JC polyomavirus infection in candidates for kidney transplantation living in the Brazilian Amazon Region

This study evaluated the relative occurrences of BK virus (BKV) and JC virus (JCV) infections in patients with chronic kidney disease (CKD). Urine samples were analysed from CKD patients and from 99 patients without CKD as a control. A total of 100 urine samples were analysed from the experimental (CKD patients) group and 99 from the control group. Following DNA extraction, polymerase chain reaction (PCR) was used to amplify a 173 bp region of the gene encoding the T antigen of the BKV and JCV. JCV and BKV infections were differentiated based on the enzymatic digestion of the amplified products using BamHI endonuclease. The results indicated that none of the patients in either group was infected with the BKV, whereas 11.1% (11/99) of the control group subjects and 4% (4/100) of the kidney patients were infected with the JCV. High levels of urea in the excreted urine, low urinary cellularity, reduced bladder washout and a delay in analysing the samples may have contributed to the low prevalence of infection. The results indicate that there is a need to increase the sensitivity of assays used to detect viruses in patients with CDK, especially given that polyomavirus infections, especially BKV, can lead to a loss of kidney function following transplantation.

Identification of duplicates of cassava accessions sampled on the North Region of Brazil using microsatellite markers

Duplicatas costumam ocorrer em bancos de germoplasma e a sua identificação é necessária para facilitar o manejo dos bancos ativos de germoplasma (BAGs) e diminuir custos de manutenção. O objetivo deste trabalho foi identificar duplicatas de mandioca determinadas previamente pela caracterização morfo-agronômica, em um BAG da Amazônia Oriental. Foram selecionados 36 acessos que se agrupavam em 13 grupos de similaridade morfo-agronômica para serem genotipados com 15 locos microssatélites. Todos os locos foram polimórficos, sendo obtidos 75 alelos, com média de cinco alelos por loco e H_E = 0,66. Foram encontrados 34 pares de genótipos que apresentaram perfis multilocos idênticos e a probabilidade de identidade genética foi de 1,1x10^-12 com probabilidade de exclusão de 99,9999%. Entre essas duplicatas, estão materiais coletados em épocas e locais diferentes, e com diferentes denominações e acessos com o mesmo nome coletados em diferentes locais e anos. O estudo identificou genótipos que vem sendo cultivados em diferentes locais e que vêm sendo mantidos pelos agricultores ao longo dos anos.

Diversidade genética de Rhizoctonia spp. e análise de sequência multilocos

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Clonagem e expressão de fragmentos de anticorpos (scFV) contra o vírus da leucemia felina (FeLV) por phage display

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Leveduras isoladas de ninhos de Acromyrmex Balzani (Hymenoptera: Formicidade) de áreas de cerrado do Estado do Tocantins

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

The role of B-mode ultrasonography in the musculoskeletal anatomical evaluation of the cervical region of the dog spine

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Characterization of the Exonic Regions of the JY-1 Gene in Zebu Cattle and Buffaloes

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Identification and sequence analysis of five allexiviruses species infecting garlic crops in Brazil

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Sex chromosome composition revealed in Characidium fishes (Characiformes: Crenuchidae) by molecular cytogenetic methods

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Prevalência da excreção e caracterização molecular do poliomavírus humano JC em amostras de urina de pacientes com aids sem leucoencefalopatia multifocal pro-gressiva

The human poliomavirus is the etiologic agente of Progressive multifocal leukoencephalopathy (PML), a disease characterized by focal lesions not expansives of the central nervous system that develops in imunocompromissed patients, specially people with aids. The main aim of the study was to evalute the prevalence of the JCV excretion in urine samples of patients with aids, without PML, to compare two JCV DNA detection techniques through of two diferents genomic regions and to evaluate the genotypic characterization of the positive samples. A total of 75 samples were colected in the Instituto de Infectologia Emílio Ribas, in Sao Paulo, Brazil, between may and november, 2009. To detect the JC virus it was made the DNA extraction and then the polimerase chain reaction (PCR). Firstly a fragment of 215 bp was amplified, which corresponds to the codifying gene of the strutural protein of de JC vírus capsid VP1. All the samples were later submitted to another PCR that uses a pair of primers complementaries to the early region of the JCV (T antigen) amplifying a fragment of 173 bp. Followed by the digestion of the amplified product with the restriction enzime BamH1, resulting in two smaller fragments (120 bp and 53 bp). The JC vírus was detected in 53 samples, for both techniques (70,7% for VP1 PCR, and the restriction enzime BamH1), 34/46 were men (73,9%) and 19/29 were women (65,5%). The JCV excretion was higher in individuals that were over 46 years old. Regarding the seven genotypes described in the literature, the ones that were more prevalent among the JC positive patients were 3B and 3A with 10 samples each (21,0%), the 2B with 9 samples (19,0%) and genotype 6, with six samples (13,0%). As in the brown patients as the white ones, the most prevalent genotype was 3B. In the present study it was observed a high prevalence of JCV DNA (70,7%) and the genotype 3 (43,0%)... (Complete abstract click electronic access below)

Estudo da inflexão da Serra do Garrote e sua influência na zona de falha de Vazante (MG)

The Vazante Fault Zone (VFZ), located northwestward of Minas Gerais, host the largest zinc deposit known in the Brazilian territory. This structure is hosted in Vazante’s Group rocks, a metassedimentary sequence of marine environment. Near Vazante is situated the south end of the VFZ. To the west, occur the Serra do Garrote inflexion, characterized by a curvature in the contact of Formations Serra do Garrote and Serra do Poço Verde. This structure is through the analysis of aerial imagery of the region and represented in the published geological maps. The objective of this work is to understand what causes this inflexion and determine whether it affects the VZF, causing a shift in the same, and possibly, in the mineralization as well. To this end, it was done a mapping work in the region covering the Serra do Garrote inflexion and the south end of the VFZ, in 1:25.000 scale, supplemented by petrographic description of thin section and geologic sections, with cooperated to the understanding of the structural evolution of the region. Data analysis allowed the identification of six deformation phases. The D1 an D2 phases generated the main foliation. The D3 phase generate kink bands folds, with NS axis and vertical axial plane. The fourth phase is responsible for generating the Vazante Fault Zone. The fifth phase produces low angle folds and shear zones, subparallel to S1//S2. The last phase generates folds with NW axis and vertical axial plane, with causes the inflection of lithologic contactas. Field observations also make possible the conclusion that the Vazante Fault Zone presents a south continuation, which is affected by deformation associated to D6 phase attributing to the trace of the VFZ a curved geometry, similar to that exhibited by lithologic contacts between units of the map

Caracterização estrutural da mineralização da mina de Fazenda Nova - GO

The study area is includes in the geological context of Arenópolis Magmatic Arc, a region where there are neoproterozoic associations of granodioritic and tonalitic composiotion. (Ortogneisses of the western Goiás) and sequences metavolcanic-sedimentary (Jaupaci Metavolcanic-sedimentary Sequence ). In the mapped area, both units are covered by a cover-laterite. The Ortogneisses from Goiás West consist of a source granodioritic gneisses, corresponding to the Biotite granodiorite gneisse, and also by tonalitic gneiss composition corresponding to Metatonalit. The Jaupaci Metavolcanic-sedimentary Sequence is formed by Chlorite Schist (Metabasalt), Biotite Schist (Metadacite) and Sericite Schist (Metarhyolite), and even intrusions Sin/Tardi e Post Tectonic, granite to diorite composition (Diorites), and alson tonalitic (Bacilandia Tonalite). Post tectonic intrusions are observed, wich were Hornblend Diorite Porphyry and Lamprophyres, Structural analysis allowed the identification of three deformational events, Dn-1, Dn and Post-Dn. The first event is associated with a bygone foliation, lineation which generates an intersectional event, generating the foliation Sn, this being the most important structure in the study area, generating even the type mineral lineation and stretch. The last deformational event is characterized by folds on different scales, affecting the Sn foliation. The rocks of the region have features s active hydrothermal and regional metamorphism, and are composed os assembly indicative of mineralogical facies metamorphism Green Schist, in chlotite zone, with evidence of retro metamorphism. Locally there are sulfides as pyrite, arsenopyrit and pyrhotite, and te mineralization is associated with the arsenopyrite

Ocorrência de infecção por Leishmania sp. em cães no município de Florianópolis, Santa Catarina

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Tailoring the refractive index of Ge-S based glass for 3D embedded waveguides operating in the mid-IR region

The photosensitivity of GeSx binary glasses in response to irradiation to femtosecond pulses at 800 nm is investigated. Samples with three different molecular compositions were irradiated under different exposure conditions. The material response to laser exposure was characterized by both refractometry and micro-Raman spectroscopy. It is shown that the relative content of sulfur in the glass matrix influences the photo-induced refractive index modification. At low sulfur content, both positive and negative index changes can be obtained while at high sulfur content, only a positive index change can be reached. These changes were correlated with variations in the Raman response of exposed glass which were interpreted in terms of structural modifications of the glass network. Under optimized exposure conditions, waveguides with positive index changes of up to 7.8x10−3 and a controllable diameter from 14 to 25 μm can be obtained. Direct inscription of low insertion losses (IL = 3.1 – 3.9 dB) waveguides is demonstrated in a sample characterized by a S/Ge ratio of 4. The current results open a pathway towards the use of Ge-S binary glasses for the fabrication of integrated mid-infrared photonic components.

Molecular characterisation of Cryptosporidium spp. in lambs in the south central region of the State of São Paulo

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)