Interstitial water chemsitry at DSDP Leg 60 Holes

Interstitial water data obtained during Leg 60 show complex gradients at Site 453 in a sediment pond on the west side of the Mariana Trough. Concentrations of Ca, Mg, Sr, as well as of K and Li, suggest that slightly altered sea water penetrates below the sediments, most likely through brecciated igneous and metamorphic rocks, mainly gabbros, lying at the base of the pond. Interstitial water concentration gradients suggest that reactions involving igneous matter lead to increases in calcium and strontium in the pore fluids and to decreases in magnesium. Upward advection of water through the sediments does not appear to occur, so that the advected sea water most likely penetrates deeper into the breccias, perhaps leading to further hydrothermal activity elsewhere in this area. Interstitial water gradients at Sites 458 (conservative) and 459 suggest that reactions in the sediments and underlying basalts are responsible for increases in dissolved calcium and decreases in magnesium and potassium.

Sedimentology of cores from the shelf of Lazarev Sea, East Antarctica

Distinct facies types, classified in radiocarbon-dated sediments from the shelf of the Lazarev Sea, East Antarctica, reveal a detailed history of processes that have controlled sedimentation during the deglaciation over the last 10,000 yr. The ice retreat on this part of the Antarctic shelf started 9500 yr BP, marked by the deposition of laminated sediments, deposited from a floating ice shelf. These laminites, which occur on top of diamictons laid down from a grounded ice sheet, are the basal sediments of the postglacial sequence. The intensity of the Antarctic Coastal Current (ACC), directed by shelf morphology, controlled sedimentation of the postglacial facies. A residual glaciomarine sediment with the fine fraction winnowed by strong currents developed from 9000-8000 yr BP in the western part of the investigation area and from 9000-5000 yr BP in the eastern part, closer to the prominent 'Fenno Deep' trough. Current velocities apparently decreased between 8000 and 2000 yr BP due to a deflection of the ACC by advancing ice tongues to the east of the investigation area during the 'Hypsithermal'. This led to a deposition of fine-grained sediments, and clay mineralogy suggests a continental source, possibly near the grounding line of the Nivl Ice Shelf, rather than a winnowing of sediments near the shelf break or advection from deeper water. Current velocities intensified after 2000 yr BP, removed fine material from these sediments and led to a relict sediment, consisting of coarse bryozoan and molluscan debris.

An observational and theoretical study of the structure and propagation of the Madden-Julian Oscillation

Thesis (Ph.D.)--University of Washington, 2016-06

Comparison of Lagrangian Coherent Structures and Relative Dispersion in a Mixing Layer

Thesis (Master's)--University of Washington, 2016-06

Modelling the fate of chromated copper arsenate in a sandy soil

A pulse of chromated copper arsenate (CCA, a timber preservative) was applied in irrigation water to an undisturbed field soil in a laboratory column. Concentrations of various elements in the leachate from the column were measured during the experiment. Also, the remnants within the soil were measured at the end of the experiment. The geochemical modelling package, PHREEQC-2, was used to simulate the experimental data. Processes included in the CCA transport modelling were advection, dispersion, non-specific adsorption (cation exchange) and specific adsorption by clay minerals and organic matter, as well as other possible chemical reactions such as precipitation/dissolution. The modelling effort highlighted the possible complexities in CCA transport and reaction experiments. For example, the uneven dosing of CCA as well as incomplete knowledge of the soil properties resulted in simulations that gave only partial, although reasonable, agreement with the experimental data. Both the experimental data and simulations show that As and Cu are strongly adsorbed and therefore, will mostly remain at the top of the soil profile, with a small proportion appearing in leachate. On the other hand, Cr is more mobile and thus it is present in the soil column leachate. Further simulations show that both the quantity of CCA added to the soil and the pH of the irrigation water will influence CCA transport. Simulations suggest that application of larger doses of CCA to the soil will result in higher leachate concentrations, especially for Cu and As. Irrigation water with a lower pH will dramatically increase leaching of Cu. These results indicate that acidic rainfall or significant accidental spillage of CCA will increase the risk of groundwater pollution.

Atmospheric boundary layer development over a narrow coastal plain during onshore flow

A study of the structure of the daytime atmospheric boundary layer during onshore flow over a narrow coastal plain is presented. The main emphasis of the study is on the nature and causes of heating and cooling observed in the boundary layer temperature profiles. Measurements included vertical temperature profiles above at least two sites derived from radiosondes and aircraft, as well as surface estimates of radiative and sensible heat fluxes. Surface meteorological and pilot balloon data were also available, providing further evidence of short-term changes in atmospheric boundary layer structure. The Manawatu case was representative of autumnal anticyclonic conditions with weak pressure gradients, and illustrated typical diurnal development of a convective boundary layer over a coastal plain bordered by mountain ranges, with a transition from a stable nocturnal situation to a well-mixed profile in the afternoon. The profiles show surface input of heat propagating upwards through the boundary layer during the day, as well as entrainment of heat at the top associated with shear induced turbulence and/or penetrative convection. Applying a one-dimensional model, estimates of boundary layer heat budget components were obtained for four time periods during the day. Later periods were affected by cumulus cloud development at the top of the boundary layer, resulting in significant changes in individual components. Input of sensible heat from the surface decreased, while the addition of heat to the boundary layer from both cloud condensation and advection increased.

Spatial patterns of aerobic and anaerobic mineralization rates and oxygen penetration dynamics in coral reef sediments

Oxygen consumption rates (OCR), aerobic mineralization and sulfate reduction rates (SRR) were studied in the permeable carbonate reef sediments of Heron Reef, Australia. We selected 4 stations with different hydrodynamic regimes for this study. In situ oxygen penetration into the sediments was measured with an autonomous microsensor profiler. Areal OCR were quantified from the measured oxygen penetration depth and volumetric OCR. Oxygen penetration and dynamics (median penetration depths at the 4 stations ranged between 0.3 and 2.2 cm), OCR (median 57 to 196 mmol C m(-2) d(-1)), aerobic mineralization (median 24 to 176 mmol C m(-2) d(-1)) and SRR (median 9 to 42 mmol C m(-2) d(-1)) were highly variable between sites. The supply of oxygen by pore water advection was a major cause for high mineralization rates by stimulating aerobic mineralization at all sites. However, estimated bottom water filtration rates could not explain the differences in volumetric OCR and SRR between the 4 stations. This suggests that local mineralization rates are additionally controlled by factors other than current driven pore water advection, e.g. by the distribution of the benthic fauna or by local differences in labile organic carbon supply from sources such as benthic photosynthesis. Carbon mineralization rates were among the highest reported for coral reef sediments, stressing the role of these sediments in the functioning of the reef ecosystem.

Tidal impacts on riparian salinities near estuaries

Groundwater-dependent riparian biota is known to be sensitive to changes in soil and groundwater salinity in estuarine systems. The groundwater flow and salinity behaviour in a phreatic aquifer adjoining a partially penetrating, tidal. estuary is investigated through two-dimensional numerical experiments for a lateral cross-section, which explore the influence of factors, such as aquifer and soil materials, tidal amptitudes, and regional groundwater hydraulic gradients. The density contrast between estuarine water and the fresh groundwater drives saltwater penetration of the aquifer even in the case of a marked groundwater hydraulic gradient towards the estuary. We show that tidal fluctuations in estuaries can significantly affect the groundwater salinity distribution in adjacent density-stratified phreatic aquifers. This has consequences for the expected distribution of salinity-sensitive biota in the hyporheic zone as well as vegetation and fauna dependent on water in the riparian soil and aquifer. The shape of the dense saltwater wedge propagating into the adjacent groundwater system is also modified by the estuarine tidal signal, although this effect appears to have only minor influence on the maximum distance penetrated into the aquifer (i.e., location of the 'toe' of the wedge). Tide-induced changes to riparian groundwater salinity are advection-driven, as evidenced by the modified time-averaged groundwater flow dynamics. (c) 2006 Elsevier B.V. All rights reserved.

Data assimilation for precipitation nowcasting using Bayesian inference

This work introduces a new variational Bayes data assimilation method for the stochastic estimation of precipitation dynamics using radar observations for short term probabilistic forecasting (nowcasting). A previously developed spatial rainfall model based on the decomposition of the observed precipitation field using a basis function expansion captures the precipitation intensity from radar images as a set of ‘rain cells’. The prior distributions for the basis function parameters are carefully chosen to have a conjugate structure for the precipitation field model to allow a novel variational Bayes method to be applied to estimate the posterior distributions in closed form, based on solving an optimisation problem, in a spirit similar to 3D VAR analysis, but seeking approximations to the posterior distribution rather than simply the most probable state. A hierarchical Kalman filter is used to estimate the advection field based on the assimilated precipitation fields at two times. The model is applied to tracking precipitation dynamics in a realistic setting, using UK Met Office radar data from both a summer convective event and a winter frontal event. The performance of the model is assessed both traditionally and using probabilistic measures of fit based on ROC curves. The model is shown to provide very good assimilation characteristics, and promising forecast skill. Improvements to the forecasting scheme are discussed

Development of a novel magnetic resonance imaging contrast agent for pressure measurements using lipid-coated microbubbles

The aim of this study was to prepare gas-filled lipid-coated microbubbles as potential MRI contrast agents for imaging of fluid pressure. Air-filled microbubbles were produced with phospholipid 1,2-distearoyl-sn-glycero-3-phosphocholine (DSPC) in the presence or absence of cholesterol and/or polyethylene-glycol distearate (PEG-distearate). Microbubbles were also prepared containing a fluorinated phospholipid, perfluoroalkylated glycerol-phosphatidylcholine, F-GPC shells encompassing perfluorohexane-saturated nitrogen gas. These microbubbles were evaluated in terms of physico-chemical characteristics such as size and stability. In parallel to these studies, DSPC microbubbles were also formulated containing nitrogen (N2) gas and compared to air-filled microbubbles. By preventing advection, signal drifts were used to assess their stability. DSPC microbubbles were found to have a drift of 20% signal change per bar of applied pressure in contrast to the F-GPC microbubbles which are considerably more stable with a lower drift of 5% signal change per bar of applied pressure. By increasing the pressure of the system and monitoring the MR signal intensity, the point at which the majority of the microbubbles have been damaged was determined. For the DSPC microbubbles this occurs at 1.3 bar whilst the F-GPC microbubbles withstand pressures up to 2.6 bar. For the comparison between air-filled and N2-filled microbubbles, the MRI sensitivity is assessed by cycling the pressure of the system and monitoring the MR signal intensity. It was found that the sensitivity exhibited by the N2-filled microbubbles remained constant, whilst the air-filled microbubbles demonstrated a continuous drop in sensitivity due to continuous bubble damage.

A Bayesian state space modelling approach to probabilistic quantitative precipitation forecasting

The generation of very short range forecasts of precipitation in the 0-6 h time window is traditionally referred to as nowcasting. Most existing nowcasting systems essentially extrapolate radar observations in some manner, however, very few systems account for the uncertainties involved. Thus deterministic forecast are produced, which have a limited use when decisions must be made, since they have no measure of confidence or spread of the forecast. This paper develops a Bayesian state space modelling framework for quantitative precipitation nowcasting which is probabilistic from conception. The model treats the observations (radar) as noisy realisations of the underlying true precipitation process, recognising that this process can never be completely known, and thus must be represented probabilistically. In the model presented here the dynamics of the precipitation are dominated by advection, so this is a probabilistic extrapolation forecast. The model is designed in such a way as to minimise the computational burden, while maintaining a full, joint representation of the probability density function of the precipitation process. The update and evolution equations avoid the need to sample, thus only one model needs be run as opposed to the more traditional ensemble route. It is shown that the model works well on both simulated and real data, but that further work is required before the model can be used operationally. © 2004 Elsevier B.V. All rights reserved.

Mean zonal flows generated by librations of a rotating spherical cavity

Longitudinal librations represent oscillations about the axis of a rotating axisymmetric fluid-filled cavity. An analytical theory is developed for the case of a spherical cavity in the limit when the libration frequency is small in comparison with the rotation rate, but large in comparison with the inverse of the spin-up time. It is shown that longitudinal librations create a steady zonal flow through the nonlinear advection in the Ekman layers. The theory can be applied to laboratory experiments as well as to solid planets and satellites with a liquid core. Copyright © Cambridge University Press 2010.

Zonal flow induced by longitudinal librations of a rotating cylindrical cavity

Longitudinal librations represent oscillations about the axis of a rotating axisymmetric fluid filled cavity. An analytical theory is developed for the case of a cylindrical cavity in the limit when the libration frequency is small in comparison with the rotation rate, but large in comparison with the inverse of the spin-up time. It is shown that through the nonlinear advection in the Ekman layers the librations cause the fluid to rotate more slowly. © 2010 Elsevier B.V. All rights reserved.

Microfluidic-controlled manufacture of liposomes for the solubilisation of a poorly water soluble drug

Besides their well-described use as delivery systems for water-soluble drugs, liposomes have the ability to act as a solubilizing agent for drugs with low aqueous solubility. However, a key limitation in exploiting liposome technology is the availability of scalable, low-cost production methods for the preparation of liposomes. Here we describe a new method, using microfluidics, to prepare liposomal solubilising systems which can incorporate low solubility drugs (in this case propofol). The setup, based on a chaotic advection micromixer, showed high drug loading (41 mol%) of propofol as well as the ability to manufacture vesicles with at prescribed sizes (between 50 and 450 nm) in a high-throughput setting. Our results demonstrate the ability of merging liposome manufacturing and drug encapsulation in a single process step, leading to an overall reduced process time. These studies emphasise the flexibility and ease of applying lab-on-a-chip microfluidics for the solubilisation of poorly water-soluble drugs.

Monte Carlo Study of Particle Transport Problem in Air Pollution

2002 Mathematics Subject Classification: 65C05.