Bioaccumulation and effects of TBT on molluscs from southern Portugal

Tese de dout. Ciências e Tecnologias do Ambiente, Faculdade de Ciências do Mar e do Ambiente, Univ. do Algarve, 2004

En torno a la imagen literaria de Alfonso V de Aragón: Fortún García de Ercilla y su traducción castellana del De dictis de Antonio Beccadelli. Edición y estudio

Alfonso V of Aragon (1396-1458), who won from his contemporaries the title “the Magnanimous”, became one of the most brilliant fifteenth century monarchs, not only because of being a shrewd politician and king of one of the main kingdoms in the Iberian Peninsula, but also due to his cultural activity. Thanks to him the Aragonese territories were extended throughout the Mediterranean up to Naples, where he established a magnificent court that turned into maybe the most remarkable centre of intellectual vitality and development of Humanism. His patronage attracted a considerable number of leading poets of the period, as well as the most important Italian humanists. The presence of so many writers and outstanding scholars, together with the academic environment that the monarch encouraged, promoted an enormous literary production in four languages: Latin, Spanish, Catalan and Italian. Additionally, the valuable library gathered by the king and the Academy founded in order to spread knowledge illustrate part of his intellectual concerns. This way, through his love to literature and generosity to men of letters, Alfonso the Magnanimous boosted the culture of that time. The principal protagonist in the cultural activities of the circle of erudites formed around the sovereign was Antonio Beccadelli, called Panormita (1394-1471). He, one of the most prominent personalities of Italian Humanism, assumed the role of main royal advisor. His work De dictis et factis Alphonsi regis (The sayings and deeds of king Alfonso), which will be studied in our dissertation, became a very popular text about Alfonso’s personality, as a kind of biography based on anecdotes of the Magnanimous’ life by way of exempla to be imitated. The success of these episodes lasted for a long time and they are appreciated even nowadays. The work was valued as specula principum and had great impact in sixteenth century, when De dictis was republished several times and translated from Latin into Spanish. One of these translations, the one by Fortún García de Ercilla, caught our interest since it is in a manuscript signed by Ercilla himself and this version is still unpublished...

Outbreak of Porcine Epidemic Diarrhea Virus in Portugal, 2015

An outbreak of porcine epidemic diarrhea virus (PEDV) in the South of Portugal in January 2015 and the spread of PEDV northwards in the territory are described. Comparative analysis of the amplified sequences showed a very high (99.0%) identity with the PEDV variant most recently reported in the United States and also show complete (100%) identity to the strains recently reported in Germany, supporting the hypothesis that a unique strain is currently circulating in Europe. The origin of this PEDV variant still needs to be elucidated and further studies in the remaining European countries may contribute to the knowledge.

State of the art of industrial wood protection in Portugal

This work intended to give a perspective of industrial wood protection in Portugal. A survey was made of the companies treating wood mainly for use classes 3 and 4 such as autoclave treatments with biocides and wood modification procedures. Currently there are 23 companies with 33 production plants with an autoclave installed for wood preservation by impregnation. There are also two companies producing modified wood by thermal treatment. Most of the plants are located in the central and northern regions of Portugal. The leading preservation chemicals used in Portugal are Tanalith E and Celcure brands. The main wood species used in all companies is Pinus pinaster from local producers. The products commercialized by the treating companies are diverse: pre-fabricated houses, garden furniture and playgrounds, decks, poles, stakes, and sawn wood. Modified wood producers sell mostly decks and cladding. Considerable changes are expected in the next few years due to the requirements of European Directives and the typical constraints of the Portuguese market.

An experimental study of gill net and trammel net 'ghost fishing' off the Algarve (southern Portugal)

Four 100 m lengths of both monofilament gill nets and trammel nets were deployed at depths between 15 and 18 m off the coast of the Algarve (south of Portugal) between April 1995 and June 1996. The nets were set on a natural rocky bottom with one end cut loose to simulate lost nets. Changes in net structure (net height, effective fishing area, movement, colonisation, wear and tear) and their catches (species, sizes, numbers, and biomass) were monitored by divers. Similar patterns were observed in all the nets, with a sharp decrease in net height and effective fishing area, and an increase in visibility within the first few weeks. Net movement was negligible except in the case of interference from other fishing gears. Catch rates were initially comparable to normally fished gill nets and trammel nets in this area, but decreased steadily over time. No sea birds, reptiles or mammals were caught in any of the 8 nets. Catches were dominated by fish (89 % by number, at least 27 species), in particular by sea breams (Sparidae) and wrasses (Labridae). Under the conditions experienced throughout the study the fishing Lifetime of a 'lost' net is between 15 and 20 wk. Based on an exponential model, we estimated that 100 m lengths of gill net and trammel net will catch 314 and 221 fish respectively over a 17 wk period. However, we consider this to be an underestimate due to high rates of predation and scavenging by octopuses, cuttlefish, moray eels, conger eels, and other fish such as the wrasse Coris julis. When the nets were surveyed in the following spring, 8 to 11 mo after being deployed, they were found to be completely destroyed or heavily colonised by algae and had become incorporated into the reef.

Bycatch of crustacean and fish bottom trawl fisheries from southern Portugal (Algarve)

As part of two research projects for analysing bycatch and discards, we quantified catch composition, catch rates, bycatch and discard,, in two important commercial bottom trawl fisheries (crustacean and fish trawls) off the Southern coast of Portugal (Algarve). Stratified sampling by onboard observers took place from February 1999 to March 2001 and data were collected from 165 tows during 52 fishing trips. Commercial tat-get species included crustaceans: blue and red shrimp (Aristeus antennatus), deep-water rose shrimp (Parapenaeus longirostris), Norway lobster (Nepharops norvegicus); and fishes: scabreams (Diplodus spl). and Pagellus Spp.), horse Mackerels (Trachurus spp.) and European hake (Merluccius merluccius). The trawl fisheries are characterised by considerable amounts of bycatch: 59.5% and 80.4% of the overall total catch for crustacean and fish trawlers respectively. A total of 255 species were identified, which belonged to 15 classes of organisms ( 137 vertebrates, 112 invertebrates and algae). Crustacean trawlers had higher bycatch biodiversity. Bony fish (45.6% and 37.8%) followed by crustaceans (14.6% and 11.5%) were the dominant bycatch components of both crustacean and fish trawlers respectively. The influence of a number of factors (e.g. depth, fishing gear, tow duration and season) on bycatch and discards is discussed.

Comparative Behavior of Wild and Hatchery Reared White Sea Bream (Diplodus sargus) Released on Artificial Reefs Off the Algarve (Southern Portugal)

Three hatchery produced and reared (HPR) and five wild white sea bream (Diplodus sargus) were double tagged with Vemco V8SC-2L acoustic transmitters and Floy Tag T-bar anchor tags, and released on artificial reefs located near a natural reef off the southern coast of Portugal. Passive telemetry was used to monitor movements of the white sea bream over a nine week period from April to June 2007. Differences in behavior at release, habitat association (artificial vs. natural reef), and in daily movements were registered. Wild fish moved from one habitat to the other with increased preference for the artificial habitat during the day, whereas HPR fish showed no site fidelity or consistent daily movement pattern and left the release site soon after release. Comparison of Minimum Convex Polygon (MCP) showed a higher area usage by wild fish. This experiment shows that these artificial reefs are used on a daily basis by wild white sea bream but apparently are not optimal release locations for hatchery produced white sea bream.

Weight-length relationships for fish species discarded in commercial fisheries of the Algarve (southern Portugal)

Weight and length descriptive statistics are reported for 73 fish species discarded in the commercial fisheries from the south coast of Portugal. Parameters of the weight-length relationship were estimated for 57 of these species. These are the first weight-length parameters reported for 20 of these species. For an additional 16 species for which no weight-length parameters have been reported, the parameter a was estimated by setting b = 3.0. Samples were used from five gear types: crustacean trawler, fish trawler, pelagic purse seine, demersal purse seine and trammel net. Samples were obtained from depths ranging from <30 m to >500 m and included pelagic and demersal species.

First record of Ocinebrina nicolai (Mollusca: Gastropoda: Muricidae: Ocenebrinae) in North-Eastern Atlantic waters

Ocinebrina nicolai Monterosato, 1884 a marine mollusc belonging to the Muricidae family is reported from Algarve, south coast of Portugal for the first time and is a new record for the biodiversity of the Portuguese malacological fauna and northeastern Atlantic waters. This species with a medium-size shell for the genus (14–16 mm) was initially sampled during a baseline project that studied marine biotopes in the central Algarve region. This short note presents a brief diagnosis of the species, provides local information on geographical distribution, habitat, and compares it with other congeneric species found in Portugal: Ocinebrina aciculata (Lamarck, 1822) and Ocinebrina edwardsii (Payraudeau, 1826).

A comparison of monofilament gillnet and small hook longline selectivity in a multispecies artisanal fishery in the Algarve, Southern Portugal

As part of ongoing studies concerned with the small-scale fisheries of the South of Portugal, experimental fishing was carried out with monofilament gillnets and small hook longlines within the same area. Sixty-two species were caught, of which 20 were common to both gears. Pronounced differences in terms of the relative importance of different species in the catches were observed. Size selection patterns also differed, with highly overlapped hook catch distributions and few species showing evidence for size selectivity. In contrast, strong selectivity was characteristic of species which tend to be "wedged" in gillnets. Whereas smaller stretched mesh sizes (particularly 40 and 50 mm) caught significant numbers of illegal sized fish, this was minimal in the longlines. Some implications for management are discussed.

Transferability of environmental favourability models in geographic space: The case of the Iberian desman (Galemys pyrenaicus) in Portugal and Spain

Transferring distribution models between different geographical areas may be problematic, as the performance of models outside their original scope is hard to predict. A modelling procedure is needed that gets the gist of the environmental descriptors of a distribution area, without either overfitting to the training data or overestimating the species’ distribution potential.We tested the transferability power of the favourability function, a generalized linear model, on the distribution of the Iberian desman (Galemys pyrenaicus) in the Iberian territories of Portugal and Spain.We also tested the effects of two of the main potential constraints on model transferability: the analysed ranges of the predictor variables, and the completeness of the species distribution data. We modelled 10 km×10km presence/absence data from Portugal and Spain separately, extrapolated each model to the other country, and compared predictions with observations. The Spanish model, despite arguably containing more false absences, showed good predictive ability in Portugal. The Portuguese model, whose predictors ranged between only a subset of the values observed in Spain, overestimated desman distribution when transferred.We discuss possible reasons for this differential model behaviour, and highlight the importance of this kind of models for prediction and conservation applications

Calibration of Grassmaster II to estimate green and dry matter yield in Mediterranean pastures: effects of pasture moisture content

Accurate assessment of standing pasture biomass in livestock production systems is a major factor for improving feed planning. Several tools are available to achieve this, including the GrassMaster II capacitance meter. This tool relies on an electrical signal, which is modified by the surrounding pasture. There is limited knowledge on how this capacitance meter performs in Mediterranean pastures. Therefore, we evaluated the GrassMaster II under Mediterranean conditions to determine (i) the effect of pasture moisture content (PMC) on the meter’s ability to estimate pasture green matter (GM) and dry matter (DM) yields, and (ii) the spatial variability and temporal stability of corrected meter readings (CMR) and DM in a bio-diverse pasture. Field tests were carried out with typical pastures of the southern region of Portugal (grasses, legumes, mixture and volunteer annual species) and at different phenological stages (and different PMC). There were significant positive linear relations between CMR and GM (r2 = 0.60, P < 0.01) and CMR and DM (r2 = 0.35, P < 0.05) for all locations (n = 347). Weak relationships were found for PMC (%) v. slope and coefficient of determination for both GM and DM. A significant linear relation existed for CMR v. GM and DM for PMC >80% (r2= 0.57, P < 0.01, RMSE = 2856.7 kg ha–1, CVRMSE=17.1% to GM; and r2= 0.51, P < 0.01,RMSE = 353.7 kg ha–1, CVRMSE = 14.3% to DM). Therefore, under the conditions of this current study there exists an optimum PMC (%) for estimating both GM and DM with the GrassMaster II. Repeated-measurements taken at the same location on different dates and conditions in a bio-diverse pasture showed similar and stable patterns between CMR and DM (r2= 0.67, P < 0.01, RMSE = 136.1 kg ha–1, CVRMSE = 6.5%). The results indicate that the GrassMaster II in-situ technique could play a crucial role in assessing pasture mass to improve feed planning under Mediterranean conditions.

Juniperus navicularis - a study of Portuguese population structure and fitness

Juniperus navicularis Gand. is a dioecious endemic conifer that constitutes the understory of seaside pine forests in Portugal, areas currently threatened by increasing urban expansion. The aim of this study is to assess the conservation status of previously known populations of this species located on its core area of distribution. The study was performed in south-west coast of Portugal. Three populations varying in size and pine density were analyzed. Number of individuals, population density, spatial distribution and individual characteristics of junipers were estimated. Female cone, seed characteristics and seed viability were also evaluated. Results suggest that J. navicularis populations are vulnerable because seminal recruitment is scarce, what may lead to a reduction of genetic variability due solely to vegetative propagation. This vulnerability seems to be strongly determined by climatic constraints toward increasing aridity. Ratio between male and female shrubs did not differ from 1:1 in any population. Deviations from 1:1 between mature and non-mature plants were found in all populations, denoting population ageing. Very low seed viability was observed. A major part of described Juniperus navicularis populations have disappeared through direct habitat loss to urban development, loss of fitness in drier and warmer locations and low seed viability. This study is the first to address J. navicularis conservation, and represents a valuable first step toward this species preservation.

Effects of clouds on the surface shortwave radiation at a rural inland mid-latitude site

Seven years (2003–2010) of measured shortwave (SW) irradiances were used to obtain estimates of the 10 min averaged effective cloud optical thickness (ECOT) and of the shortwave cloud radiative effect (CRESW) at the surface in a mid-latitude site (Évora — south of Portugal), and its seasonal variability is presented. The ECOT, obtained using transmittance measurements at 415 nm, was compared with the correspondent MODIS cloud optical thickness (MODIS COT) for non-precipitating water clouds and cloud fractions higher than 0.25. This comparison showed that the ECOT represents well the cloud optical thickness over the study area. The CRESW, determined for two SW broadband ranges (300–1100 nm; 285–2800 nm), was normalized (NCRESW) and related with the obtained ECOT. A logarithmic relation between NCRESW and ECOT was found for both SW ranges, presenting lower dispersion for overcast-sky situations than for partially cloudy-sky situations. The NCRESW efficiency (NCRESW per unit of ECOT) was also related with the ECOT for overcast-sky conditions. The relation found is parameterized by a power law function showing that NCRESW efficiency decreases as the ECOT increases, approaching one for ECOT values higher than about 50.

EFEITOS DE CENÁRIOS DE USO DO SOLO NA VAZÃO E PRODUÇÃO DE SEDIMENTOS NA BACIA DO RIO COBRES, PORTUGAL

Introdução Caracterização da área de estudo Materiais e métodos O modelo SWAT Dados de chuva, vazão e produção de sedimentos Tipos de solos e determinação dos parâmetros do SWAT Análises Estatísticas Cenários de Uso do Solo Resultados e discussões Estimativa da Vazão Estimativa da produção de sedimentos Modelagem Hidrossedimentológica em Diferentes Cenários Conclusões Referências bibliográficas RESUMO – A erosão dos solos é um dos mais graves problemas ambientais em todo o mundo, principalmente em regiões semiáridas que sofrem com a variabilidade espaço-temporal da precipitação. Este artigo analisou os processos hidrossedimentológicos na Bacia do Rio Cobres, localizada na porção semiárida de Portugal, utilizando o modelo SWAT. Neste estudo foram utilizados dados diários de precipitação, temperatura, umidade do ar, vazão e produção de sedimentos, para o período de 1960 a 2000, mapas digitais de elevação do terreno com resolução espacial de 90 m, uso e ocupação do solo e tipos de solo da bacia. Os resultados demonstraram a eficácia do modelo na calibração da vazão, com Coeficiente de Determinação (R²) = 0,81 e Coeficiente de Nash-Sutcliffe (NS) = 0,63, e também para produção de sedimentos com R² = 0,62 e NS = 0,47. O Cenário 3 (Mata) apresentou o maior decréscimo na vazão média, em relação aos Cenários 1 (Real) e 2 (Pastagem). Conclui-se que o modelo SWAT acoplado ao SIG é uma ferramenta poderosa na análise espaço-temporal do comportamento dos processos hidrossedimentológicos. Palavas-chave: SIG, modelo hidrossedimentológico, erosão ABSTRACT – Effects of Scenarios of Land Use on Runoff and Sediment Yield for Cobres River Basin, Portugal. Soil erosion is a major environmental problem worldwide, mainly in semiarid regions that suffer with rainfall spatial and temporal variability. Thus, this paper analysed the runoff-erosion process at the Cobres River Basin, located in semiarid portion of Portugal, using the SWAT model. In this paper, rainfall, temperature and humidity data from 1960 to 2000, and digital maps of land cover, terrain digital elevation model with spatial resolution of 90 m, soil types were used. The results showed the effectiveness of the model for the runoff calibration, with R² = 0.81 and NS = 0.63, and also for sediment yield with R² = 0.62 and NS = 0.47. Scenario 1 (Forest) had the highest decrease in average streamflow, in relation to the Scenarios 1 (Real) and 2 (Pasture) scenarios. It is concluded that the SWAT model coupled to GIS is a powerful tool in the analysis of temporal and spatial behaviour of runoff-erosion processes.