Tools & Trends March 2005, Vol. 14, No. 2

Community Development News from the Iowa Department of Economic Development

A-1 Monthly Public Assistance Statistical Report Family Investment Program, March 2005

A-1 Monthly Public Assistance Statistical Report Family Investment Program

A-7 Statistical Report On FIP Applications And Cases Discontinued, March 2005

A-7 Statistical Report On FIP Applications And Cases Discontinued

A-1 Monthly Public Assistance Statistical Report Family Investment Program, April 2005

Monthly Public Assistance Statistical Report Family Investment Program

Tools & Trends, June 2005, Vol. 14, No. 3

News from the Iowa Department of Economic Development

A-1 Monthly Public Assistance Statistical Report Family Investment Program, May 2005

Monthly Public Assistance Statistical Report Family Investment Program

A-7 Statistical Report On FIP Applications And Cases Discontinued April 2005

Statistical Report On FIP Applications And Cases Discontinued

A-7 Statistical Report On FIP Applications And Cases Discontinued, May 2005

Statistical Report On FIP Applications And Cases Discontinued

Splitting statistical potentials into meaningful scoring functions: testing the prediction of near-native structures from decoy conformations

Background: Recent advances on high-throughput technologies have produced a vast amount of protein sequences, while the number of high-resolution structures has seen a limited increase. This has impelled the production of many strategies to built protein structures from its sequence, generating a considerable amount of alternative models. The selection of the closest model to the native conformation has thus become crucial for structure prediction. Several methods have been developed to score protein models by energies, knowledge-based potentials and combination of both.Results: Here, we present and demonstrate a theory to split the knowledge-based potentials in scoring terms biologically meaningful and to combine them in new scores to predict near-native structures. Our strategy allows circumventing the problem of defining the reference state. In this approach we give the proof for a simple and linear application that can be further improved by optimizing the combination of Zscores. Using the simplest composite score () we obtained predictions similar to state-of-the-art methods. Besides, our approach has the advantage of identifying the most relevant terms involved in the stability of the protein structure. Finally, we also use the composite Zscores to assess the conformation of models and to detect local errors.Conclusion: We have introduced a method to split knowledge-based potentials and to solve the problem of defining a reference state. The new scores have detected near-native structures as accurately as state-of-art methods and have been successful to identify wrongly modeled regions of many near-native conformations.

A-1 Monthly Public Assistance Statistical Report Family Investment Program, June 2005

A-1 Monthly Public Assistance Statistical Report Family Investment Program, June 2005

A-7 Statistical Report On FIP Applications And Cases Discontinued, June 2005

A-7 Statistical Report On FIP Applications And Cases Discontinued, June 2005

A-1 Monthly Public Assistance Statistical Report Family Investment Program, July 2005

A-1 Monthly Public Assistance Statistical Report Family Investment Program, July 2005

The differentiation of fibre- and drug type Cannabis seedlings by gas chromatography/mass spectrometry and chemometric tools

Cannabis cultivation in order to produce drugs is forbidden in Switzerland. Thus, law enforcement authorities regularly ask forensic laboratories to determinate cannabis plant's chemotype from seized material in order to ascertain that the plantation is legal or not. As required by the EU official analysis protocol the THC rate of cannabis is measured from the flowers at maturity. When laboratories are confronted to seedlings, they have to lead the plant to maturity, meaning a time consuming and costly procedure. This study investigated the discrimination of fibre type from drug type Cannabis seedlings by analysing the compounds found in their leaves and using chemometrics tools. 11 legal varieties allowed by the Swiss Federal Office for Agriculture and 13 illegal ones were greenhouse grown and analysed using a gas chromatograph interfaced with a mass spectrometer. Compounds that show high discrimination capabilities in the seedlings have been identified and a support vector machines (SVMs) analysis was used to classify the cannabis samples. The overall set of samples shows a classification rate above 99% with false positive rates less than 2%. This model allows then discrimination between fibre and drug type Cannabis at an early stage of growth. Therefore it is not necessary to wait plants' maturity to quantify their amount of THC in order to determine their chemotype. This procedure could be used for the control of legal (fibre type) and illegal (drug type) Cannabis production.

A-7 Statistical Report On FIP Applications And Cases Discontinued, July 2005

A-7 Statistical Report On FIP Applications And Cases Discontinued, July 2005

A-1 Monthly Public Assistance Statistical Report Family Investment Program, August 2005

A-1 Monthly Public Assistance Statistical Report Family Investment Program, August 2005