties, depth and distinct locations. (C) 2012 Institut Pasteur. Published by Elsevier Masson SAS. All rights reserved.

Isolation and characterisation of aerobic endospore forming Bacilli from sugarcane rhizosphere for the selection of strains with agriculture potentialities

Eighteen aerobic endospore forming strains were isolated from sugarcane rhizosphere in N-free medium. A phenotypic description and analysis of the 5' end hypervariable region sequences of 16S rRNA revealed a high diversity of Bacillus and related genera. Isolates were identified, and four genera were obtained: seven strains belonged to Bacillus (Bacillaceae family), four belonged to Paenibacillus, six belonged to Brevibacillus and one strain was identified as Cohnella (Paenibacillaceae family). Four Brevibacillus strains showed in vitro inhibitory activity against plant pathogens fungi Curvularia and Fusarium. Seventy-four percent of the isolated bacteria grew on pectin as the only carbon source, showing polygalacturonase activity. Pectate lyase activity was detected for the first time in a Brevibacillus genus strain. All isolates showed endoglucanase activity. Calcium phosphate solubilisation was positive in 83.3% of the isolates, with higher values than those reported for Bacillus inorganic phosphate solubilising strains. High ethylene plant hormone secretion in the culture medium was detected in 22% of the bacteria. This is the first report of ethylene secretion in Paenibacillaceae isolates. Indole-3-acetic acid production was found in a Brevibacillus genus isolate. It was reported for the first time the presence of Cohnella genus strain on sugarcane rhizosphere bearing plant growth promoting traits. The sugarcane isolate Brevibacillus B65 was identified as a plant growth inoculant because it showed wider spectra of plant stimulation capabilities, including an antifungal effect, extracellular hydrolases secretion, inorganic phosphate solubilisation and plant hormone liberation. In this work, sugarcane was shown to be a suitable niche for finding aerobic endospore forming 'Bacilli' with agriculture biotechnological purposes.

A new ant species of Oxyepoecus (Hymenoptera: Formicidae: Myrmicinae), with the description of Oxyepoecus browni gyne and new records for the genus

We describe a new species of Oxyepoecus Santschi, 1926, Oxyepoecus regularis sp. nov., based on workers and a gyne collected in "Caatinga Arbórea" (Arboreal Shrubland) in Milagres and "Mata Seca" (Dry Forest) in Boa Vista do Tupim, both in the state of Bahia, Brazil. The gyne of Oxyepoecus browni Albuquerque & Brandão, 2004, collected in the same leaf litter ant survey, is also described. In addition, we present new records for Oxyepoecus species in Northeastern Brazil.

Nova espécie do gênero Galissus Dupont (Coleoptera, Cerambycidae) e chave para identificação das espécies

Galissus nigrescens sp. nov. é descrita da Costa Rica (Veragua Rainforest Reserve, Brisas de Veragua, Liverpool, Limón) e é fornecida chave para identificação das espécies.

Duas espécies de Onciderini (Cerambycidae, Lamiinae) do Institut Royal des Sciences Naturelles de Belgique, Bruxelas

Hypsioma brabanti sp. nov. de Trinidad and Tobagoé descrita e ilustrada. Novo registro (Trinidad and Tobago) para Leus ramuli (Bates, 1865) é apresentado.

Contribution towards the knowledge of Rhinotragini (Coleoptera, Cerambycidae). V. Reconsideration of Rhopalessa rubroscutellaris (Tippmann, 1960)

Corrections to the revision of Rhopalessa Bates, 1873 (Clarke et al. 2011), with the transfer of two species to a new genus, Rashelapso: R. durantoni (Peñaherrera-Leiva & Tavakilian, 2004) comb. nov., and R. schmidi sp. nov. (previously considered to be conspecific with Ommata (Rhopalessa) rubroscutellaris Tippmann, 1960 by the authors). Ommata (Rhopalessa) rubroscutellaris is now considered a junior synonym of Laedorcari fulvicollis (Lacordaire, 1868).