Physical properties and bulk minerals from IODP Holes 308-U1322B, U1322D and U1324B

How the micro-scale fabric of clay-rich mudstone evolves during consolidation in early burial is critical to how they are interpreted in the deeper portions of sedimentary basins. Core samples from the Integrated Ocean Drilling Program Expedition 308, Ursa Basin, Gulf of Mexico, covering seafloor to 600 meters below sea floor (mbsf) are ideal for studying the micro-scale fabric of mudstones. Mudstones of consistent composition and grain size decrease in porosity from 80% at the seafloor to 37% at 600 mbsf. Argon-ion milling produces flat surfaces to image this pore evolution over a vertical effective stress range of 0.25 (71 mbsf) to 4.05 MPa (597 mbsf). With increasing burial, pores become elongated, mean pore size decreases, and there is preferential loss of the largest pores. There is a small increase in clay mineral preferred orientation as recorded by high resolution X-ray goniometry with burial.

Sedimentology on sediment cores from the eastern Weddell Sea, Antarctica

Sediment cores from nine sites along a profile on the Antarctic continental margin off Kapp Norvegia were analysed sedimentologicaly. The carbonate and organic carbon content, grain size distribution, composition of the coarse fraction and clay minerals were determined. d18O- and d13C-isotope ratios were also measured. The distribution of ice rafted debris was determined by a new method. Sedimentation-rates were obtained from 230Th- and 14C-analyses. A segregation into seven different sediment facies was made possible by different sedimentological parameters, which can be attributed to different sedimentation environments and conditions. Thr profile can be divided morphologicaly into shelf, upper continental slope, slope terrace and lower continental slope. The paratill facies is deposited on the shelf during an interglacial phase and consists mainly of ice rafted sediments. A portion of the fine fraction is being carried away by the antarctic coastel current. The sedimentation rate lies between 0 and 3 cm/1000 a. The coarse grained deposits of the upper, relatively steep continental slope, were specified as a rest sediment. Current and gravity sediment transport are responsible for the intensive sorting of ice rafted material coming from the shelf. The fine sediment is carried away by currents while sand and silt are deposited as small turbidites on the slope terrace. The morainic facies only appears at the base of the upper continental slope and defines ice advances, beyond the shelf margin. The facies mainly consists of transported shelf sediments. The interglacial facies, deposited during the interglacial phases on the continental slope, are characterized by high proportions of ice raft, coarse mean grain size, low content of montmorillonite and a carbonate content, which mainly originates from planktonic foraminifera (N. pachyderma). At the central part of the slope the sedimentation rate is at its lowest (2 cm/1000 a) and increases to 3-4 cm/1000 a towards the sea, due to high production of biogenic components and towards the continent due to an increasing input of terrigenous material. Sedimentary conditions during glacial times are depicted in the glacial facies by a low content of ice rafted debris, a lower mean grain size and a high content of montmorillonite. Biogeneous components are absent. The sedimentation rate is generally about 1 cm/1000a. A transition facies is deposited during the transition from glacial to interglacial conditions. Typical for this facies, with a terrigenous composition similar to the interglacial facies, is a high content of radiolaria. The reason for the change of plankton from a siliceous to a carbonacous fauna may have been the changing hydrography caused by the sea ice. The surge facies is deposited at the continental margin under the ice shelf and is a sediment exclusively delivered by currents. With the aid of this facies it was, for the first time possible to prove the existence of Antarctic ice surges, an aspect wh ich has been discussed for the past 20 years.

Chemical and mineral compositions of basalts from the Pacific Ocean, DSDP data

Mineral and chemical alterations of basalts were studied in the upper part of the ocean crust using data of deep-sea drilling from D/S Glomar Challenger in the main structures of the Pacific floor. Extraction of majority of chemical elements (including heavy metals) from basalts results mainly from their interaction with heated sea water. As a result mineralized hydrothermal solutions are formed. On entering the ocean they influence greatly on ocean sedimentation and ore formation.

Petrology and isotope characteristics of basalts from ODP Hole 111-504B

Petrography and isotope geochemical characteristics of H, O, S, Sr, and Nd have been described for basalts recovered from Hole 504B during Leg 111 of the Ocean Drilling Program. The petrographic and chemical features of the recovered basalts are similar to those obtained previously (DSDP Legs 69, 70, and 83); they can be divided into phyric (plagioclase-rich) and aphyric (Plagioclase- and clinopyroxene-rich) basalts and show low abundances of TiO2, Na2O, K2O, and Sr. This indicates that the basalts belong to Group D, comprising the majority of the upper section of the Hole 504B. The diopside-rich nature of the clinopyroxene phenocrysts and Ca-rich nature of the Plagioclase phenocrysts are also consistent with the preceding statement. The Sr and Nd isotope systematics (average 87Sr/86Sr = 0.70267 ± 0.00007 and average 143Nd/144Nd = 0.513157 ± 0.000041) indicate that the magma sources are isotopically heterogeneous, although the analyzed samples represent only the lowermost 200-m section of Hole 504B. The rocks were subjected to moderate hydrothermal alteration throughout the section recovered during Leg 111. Alteration is limited to interstices, microfractures, and grain boundaries of the primary minerals, forming chlorite, actinolite, talc, smectite, quartz, sphene, and pyrite. In harmony with the moderate alteration, the following alteration-sensitive parameters show rather limited ranges of variation: H2O = 1.1 ±0.2 wt%, dD = - 38 per mil ± 4 per mil, d180 = 5.4 per mil ± 0.3 per mil, total S = 562 ± 181 ppm, and d34S = 0.8 per mil ± 0.3 per mil. Based on these data, it was estimated that the hydrothermal fluids had dD and d180 values only slightly higher than those of seawater, the water/rock ratios were as low as 0.02-0.2, and the temperature of alteration was 300°-400°C. Sulfur exists predominantly as pyrite and in minor quantities as chalcopyrite. No primary monosulfide was detected. This and the d34S values of pyrite (d34S = 0.8 per mil) suggest that primary pyrrhotite was almost completely oxidized to pyrite by reaction with hydrothermal fluids containing very little sulfate.

Mineralogy and geochemistry of Mg-phyllosilicates from Middle Valley, northern Juan de Fuca Ridge

We present results of a detailed mineralogical and geochemical study of the progressive hydrothermal alteration of clastic sediments recovered at ODP Site 858 in an area of active hydrothermal venting at the sedimented, axial rift valley of Middle Valley (northern Juan de Fuca Ridge). These results allow a characterization of newly formed phyllosilicates and provide constraints on the mechanisms of clay formation and controls of mineral reactions on the chemical and isotopic composition of hydrothermal fluids. Hydrothermal alteration at Site 858 is characterized by a progressive change in phyllosilicate assemblages with depth. In the immediate vent area, at Hole 858B, detrital layers are intercalated with pure hydrothermal precipitates at the top of the section, with a predominance of hydrothermal phases at depth. Sequentially downhole in Hole 858B, the clay fraction of the pure hydrothermal layers changes from smectite to corrensite to swelling chlorite and finally to chlorite. In three pure hydrothermal layers in the deepest part of Hole 858B, the clay minerals coexist with neoformed quartz. Neoformed and detrital components are clearly distinguished on the basis of morphology, as seen by SEM and TEM, and by their chemical and stable isotope compositions. Corrensite is characterized by a 24 Å stacking sequence and high Si- and Mg-contents, with Fe/(Fe+Mg) ratio of = 0.08. We propose that corrensite is a unique, possibly metastable, mineralogical phase and was precipitated directly from seawater-dominated hydrothermal fluids. Hydrothermal chlorite in Hole 858B has a stacking sequence of 14 Å with Fe/(Fe+Mg) ratios of ? 0.35. The chemistry and structure of swelling chlorite suggest that it is a corrensiteychlorite mixed-layer phase. The mineralogical zonation in Hole 858B is accompanied by a systematic decrease in d18O, reflecting both the high thermal gradients that prevail at Site 858 and extensive sediment-fluid interaction. Precipitation of the Mg-phyllosilicates in the vent region directly controls the chemical and isotopic compositions of the pore fluids. This is particularly evident by decreases in Mg and enrichments in deuterium and salinity in the pore fluids at depths at which corrensite and chlorite are formed. Structural formulae calculated from TEM-EDX analyses were used to construct clay-H2O oxygen isotope fractionation curves based on oxygen bond models. Our results suggest isotopic disequilibrium conditions for corrensite-quartz and swelling chlorite-quartz precipitation, but yield an equilibrium temperature of 300° C ± 30° for chlorite-quartz at 32 m below the surface. This estimate is consistent with independent estimates and indicates steep thermal gradients of 10-11°/m in the vent region.

Chemistry of hydrothermal clasy and sulfides of ODP Site 106-649

Several meters of unconsolidated hydrothermal sediment were recovered from the Snake Pit hydrothermal field during ODP Leg 106. Polymetallic sulfides comprise most of the sediment with minor fragments of massive sulfide, organic debris, clay minerals, and fresh glass shards. Trace element and Sr-isotope contents of hydrothermal clays and sulfides from Holes 649B and 649G indicate that these minerals precipitated from a mixed hydrothermal fluid-seawater solution. Evaluation of the REE mineral data and the Snake Pit hydrothermal fluids shows that the REE distribution coefficients between the hydrothermal fluids and clay-sulfide mixes range from 100-500. This indicates that hydrothermal fluids originating in the root-zone of the Snake Pit hydrothermal system may be modified by the precipitation of hydrothermal minerals, either in the shallow subsurface or within chimney structures. Contrasting REE profiles of clay-sulfide aggregates and massive sulfides from Holes 649B and 649G may be accounted for by spatial and/or temporal variations in redox conditions in the plumbing system.

Geochemistry and mineralogy of ultramafic rocks from conical seamount

The Mariana arc-trench system, the easternmost of a series of backarc basins and intervening remnant arcs that form the eastern edge of the Philippine Sea Plate, is a well-known example of an intraoceanic convergence zone. Its evolution has been studied by numerous investigators over nearly two decades (e.g., Kang, 1971; Uyeda and Kanamori, 1979; LaTraille and Hussong, 1980; Fryer and Hussong, 1981; Mrosowski et al., 1982; Hussong and Uyeda, 1981; Bloomer and Hawkins, 1983; Karig and Ranken, 1983; McCabe and Uyeda, 1983; Hsui and Youngquist, 1985; Fryer and Fryer, 1987; Johnson and Fryer, 1988; Johnson and Fryer, 1989; Johnson et al., 1991). The Mariana forearc has undergone extensive vertical uplift and subsidence in response to seamount collision, to tensional and rotational fracturing associated with adjustments to plate subduction, and to changes in the configuration of the arc (Hussong and Uyeda, 1981; Fryer et al., 1985). Serpentine seamounts, up to 2500 m high and 30 km in diameter, occur in a broad zone along the outer-arc high (Fryer et al., 1985; Fryer and Fryer, 1987). These seamounts may be horsts of serpentinized ultramafic rocks or may have been formed by the extrusion of serpentine muds. Conical Seamount, one of these serpentine seamounts, is located within this broad zone of forearc seamounts, about 80 km from the trench axis, at about 19°30'N. The seamount is approximately 20 km in diameter and rises 1500 m above the surrounding seafloor. Alvin submersible, R/V Sonne bottom photography, seismic reflection, and SeaMARC II studies indicate that the surface of this seamount is composed of unconsolidated serpentine muds that contain clasts of serpentinized ultramafic and metamorphosed mafic rocks, and authigenic carbonate and silicate minerals (Saboda et al., 1987; Haggerty, 1987; Fryer et al., 1990; Saboda, 1991). During Leg 125, three sites were drilled (two flank sites and one summit site) on Conical Seamount to investigate the origin and evolution of the seamount. Site 778 (19°29.93'N, 146°39.94'E) is located in the midflank region of the southern quadrant of Conical Seamount at a depth of 3913.7 meters below sea level (mbsl) (Fig. 2). This site is located in the center of a major region of serpentine flows (Fryer et al., 1985, 1990). Site 779 (19°30.75'N, 146°41.75'E), about 3.5 km northeast of Site 778, is located approximately in the midflank region of the southeast quadrant of Conical Seamount, at a depth of 3947.2 mbsl. This area is mantled by a pelagic sediment cover, overlying exposures of unconsolidated serpentine muds that contain serpentinized clasts of mafic and ultramafic rocks (Fryer et al., 1985, 1990). Site 780 (19°32.5'N, 146°39.2'E) is located on the western side of Conical Seamount near the summit, at a depth of 3083.4 mbsl. This area is only partly sediment covered and lies near active venting fields where chimney structures are forming (Fryer et al., 1990).

Mineral and chemical compositions of clay sediments from the Pacific Ocean, DSDP data

Mineral and chemical compositions, as well as conditions of formation of clay sediments in major structural elements of the Pacific Ocean floor with different ages are under consideration in the monograph. Depending on evolution of the region two ways of clay sediment formation are identified: terrigenous and authigenic. It is shown that terrigenous clay sediments predominate in marginal parts of the Pacific Ocean. Authigenic mineral formation occurring in the basal part of the sedimentary cover primarily results from removal of material from underlying basalts. This material is released during secondary alteration of the basalts due to their interaction with sea water, as well as with deep solutions.

Minerals and geochemistry abundance and occurance, as well as K-Ar determinations for DSDP Site 92-597 basalts

Preliminary studies of hydrothermally altered massive basalts formed at the fast-spreading Mendoza Rise and recovered from DSDP Holes 597B and 597C indicate the presence of three secondary mineral assemblages which formed in the following order: (1) trioctahedral chlorite and talc, (2) goethite and smectite, and (3) calcite and celadonite. The sequential precipitation of these mineral assemblages denotes high water:rock ratios and time-varying conditions of temperature (early >200°C to late <30°C) and state of oxidation (early nonoxidative to late oxidative). A decrease in the relative proportion of oxidative mineral assemblages with depth to 70 m in Site 597 basement indicates a zone of oxidative alteration that became shallower with time as the deeper, more constricted fracture systems were filled by secondary mineralization. In this report we present the first results of the K-Ar dating of celadonite formation age; celadonite formation reflects end-stage hydrothermal alteration in Site 597 basement. Three celadonite dates obtained from Site 597 samples include 13.1 ± 0.3 m.y. from 17 m basement depth (Hole 597B), 19.9 ± 0.4 m.y. from 18 m basement depth (Hole 597C), and 19.3 ± 1.6 m.y. from 60 m basement depth (Hole 597C). The age of host rock crystallization (28.6 m.y.) and the K-Ar dates of celadonite formation establish that hydrothermal alteration in the upper 70 m of Site 597 basement continued for at least 10 m.y. and possibly as long as 16 m.y. after basalt crystallization at the ridge crest. Assuming a half-spreading rate of 55 km/m.y., we calculate that hydrothermal circulation was active in shallow basement at a distance of at least 550 km off ridge crest and possibly as far as 1000 km off ridge crest.

Strontium, oxygen and hydrogen isotope ratios of basalts from DSDP Hole 504B

DSDP Hole 504B was drilled into 6 Ma crust, about 200 km south of the Costa Rica Rift, Galapagos Spreading Center, penetrating 1.35 km into a section that can be divided into four zones-Zone I: oxic submarine weathering; Zone II: anoxic alteration; Zones III and IV: hydrothermal alteration to greenschist facies. In Zone III there is intense veining of pillow basalts. Zone IV consists of altered sheeted dikes. Isotopic geochemical signatures in relation to the alteration zones are recorded in Hole 504B, as follows: Zone Depth(m) Average87Sr/86Sr Average delta18O (?) Average deltaD (?) I 275-550 0.7032 7.3 -63 II 550-890 0.7029 6.5 -45 III 890-1050 0.7035 5.6 -31 IV 1050-1350 0.7032 5.5 -36 Alteration temperatures are as low as 10°C in Zones I and II based on oxygen isotope fractionation. Strontium isotopic data indicate that a circulation of seawater is much more restricted in Zone II than in Zone I. Fluid inclusion measurements of vein quartz indicate the alteration temperature was mainly 300 +/- 20°C in Zones III and IV, which is consistent with secondary mineral assemblages. The strontium, oxygen, and hydrogen isotopic compositions of hydrothermal fluids which were responsible for the greenschist facies alteration in Zones III and IV are estimated to be 0.7037, 2?, and 3?, respectively. Strontium and oxygen isotope data indicate that completely altered portions of greenstones and vein minerals were in equilibrium with modified seawater under low water/rock ratios (in weight) of about 1.6. This value is close to that of the end-member hydrothermal fluids issuing at 21°N EPR. Basement rocks are not completely hydrothermally altered. About 32% of the greenstones in Zones III and IV have escaped alteration. Thus 1 g of fresh basalt including the 32% unaltered portion are required in order to make 1 g of end-member solution from fresh seawater in water-rock reactions.

Distribution of heavy minerals in sediment cores MSSTS-1 and DVDP-12

This study encompasses an investigation of the heavy mineral composition of early Oligocene-Quaternary glacial and glaciomarine sediment sequences from the Victoria Land Basin and the fjords of the South Victoria Land, Ross Sea, Antarctica. The sediment cores used were recovered during different international drilling campaigns (DVDP- 12, CIROS-2, MSSTS-l, CRP-l, CRP-212A). The main objectives were to identify possible source rocks and to unravel the provenance regions of different heavy minerals and mineral groups. Moreover, with the available data an attempt to reconstruct the general development and codiguration of the Antarctic ice sheets during the Cenozoic was also made

Análisis genómico y funcional de los sistemas de Quorum Sensing en Rhizobium leguminosarum

Rhizobium leguminosarum (Rl) es una alfa-proteobacteria capaz de establecer una simbiosis diazotrófica con distintas leguminosas. A pesar de la importancia de esta simbiosis en el balance global del ciclo del nitrógeno, muy pocos genomas de rhizobios han sido secuenciados, que aporten nuevos conocimientos relacionados con las características genéticas que contribuyen a importantes procesos simbióticos. Únicamente tres secuencias completas de Rl han sido publicadas: Rl bv. viciae 3841 y dos genomas de Rl bv. trifolii (WSM1325 y WSM2304), ambos simbiontes de trébol. La secuencia genómica de Rlv UPM791 se ha determinado por medio de secuenciación 454. Este genoma tiene un tamaño aproximado de 7.8 Mb, organizado en un cromosoma y 5 replicones extracromosómicos, que incluyen un plásmido simbiótico de 405 kb. Este nuevo genoma se ha analizado en relación a las funciones simbióticas y adaptativas en comparación con los genomas completos de Rlv 3841 y Rl bv. trifolii WSM1325 y WSM2304. Mientras que los plásmidos pUPM791a y b se encuentran conservados, el plásmido simbiótico pUPM791c exhibe un grado de conservación muy bajo comparado con aquellos descritos en las otras cepas de Rl. Uno de los factores implicados en el establecimiento de la simbiosis es el sistema de comunicación intercelular conocido como Quorum Sensing (QS). El análisis del genoma de Rlv UPM791 ha permitido la identificación de dos sistemas tipo LuxRI mediados por señales de tipo N-acyl-homoserina lactonas (AHLs). El análisis mediante HPLC-MS ha permitido asociar las señales C6-HSL, C7-HSL y C8-HSL al sistema rhiRI, codificado en el plásmido simbiótico; mientras que el sistema cinRI, localizado en el cromosoma, produce 3OH-C14:1-HSL. Se ha identificado una tercera sintasa (TraI) codificada en el plásmido simbiótico, pero su regulador correspondiente se encuentra truncado debido a un salto de fase. Adicionalmente, se han encontrado tres reguladores de tipo LuxR-orphan que no presentan una sintasa LuxI asociada. El efecto potencial de las señales tipo AHL se ha estudiado mediante una estrategia de quorum quenching, la cual interfiere con los sistemas de QS de la bacteria. Esta estrategia está basada en la introducción del gen aiiA de Bacillus subtilis, que expresa constitutivamente una enzima lactonasa degradadora de AHLs. Para llevar a cabo el análisis en condiciones simbióticas, se ha desarrollado un sistema de doble marcaje que permite la identificación basado en los marcadores gusA y celB, que codifican para una enzima β–glucuronidasa y una β–galactosidasa termoestable, respectivamente. Los resultados obtenidos indican que Rlv UPM791 predomina sobre la cepa Rlv 3841 para la formación de nódulos en plantas de guisante. La baja estabilidad del plásmido que codifica para aiiA, no ha permitido obtener una conclusión definitiva sobre el efecto de la lactonasa AiiA en competitividad. Con el fin de analizar el significado y la regulación de la producción de moléculas señal tipo AHL, se han generado mutantes defectivos en cada uno de los dos sistemas de QS. Se ha llevado a cabo un análisis detallado sobre la producción de AHLs, formación de biofilm y simbiosis con plantas de guisante, veza y lenteja. El efecto de las deleciones de los genes rhiI y rhiR en Rlv UPM791 es más drástico en ausencia del plásmido pUPM791d. Mutaciones en cinI o cinRIS muestran tanto ausencia de señales, como producción exclusivamente de las de bajo peso molecular, respectivamente, producidas por el sistema rhiRI. Estas mutaciones mostraron un efecto importante en simbiosis. El sistema rhiRI se necesita para un comportamiento simbiótico normal. Además, mutantes cinRIS generaron nódulos blancos e ineficientes, mientras que el mutante cinI fue incapaz de producir nódulos en ninguna de las leguminosas utilizadas. Dicha mutación resultó en la inestabilización del plasmido simbiótico por un mecanismo dependiente de cinI que no ha sido aclarado. En general, los resultados obtenidos indican la existencia de un modelo de regulación dependiente de QS significativamente distinto a los que se han descrito previamente en otras cepas de R. leguminosarum, en las cuales no se había observado ningún fenotipo relevante en simbiosis. La regulación de la producción de AHLs Rlv UPM791 es un proceso complejo que implica genes situados en los plásmidos UPM791c y UPM791d, además de la señal 3-OH-C14:1-HSL. Finalmente, se ha identificado un transportador de tipo RND, homologo a mexAB-oprM de P. aeruginosa e implicado en la extrusión de AHLs de cadena larga. La mutación he dicho transportador no tuvo efectos apreciables sobre la simbiosis. ABSTRACT Rhizobium leguminosarum (Rl) is a soil alpha-proteobacterium that establishes a diazotrophic symbiosis with different legumes. Despite the importance of this symbiosis to the global nitrogen cycling balance, very few rhizobial genomes have been sequenced so far which provide new insights into the genetic features contributing to symbiotically relevant processes. Only three complete sequences of Rl strains have been published: Rl bv. viciae 3841, harboring six plasmids (7.75 Mb) and two Rl bv. trifolii (WSM1325 and WSM2304), both clover symbionts, harboring 5 and 4 plasmids, respectively (7.41 and 6.87 Mb). The genomic sequence of Rlv UPM791 was undertaken by means of 454 sequencing. Illumina and Sanger reads were used to improve the assembly, leading to 17 final contigs. This genome has an estimated size of 7.8 Mb organized in one chromosome and five extrachromosomal replicons, including a 405 kb symbiotic plasmid. Four of these plasmids are already closed, whereas there are still gaps in the smallest one (pUPM791d) due to the presence of insertion elements and repeated sequences, which difficult the assembly. The annotation has been carried out thanks to the Manatee pipeline. This new genome has been analyzed as regarding symbiotic and adaptive functions in comparison to the Rlv 3841 complete genome, and to those from Rl bv. trifolii strains WSM1325 and WSM2304. While plasmids pUPM791a and b are conserved, the symbiotic plasmid pUPM791c exhibited the lowest degree of conservation as compared to those from the other Rl strains. One of the factors involved in the symbiotic process is the intercellular communication system known as Quorum Sensing (QS). This mechanism allows bacteria to carry out diverse biological processes in a coordinate way through the production and detection of extracellular signals that regulate the transcription of different target genes. Analysis of the Rlv UPM791 genome allowed the identification of two LuxRI-like systems mediated by N-acyl-homoserine lactones (AHLs). HPLC-MS analysis allowed the adscription of C6-HSL, C7-HSL and C8-HSL signals to the rhiRI system, encoded in the symbiotic plasmid, whereas the cinRI system, located in the chromosome, produces 3OH-C14:1-HSL, previously described as “bacteriocin small”. A third synthase (TraI) is encoded also in the symbiotic plasmid, but its cognate regulator TraR is not functional due to a fameshift mutation. Three additional LuxR orphans were also found which no associated LuxI-type synthase. The potential effect of AHLs has been studied by means of a quorum quenching approach to interfere with the QS systems of the bacteria. This approach is based upon the introduction into the strains Rl UPM791 and Rl 3841 of the Bacillus subtilis gene aiiA expressing constitutively an AHL-degrading lactonase enzyme which led to virtual absence of AHL even when AiiA-expressing cells were a fraction of the total population. No significant effect of AiiA-mediated AHL removal on competitiveness for growth in solid surface was observed. For analysis under symbiotic conditions we have set up a two-label system to identify nodules produced by two different strains in pea roots, based on the markers gusA and celB, encoding a β–glucuronidase and a thermostable β–galactosidase enzymes, respectively. The results obtained show that Rlv UPM791 outcompetes Rlv 3841 for nodule formation in pea plants, and that the presence of the AiiA plasmid does not significantly affect the relative competitiveness of the two Rlv strains. However, the low stability of the pME6863 plasmid, encoding aiiA, did not lead to a clear conclusion about the AiiA lactonase effect on competitiveness. In order to further analyze the significance and regulation of the production of AHL signal molecules, mutants deficient in each of the two QS systems were constructed. A detailed analysis of the effect of these mutations on AHL production, biofilm formation and symbiosis with pea, vetch and lentil plants has been carried out. The effect of deletions on Rlv UPM791 rhiI and rhiR genes is more pronounced in the absence of plasmid pUPM791d, as no signal is detected in UPM791.1, lacking this plasmid. Mutations in cinI or cinRIS show either no signals, or only the small ones produced by the rhiRI system, suggesting that cinR might be regulating the rhiRI system. These mutations had a strong effect on symbiosis. Analysis of rhi mutants revealed that rhiRI system is required for normal symbiotic performance, as a drastic reduction of symbiotic fitness is observed when rhiI is deleted, and rhiR is essential for nitrogen fixation in the absence of plasmid pUPM791d. Furthermore, cinRIS mutants resulted in white and inefficient nodules, whereas cinI mutant was unable to form nodules on any legume tested. The latter mutation is associated to the instabilization of the symbiotic plasmid through a mechanism still uncovered. Overall, the results obtained indicate the existence of a model of QS-dependent regulation significantly different to that previously described in other R. leguminosarum strains, where no relevant symbiotic phenotype had been observed. The regulation of AHL production in Rlv UPM791 is a complex process involving the symbiotic plasmid (pUPM791c) and the smallest plasmid (pUPM791d), with a key role for the 3-OH-C14:1-HSL signal. Finally, we made a search for potential AHL transporters in Rlv UPM791 genome. These signals diffuse freely across membranes, but in the case of the long-chain AHLs an active efflux system might be required, as it has been described for C12-HSL in the case of Pseudomonas aeruginosa. We have identified a putative AHL transporter of the RND family homologous to P. aeruginosa mexAB-oprM. A mutant strain deficient in this transporter has been generated, and TLC analysis shows absence of 3OH-C14:1-HSL in its supernatant. This deficiency was complemented by the reintroduction of an intact copy of the genes via plasmid transfer. The mutation in mexAB genes had no significant effects on the symbiotic performance of R. leguminosarum bv. viciae.

Modelo explicativo de la relación entre productividad y valores organizacionales, en la PYME del sector metalúrgico y minero de Venezuela

Como consecuencia de los procesos de globalización el mundo empresarial está sometido a constantes cambios que han originado la necesidad en las empresas de evaluar su funcionamiento, con el objeto de adecuar su gestión a las mejores prácticas gerenciales y operativas, en función de adaptarse a las exigencias presentes en los escenarios en que están inmersas. La presente investigación tiene como propósito desarrollar un modelo explicativo de la relación entre la productividad y los valores organizacionales, teniendo como premisa los distintos planteamientos o teorías que destacan la importancia que tienen los valores organizacionales para que las empresas logren sus metas. Específicamente se tomó como referencia la clasificación de los valores organizacionales, que contempla el modelo de gestión de Dirección por Valores (DPV), de García y Dolan (2001). Las PYMES, al considerar el efecto que tienen los valores organizacionales en la productividad, pueden apoyar su gestión a través del compromiso de las personas para lograr los resultados de productividad que quieren o necesitan alcanzar. El abordaje del estudio se ha basado en la investigación explicativa, a través de la cual se exponen las razones de ocurrencia de un fenómeno o se muestran los mecanismos por los que se relacionan dos o más variables, lo que permitió conjugar definiciones y supuestos de las relaciones encontradas entre los valores organizacionales identificados de acuerdo a la opinión de los entrevistados y que resultaron ser significativos con los resultados de productividad que presentan las empresas que fueron objeto de esta investigación La población estuvo conformada por 40 empresas activas del sector metalúrgico y minero de Ciudad Guayana, Estado Bolívar, Venezuela, pertenecientes a la Asociación de Industriales Metalúrgicos y de Minería de la región Guayana (AIMM) y al directorio de la Cámara de Industriales y Mineros de Guayana. La muestra estudiada corresponde a 25 empresas que representan el 62% de la población. El proceso que se siguió para generar el modelo explicativo contempla tres etapas. La primera consiste en la fase descriptiva donde se recogió la información referente a la productividad de las empresas y a la determinación de los valores organizacionales identificados a través del análisis cualitativo de las entrevistas que se realizaron a los informantes de las empresas de la muestra. Para ello se utilizó el software Atlas ti 6.0. La segunda etapa, denominada comparativa, consistió en determinar la relación entre la productividad y los valores organizacionales, a través de las tablas de contingencias, de acuerdo con el grado de significancia que mostró el estadístico Chi- cuadrado. La tercera y última etapa del proceso es la fase explicativa que consistió en estimar la magnitud de la relación entre las variables productividad y valores organizacionales utilizando el coeficiente de contingencia de Pearson, y en establecer las asociaciones de acuerdo a las proximidades observadas que resultaron del análisis de correspondencias múltiples. Entre los hallazgos del estudio desarrollado se encontró que la productividad de las empresas puede fijarse en tres categorías: alta, media y baja y entre los factores que afectan a la productividad destacan, en el contexto externo: el gobierno, los clientes y los proveedores y en el contexto interno: la mano de obra, los materiales y los suministros. Según la opinión de los gerentes entrevistados, los valores organizacionales que caracterizan a las empresas del sector estudiado se agrupan en veintisiete categorías, que se clasifican en los siguientes componentes: entorno mercado, clientes, proveedores y otras empresas aliadas, medio ambiente, forma de tratar la Dirección al resto de empleados, forma de trabajar cotidiana y gestión de los recursos económicos. Los valores organizacionales que resultaron ser significativos fueron la innovación, la honestidad y el orden y limpieza. La magnitud de la relación encontrada del valor innovación fue moderadamente fuerte. Se infiere que las empresas, al tener una Productividad baja, deciden innovar en el desarrollo de nuevos productos. El valor honestidad arrojó una relación moderadamente fuerte, determinando que las empresas de Productividad alta basan sus relaciones con los proveedores en la honestidad. Finalmente, el valor orden y limpieza muestra una relación moderadamente débil, lo que hace suponer que las empresas de Productividad media tienen alguna preferencia por mantener el orden y limpieza en las áreas de trabajo. El modelo explicativo de la relación entre productividad y valores organizacionales, en las PYMES del sector metalúrgico y minero de Ciudad Guayana, quedó conformado por los siguientes componentes: mercado, clientes, proveedores y otras empresas aliadas, y medio ambiente. No se encontraron relaciones en los componentes forma de tratar la Dirección al resto de empleados, forma de trabajar cotidiana y gestión de los recursos económicos. ABSTRACT As a result of globalization processes, the business world is subject to constant change. This has resulted in the need for companies to evaluate their performance in order to adjust their processes to the best managerial and operational practices, with the goal to adapt to the demands present in the scenarios in which they are embedded. This research aimed to develop an explanatory model of the relationship between productivity and organizational values. In addition, it was based on the different approaches or theories that relate the importance for enterprises of the organizational values to achieve their goals. Specifically, reference was made to the classification of organizational values, which includes the model of Management by Values (DPV) following García and Dolan (1997). The SMEs, considering the effect of organizational values on productivity, can support their management through the commitment of their people to achieve productivity results that they want or need to accomplish. The study approach was based on explanatory research, which presents the reasons for occurrence of a phenomenon and the mechanisms through which two or more variables are related. This allowed to combine definitions and assumptions about the relationship found between organizational values and the productivity results of the companies that took part in this research. Organizational values were identified in the opinion of the managers interviewed, and were found to be significant with the productivity results. The population consisted of 40 active enterprises of the metallurgical and mining industry of Ciudad Guayana, Estado Bolivar, Venezuela. These enterprises were members of the Association of Metallurgical and Mining Industry of the Guayana Region (AIMM, by its acronym in Spanish) and the Directory of the Chamber of Industrial and Mining of Guayana. The sample of the study is comprised of 25 enterprises, which represent 62% of the total population. The process which has been followed to generate the explanatory model involves three stages. The first stage is the descriptive phase where the information about enterprises productivity and the determination of organizational values is gathered. These organizational values were identified by a qualitative analysis of the interviews conducted with managers of each enterprise. This analysis was performed using the Atlas ti 6.0 software. The second stage, denominated comparative, consisted in determining the relationship between productivity and organizational values through contingency tables, and according to the degree of significance showed by the Chi-Square, statistic. The third, and final stage of the process, is the explanatory phase. This consisted in estimating the magnitude of the relationship between productivity and organizational values variables using the Pearson's contingency coefficient. In addition, this stage comprises the establishment of the associations according to the observed proximities that resulted from the multiple correspondence analysis. Among the findings of this study, it was found that the productivity of enterprises can be set in three categories: high, medium and low. Additionally, it was found that in the external context the factors that stand out affecting productivity are: government policy, customers and suppliers, while in the domestic context they are: labor, materials and supplies. According to the opinion of the managers interviewed the organizational values that characterize the companies that were studied are grouped into twenty seven categories. These categories are classified into the following components: market environment, customers, suppliers and other allied companies, the environment, how Management deals with of the employees, way to work every day, and management of economic resources. Organizational values that were found to be significant were innovation, honesty and order and cleanliness. The magnitude of the relation of the innovation value was found to be moderately strong. It is inferred that companies that have low productivity decide to innovate in the development of new products. The honesty value showed a moderately strong relation, determining that high productivity enterprises base their relationships with suppliers on honesty. Lastly, the order and cleanliness value showed a moderately weak relation, which suggests that average productivity enterprises have a preference to maintain order and cleanliness in the work areas. The explanatory model of the relationship between productivity and organizational values, in the SMEs of the metallurgical and mining sector of Ciudad Guayana, was composed of the following components: market, customers, suppliers and other allied companies, and the environment. No relationships were found in the following components: how Management deals with employees, way to work every day, and management of economic resources.

Hydrolysis of lignocellulosic material to sugars as feedstock for growing microorganisms

Los materiales lignocelulósicos son potenciales precursores de recursos bioenergéticos, por lo que sería interesante desarrollar tecnologías capaces de capturar su energía y utilizarla en el sector del transporte como combustibles. El azúcar contenido en los materiales lignocelulósicos puede ser liberado por medio de la hidrólisis y usado después por microorganismos. El objetivo del proyecto es encontrar un método de separación de la celulosa y la biomasa de chopo en monómeros de glucosa por medio de la hidrólisis. Para ello se han estudiado tres métodos de hidrólisis: la mecano-catálisis, utilizando diferentes tipos de molinos y caolinita como catalizador, la hidrólisis con líquidos iónicos, estudiando la viabilidad de los reactivos [C4mim+][I-] y [C4mim+][PF6-], y la hidrólisis ácida, usando HCl en concentraciones y temperaturas distintas para optimizar el proceso. En todos los casos se ha llevado a cabo un pretratamiento y se ha aplicado el método de TLC como verificación del proceso. Los tres métodos se han comparado y se ha desarrollado un método de correlación entre la mancha de TLC y la concentración del producto.

A mutant of Mycobacterium smegmatis defective in the biosynthesis of mycolic acids accumulates meromycolates

Mycolic acids are a major constituent of the mycobacterial cell wall, and they form an effective permeability barrier to protect mycobacteria from antimicrobial agents. Although the chemical structures of mycolic acids are well established, little is known on their biosynthesis. We have isolated a mycolate-deficient mutant strain of Mycobacterium smegmatis mc2-155 by chemical mutagenesis followed by screening for increased sensitivity to novobiocin. This mutant also was hypersensitive to other hydrophobic compounds such as crystal violet, rifampicin, and erythromycin. Entry of hydrophobic probes into mutant cells occurred much more rapidly than that into the wild-type cells. HPLC and TLC analysis of fatty acid composition after saponification showed that the mutant failed to synthesize full-length mycolic acids. Instead, it accumulated a series of long-chain fatty acids, which were not detected in the wild-type strain. Analysis by 1H NMR, electrospray and electron impact mass spectroscopy, and permanganate cleavage of double bonds showed that these compounds corresponded to the incomplete meromycolate chain of mycolic acids, except for the presence of a β-hydroxyl group. This direct identification of meromycolates as precursors of mycolic acids provides a strong support for the previously proposed pathway for mycolic acid biosynthesis involving the separate synthesis of meromycolate chain and the α-branch of mycolic acids, followed by the joining of these two branches.