An Unprecedented Neolignan Skeleton from Chimarrhis turbinata

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

The absolute configuration of 1-(3 ',4 '-dihydroxycinnamoyl)cyclopentane-2,3-diol from the Amazonian tree Chimarrhis turbinata

An antioxidant, 1-(3',4'-dihydroxycinnamoyl) cyclopentane-2,3-diol [ or ( E)-2,3-dihydroxycyclopentyl-3-(3',4'-dihydroxyphenyl) acrylate ( 1)], and two known trans- and cis-chlorogenic acid methyl esters were isolated from the ethanolic extract of the leaves of Chimarrhis turbinata. The relative configuration of 1 was determined by NMR and by comparison of the circular dichroic spectrum ( CD) with those of the enantiomers of synthetic 3', 4'-dimethoxycinnamoyl analogues. The absolute configuration of one of the synthetic enantiomers was determined using the CD exciton chirality method. This established the structure of naturally occurring 1 as (E)- 2,3-dihydroxycyclopentyl- 3-(3', 4'-dihydroxyphenyl) acrylate.

Indole glucoalkaloids from Chimarrhis turbinata and their evaluation as antioxidant agents and acetylcholinesterase inhibitors

As part of our study on bioactive agents from Brazilian rainforest plants, two new glucoalkaloids, 3,4-dehydro-strictosidine (1) and 3,4-dehydro-strictosidinic acid (2), were isolated from Chimarrhis turbinata, along with seven known glucoalkaloids, cordifoline (3), strictosidinic acid (4), strictosidine (5), 5alpha-carboxystrictosidine (6), turbinatine (7), desoxycordifoline (8), and harman-3-carboxylic acid (9). The structures of the new alkaloids were established on the basis of comprehensive spectral analysis, mainly 1D and 2D NMR experiments, as well as high-resolution HRESIMS. Alkaloid 3 showed strong free-radical scavenging activity against 1,1-diphenyl-2-picrylhydrazyl (DPPH) as well as pronounced antioxidant activity evidenced by redox properties measured by ElCD-HPLC. Additionally, alkaloids 1-9 were submitted to TLC screening for acetylcholinesterase inhibitors. Both 7 and 8 were shown to be moderate acetylcholinesterase inhibitors at a concentration of 0.1 and 1.0 muM, respectively. In an in vitro rat brain assay, 7 showed moderate activity (IC50 1.86 muM), compared to the standard compound, galanthamine (IC50 0.92 muM).

New biflavonoid and other flavonoids from the leaves of Chimarrhis turbinata and their antioxidant activities

A new biflavonol, named chimarrhoside (1), and eight known flavonol glycosides (2-9), were isolated from the leaves of Chimarrhis turbinata. Their structures were established on the basis of 1D and 2D NMR experiments as quercetin-3-O-rutinoside (2), kaempferol-3-O-rutinoside (3), kaempferol-3-O-α-L-rhamnopyranosyl-(1→6)-β-D-galactopyranoside (4), quercetin-3-O-α-L-rhamnopyranosyl-(1→6)-β-D- galactopyranoside (5), 6-hydroxy-rutin (6), kaempferol-3-O-D-galactopyranoside (7), kaempferol-3-O-D-glucopyranoside (8) and kaempferol-3-O-α- Lrhamnopyranosyl-(1→6)-α-L-rhamnopyranosyl-(1→4) -β-D-glucopyranoside (9). In addition, catechin (10) and catechin-(4α→8)-catechin-procyanidin B-3) (11) were isolated. The crude extract, fractions and isolated compounds were evaluated for their antioxidative properties using an autographic assay based on β-carotene bleaching on TLC plates, and spectrophotometric detection by reduction of the stable 1,1-diphenyl-2-picrylhydrazyl (DPPH) free radical. Flavonoids 2, 5, 6, 10 and 11 displayed strong free radical scavenging activity, when compared with the standards BHT and rutin. ©2005 Sociedade Brasileira de Química.

Indole monoterpene alkaloids from Chimarrhis turbinata DC Prodr.: a contribution to the chemotaxonomic studies of the Rubiaceae family

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Lipid, carbon and nitrogen content and fatty acid composition of Temora longicornis females and different food species during the experiment

Temora longicornis, a dominant calanoid copepod species in the North Sea, is characterised by low lipid reserves and high biomass turnover rates. To survive and reproduce successfully, this species needs continuous food supply and thus requires a highly flexible digestive system to exploit various food sources. Information on the capacity of digestive enzymes is scarce and therefore the aim of our study was to investigate the enzymatic capability to respond to quickly changing nutritional conditions. We conducted two feeding experiments with female T. longicornis from the southern North Sea off Helgoland. In the first experiment in 2005, we tested how digestive enzyme activities and enzyme patterns as revealed by substrate SDS-PAGE (sodium dodecylsulfate polyacrylamide gel electrophoresis) responded to changes in food composition. Females were incubated for three days fed ad libitum with either the heterotrophic dinoflagellate Oxyrrhis marina or the diatom Thalassiosira weissflogii. At the beginning and at the end of the experiment, copepods were deep-frozen for analyses. The lipolytic enzyme activity did not change over the course of the experiment but the enzyme patterns did, indicating a distinct diet-induced response. In a second experiment in 2008, we therefore focused on the enzyme patterns, testing how fast changes occur and whether feeding on the same algal species leads to similar patterns. In this experiment, we kept the females for 4 days at surplus food while changing the algal food species daily. At day 1, copepods were offered O. marina. On day 2, females received the cryptophycean Rhodomonas baltica followed by T. weissflogii on day 3. On day 4 copepods were again fed with O. marina. Each day, copepods were frozen for analysis by means of substrate SDS-PAGE. This showed that within 24 h new digestive enzymes appeared on the electrophoresis gels while others disappeared with the introduction of a new food species, and that the patterns were similar on day 1 and 4, when females were fed with O. marina. In addition, we monitored the fatty acid compositions of the copepods, and this indicated that specific algal fatty acids were quickly incorporated. With such short time lags between substrate availability and enzyme response, T. longicornis can successfully exploit short-term food sources and is thus well adapted to changes in food availability, as they often occur in its natural environment due seasonal variations in phyto- and microzooplankton distribution.

Seawater carbonate chemistry and reproduction of the two calanoid copepods Centropages typicus and Temora longicornis in a laboratory experiment

Some planktonic groups suffer negative effects from ocean acidification (OA), although copepods might be less sensitive. We investigated the effect of predicted CO2 levels (range 480-750 ppm), on egg production and hatching success of two copepod species, Centropages typicus and Temora longicornis. In these short-term incubations there was no significant effect of high CO2 on these parameters. Additionally a very high CO2 treatment, (CO2 = 9830 ppm), representative of carbon capture and storage scenarios, resulted in a reduction of egg production rate and hatching success of C. typicus, but not T. longicornis. In conclusion, reproduction of C. typicus was more sensitive to acute elevated seawater CO2 than that of T. longicornis, but neither species was affected by exposure to CO2 levels predicted for the year 2100. The duration and seasonal timing of exposures to high pCO2, however, might have a significant effect on the reproduction success of calanoid copepods.

Levantamento preliminar de Xylariaceae da Amazônia

É apresentado um estudo de Ascomycetes (XYLARIACEAE) nos Estados do Amazonas e de Mato Grosso (norte), onde foram registrados 9 gêneros, totalizando 31 espécies: Batistia annulipes Cif., Camillea bacillum(Mont., C. bilabiata Speg., C. cyclops (Mont.) Berk. & Curt., C. labellum Mont., C. leprieurii Mont., Daldinia concentrica (Bolt.) Ces. & de Not., D. eschscholzii (Ehr.) Rehm., D. gollani Henn., Hypoxylon nummularium Bull. ex Fr, Hypoxylon sp., Kretzschmaria cetrarioides(Welw. & Curr.) Sacc., K. clavus (Fr.) Sacc., K. heliscus (Mont.) Massee, K. microspora Henn., Phylacia globosa Lév., P. poculiformis(Mont., P. surinamensis (Berk. & Curt.) Dennis, P. turbinata (Berk.) Dennis, Rhopalostroma sphaerocephalum (Petch.) D. Hwksw., Thammomyces dendroidea Cooke & Massee, T. rastratus Mont., Xylaria dealbata Berk. & Curt., X feejeensis (Berk.) Fr., X. furcata Fr., X . ianthino-velutina (Mont.) Fr., X. juruensis P. Henn., X. begeliana (Lév.) FA., X. microceras(Mont.) Fr., X. polymorpha (Pers. ex Fr. ) Grev., X. scruposa (Fr) Fr., X. telfairii (Berk.) Fr. Xylaria sp.Foi elaborada uma chave para identificação dos gêneros e respectivas espécies, sendo que para cada taxon são dadas as sinonímias e algumas ilustrações dos espécimes examinados.

Evaluación de características biológicas, productivas y ambientales que condicionan el establecimiento y el rendimiento de marcela y poleo en condiciones silvestres y de cultivo

La vegetación silvestre de la provincia de Córdoba incluye plantas medicinales y aromáticas con valor ecológico, económico, social y cultural de donde surge la importancia de su uso sustentable. La demanda de las empresas es cubierta exclusivamente por la recolección silvestre, en su mayor parte proveniente de zonas marginales para la producción agrícola-ganadera. “marcela” [Achyrocline satureioides (Lam.) DC.] y “poleo” (Lippia turbinata Griseb.) son especies nativas y crecen en sierras y llanura de Córdoba con valor medicinal y aromatizante. Hoy en día la droga cruda de marcela y poleo que se comercializa es heterogénea, condicionando la calidad y cantidad del material con uso farmacológico e industrial. Ello depende en parte del genoma de la especie, de su interacción con el ambiente, y también de las prácticas de recolección. Es por ello que la industria demanda material cultivado, genéticamente homogéneo y de establecimientos donde se apliquen buenas practicas de manejo. Nuestra hipótesis es que el resultado de la interacción del genoma de marcela y de poleo con el ambiente, el disturbio y las practicas de manejo condiciona su establecimiento y rendimiento. Ello nos permite predecir que: las variables dependientes del genoma se expresarán al crecer distintas poblaciones en un mismo ambiente, y practicas de manejo que semegen condiciones ambientales de las poblaciones silvestres de mejor rendimiento permitirán obtener mayor rendimiento en cultivo. Nuestro objetivo general es evaluar en marcela y poleo las características biológicas, productivas y ambientales que condicionan su establecimiento y rendimiento en condiciones silvestres y de cultivo. Y los específicos para marcela y poleo son: Identificar las principales variables ambientales y de disturbio asociadas a su establecimiento y rendimiento en condiciones silvestres. Establecer buenas prácticas de recolección y rendimientos de referencia en condiciones silvestres. Identificar y evaluar de poblaciones silvestres con mayor establecimiento y sobrevivencia, y menor variabilidad de rendimento en condiciones de cultivo. Caracterizar el desarrollo y la arquitectura de las poblaciones en condiciones de cultivo. Se realizarán de censos de vegetación y la caracterización del ambiente abiótico, régimen de disturbio en sierras de Comechingones y Las Peñas (Córdoba). Caracterización de poblaciones de marcela y poleo: recuento de individuos, y registro del estado fenológico, altura y cobertura, y evaluación de biomasa y fitoquímica. Mantenimiento e instalación de experimentos factoriales (origen y densidad), y caracterización del desarrollo y arquitectura de marcela y poleo. Elaboración de protocolo de recolección y propagación. Los datos serán analizados mediante técnicas uni y multivariadas. En áreas de vegetación silvestre de la serranía se espera obtener: la distribución y abundancia de estas poblaciones; rendimientos de referencia para al menos 7 poblaciones de marcela y poleo; condiciones ambientales y de disturbio relacionados con la distribución, crecimiento y rendimiento; un protocolo de buenas prácticas de recolección; y un listado, distribución y abundancia de otras especies con uso medicinal y aromático. En cultivo se espera obtener: condiciones ambientales y de manejo asociadas al establecimiento y rendimiento de referencia de al menos 5 poblaciones de marcela y 3 poblaciones de poleo; y características del desarrollo y arquitectura de las poblaciones. Los organismos públicos y privados contaran con información sobre la distribución de marcela y poleo, y de las principales variables ambientales, de disturbio, recolección y manejo que condicionan su establecimiento y rendimiento en condiciones silvestres y en cultivo. Tanto recolectores como profesionales relacionados con la domesticación, comercialización o industrialización, dispondrán de criterios biológicos y productivos de referencia para evaluar la calidad y cantidad del material y así mejorar su valor comercial.

Role of trabectedin in the treatment of soft tissue sarcoma.

Interest in marine natural products has allowed the discovery of new drugs and trabectedin (ET-743, Yondelis), derived from the marine tunicate Ecteinascidia turbinata, was approved for clinical use in 2007. It binds to the DNA minor groove leading to interferences with the intracellular transcription pathways and DNA-repair proteins. In vitro antitumor activity was demonstrated against various cancer cell lines and soft tissue sarcoma cell lines. In phase I studies tumor responses were observed also in osteosarcomas and different soft tissue sarcoma subtypes. The most common toxicities were myelosuppression and transient elevation of liver function tests, which could be reduced by dexamethasone premedication. The efficacy of trabectedin was established in three phase II studies where it was administered at 1.5 mg/m2 as a 24 h intravenous infusion repeated every three weeks, in previously treated patients. The objective response rate was 3.7%-8.3% and the tumor control rate (which included complete response, partial response and stable disease) was obtained in half of patients for a median overall survival reaching 12 months. In nonpretreated patients the overall response rate was 17%. Twenty-four percent of patients were without progression at six months. The median overall survival was almost 16 months with 72% surviving at one year. Predictive factors of response are being explored to identify patients who are most likely to respond to trabectedin. Combination with other agents are currently studied with promising results. In summary trabectedin is an active new chemotherapeutic agents that has demonstrated its role in the armamentarium of treatments for patients with sarcomas.

Efeitos do agente antiproliferativo de origem marinha ET-743 sobre o ciclo celular, apoptose e conteúdo de proteína Hsp70 em culturas de glioma humano

Ecteinascidina 743 (ET-743) é uma nova droga isolada de um tunicado marinho, a Ecteinascidia turbinata, que está na fase III dos estudos clínicos por sua marcada atividade anticâncer. Apesar de seu mecanismo de ação não estar completamente elucidado, tem sido demonstrado que a ET-743 se liga ao DNA formando adutos covalentes com o N2 da guanina. Além disso, a ET-743 tem sido relatada como potente inibidora da transcrição. No presente estudo, utilizou-se como modelo para a investigação dos efeitos antiproliferativos deste composto a linhagem celular derivada de glioblastoma humano, U-251 MG. Uma vez que o foco principal de atenção nos estudos sobre o mecanismo de ação da ET-743 esteja concentrado em suas interações com o DNA, a autora buscou avaliar outros aspectos de sua atividade antiproliferativa, quais sejam, o seu efeito sobre a distribuição das células no ciclo celular, sobre a atividade de enzimas associadas ao processo de apoptose, bem como sobre o conteúdo celular da proteína Hsp70. Em incubações de 0,5 nM por 48 h, a ET-743 causou um significante acúmulo das células na fase G2M do ciclo celular, o mesmo ocorrendo com doses mais elevadas (1,0 e 1,5) e incubações mais prolongadas (72 h). A ET-743 induziu morte celular dose-dependente e este efeito foi significativamente prevenido pelo inibidor de caspases z-VAD-fmk. Contudo, não foi observado aumento significativo nos níveis de Hsp70 após tratamento com ET-743. Considerando que alta expressão de Hsp70 é um dos principais mecanismos de proteção das células em condições de estresse, incluindo-se o tratamento com drogas citotóxicas, a não elevação de seus níveis na presença da ET-374 pode estar, ao menos em parte, relacionada à citotoxicidade produzida por este agente na linhagem estudada.

Análise da estrutura e transporte do zooplâncton no estuário do Rio Caravelas (Bahia-Brasil) através do uso do zooscan

Spatial-temporal dynamics of zooplankton in the Caravelas river estuary (Bahia, Brazil). The survey was conducted in order to describe the zooplankton community of the estuary Caravelas (Bahia, Brazil), to quantify and relate the patterns of horizontal and vertical transport with the type of tide (neap and spring) and tidal phase (flood and ebb). Zooplankton samples were collected with the aid of a suction pump (300L), filtered in plankton nets (300μm) and fixed in saline formalin 4%. Samples were collected at a fixed point (A1), near the mouth of the estuary, with samples taken at neap tides and spring tides during the dry and rainy seasons. Samples were collected for 13 hours, at intervals of 1 hour in 3 depths: surface, middle and bottom. Simultaneous collection of biological, we measured the current velocity, temperature and salinity of the water through CTD. In the laboratory, samples were selected for analysis in estereomicroscope, with 25 groups identified, with Copepoda getting the highest number of species. The 168 samples obtained from temporal samples were subsampled and processed on equipment ZooScan, with the aid of software ZooProcess at the end were generated 458.997 vingnettes. 8 taxa were identified automatically, with 16 classified as a semi-automatic. The group Copepoda, despite the limited taxonomic refinement ZooScan, obtained 2 genera and 1 species identified automatically. Among the seasons dry and wet groups Brachyura (zoea), Chaetognatha, and the Calanoid copepods (others), Temora spp., Oithona spp. and Euterpina acutifrons were those who had higher frequency of occurrence, appearing in more than 70% of the samples. Copepoda group showed the largest percentage of relative abundance in both seasons. There was no seasonal variation of total zooplankton, with an average density of 7826±4219 org.m-3 in the dry season, and 7959±3675 org.m-3 in the rainy season, neither between the types and phases of the tides, but seasonal differences were significant recorded for the main zooplankton groups. Vertical stratification was seen for the major zooplankton groups (Brachyura, Chaetognatha, Calanoida (other), Oithona spp, Temora spp. e Euterpina acutifrons). The scale of this stratification varied with the type (square or tide) and tidal phase (flood or ebb). The instantaneous transport was more influenced by current velocity, with higher values observed in spring tides to the total zooplankton, however, there was a variation of this pattern depending on the zooplankton group. According to the data import and export of total zooplankton, the outflow of organisms of the estuary was higher than the input. The results suggest that the estuary of Caravelas may influence the dynamics of organic matter to the adjacent coast, with possible consequences in National Marine Park of Abrolhos