Do pingers cause stress in fish? An experimental tank study with European sardine, Sardina pilchardus (Walbaum, 1792) (Actinopterygii, Clupeidae), exposed to a 70 kHz dolphin pinger

Date of acceptance: 06/12/2014 Acknowledgments The study was funded by the Portuguese Ministry of Science (Fundac¸a˜o para a Cieˆncia e Tecnologia– FCT) through a PhD Grant of SG (SFRH/BD/47931/2008). We would like to thank the captain of the purse-seiner (Jose´ Manuel Saveedra) and his crew for facilitating the capture and transport of live fish. Moreover, we want to thank Ana Marc¸alo for suggestions on the experimental design, Manuel Garci for technical advice on underwater video recordings and James Turner from the company Future Oceans for providing technical details on the 70 kHz dolphin pingers. We would also like to acknowledge the scientific advice of Dr. Jose´ Iglesias and the technical and logistic support for the preparation of the laboratory and the materials for tank experiments by Enrique Martı´nez Gonza´lez, Ricardo Pazo´and other staff at the aquaculture facilities of the Spanish Institute for Oceanography (IEO) and the Marine Sciences Station of Toralla (ECIMAT) in Vigo. Furthermore, we are grateful to Francisco de la Granda Grandoso for his practical assistance during the fish tank experiments and to Juan Santos Blanco for helping with statistical analysis. Finally, we would like to thank Pilar Riobo´ Agula, Amelia Fernandez Villamarin, Jose´ Franco Soler, Jose´ Luis Mun˜oz, Angela Benedetti, Marcos Antonio Lopez Patin˜o and Marta Conde Sieira for scientific advice and practical support with cortisol analysis and Rosana Rodrı´guez for preparing histological samples for us.

Feeding of larval sardine Sardina pilchardus (Walbaum) off the north coast of Spain

In April and May 1991 and between March and June 1992 data regarding the diet of larval S. pilchardus in relation to food availability was gathered. Interpretation of results is compromised by the tendency of sardine larvae to defecate their gut contents during sampling. The most common food organisms in the guts (78-89%) were the developmental stages of copepods (eggs, nauplii and copepodites). Percentage composition of copepod nauplii in the diet decreased with increasing larval size, while copepodites increased. There was no consistent relationship between food availability and feeding success, probably because feeding conditions were generally adequate.

Nuove specie per l'acquacoltura: tecniche di produzione di novellame di Sardina pilchardus

Il progetto all’interno del quale si è inserita l' attività "Sperimentare in acquacoltura il novellame di Sardina pilchardus" è il Progetto Ritmare (La Ricerca Italiana per il Mare). Il progetto Ritmare è un progetto strategico per la ricerca sul mare in Italia, che vuole coniugare le risorse ambientali del mare con l’uso connesso alle attività produttive e allo sfruttamento energetico delle sue risorse, sviluppando tecnologie ed innovazione e, al tempo stesso, promuovendone la sua conoscenza e il rispetto. In tale contesto il progetto mira a sperimentare in acquacoltura il novellame di sardina, prodotto agroalimentare tradizionalmente consumato e molto richiesto nei paesi rivieraschi del Mediterraneo. ll novellame per anni è stato pescato in modo puntuale ma per la bassissima sostenibilità e per l’impatto sugli stock adulti, la comunità europea ne ha deciso la sospensione. Il progetto vuole tentare di reintegrare il prodotto sul mercato attraverso una produzione sostenibile, evitando la perdita culturale. Saranno indagate le caratteristiche organolettiche del prodotto per promuoverne il consumo e verificate le ricadute industriali attraverso la realizzazione di un Business plan.

Análisis de bacterias patógenas en “Sardina” salada-seca (Orden Clupeiformes) procesada artesanalmente en la Bahía de Jiquilisco

En este estudio se determinaron los niveles de Staphylococcus aureus, Escherichia coli y Salmonella spp. En “sardinas” saladas-secas procesada artesanalmente en la Bahía de Jiquilísco, El Salvador; como lo dicta el Reglamento Técnico Centroamericano (RTCA) 67.04.50:08 de Alimentos. Dicho estudio fue realizado, con la finalidad de afirmar o negar la efectividad del salado como método de preservación, con respecto a la inhibición de bacterias patógenas en dicho producto (analizando “sardinas” frescas como saladas-secas). Los resultados obtenidos de un total de 15 muestras de “sardinas” frescas y 15 “sardinas” saladas-secas en los meses de abril-junio, reflejaron que con base a los niveles de Salmonella spp. (Presencia de esta bacteria), Escherichia coli (> 3NMP/gr.) detectados en el proceso artesanal de las “sardinas” la cantidad de muestras superan el límite máximo permisible requerido por el RTCA, afirmando que su calidad sanitaria no es apta para el consumo humano; aunque los niveles de Staphylococcus aureus hayan sido <102 UFC/gr. Esta contaminación fecal puede ocurrir por la falta de aplicación de las Buenas Prácticas de Higiene, que durante todo el proceso de salado y secado de las “sardinas” no se emplearon en ningún momento durante el proceso, al igual que algunos posibles factores que influyeron en estos resultados, fueron la contaminación orgánica por los desagües residuales de afluentes de zonas aledañas, por la acción antropogénica, actividades ganaderas, etc.

Analyse du compartiment mésozooplanctonique et écologie alimentaire printanière de la sardine, Sardina pilchardus (Walbaum, 1782), et de l’anchois, Engraulis encrasicolus (Linné, 1758) adultes dans le Golfe de Gascogne

Dietary studies of marine species constitute an important key to improve the understanding of its biology and of its role in the ecosystem. Thus, prey-predator relationships structure and determine population dynamics and the trophic network at the ecosystem scale. Among the major study sites, the marine ecosystem is submitted to natural and anthropogenic constraints. In the North-Eastern part of the Atlantic Ocean, the Bay of Biscay is a large open area surrounded South by Spain and East by France. This bay is an historic place of intense fishery activities for which the main small pelagic species targeted are the pilchard, Sardina pilchardus and the anchovy, Engraulis encrasicolus. The aim of this work is to analyze the trophic ecology of these two small pelagic fish in spring in the Bay of Biscay. To do this, a first section is devoted to their prey composed by the mesozooplanktonic compartment, through a two-fold approach: the characterization of their spatio-temporal dynamics during the decade 2003-2013 and the measurement of their energetic content in spring. For this season, it appears that all prey types are not worth energetically and that the Bay of Biscay represents a mosaic of dietary habitat. Moreover, the spring mesozooplankton community presents a strong spatial structuration, a temporal evolution marked by a major change in abundance and a control by the microphytoplankton biomass. The second section of this work is relative to a methodological approach of the trophic ecology of S. pilchardus and E. encrasicolus. Three different trophic tracers have been used: isotopic ratios of carbon and nitrogen, parasitological fauna and mercury contamination levels. To improve the use of the first of these trophic tracers, an experimental approach has been conducted with S. pilchardus to determine a trophic discrimination factor. Finally, it appears that the use of these three trophic tracers has always been permitted to highlight a temporal variability of the relative trophic ecology of these fish. However, no spatial dynamics could be identified through these three trophic tracers.

Knowledge-Intensive Business Processes: Proceedings of the 1st International Workshop on Knowledge-intensive Business Processes [CEUR Workshop Proceedings, Volume 861]

Nowadays, Workflow Management Systems (WfMSs) and, more generally, Process Management Systems (PMPs) are process-aware Information Systems (PAISs), are widely used to support many human organizational activities, ranging from well-understood, relatively stable and structures processes (supply chain management, postal delivery tracking, etc.) to processes that are more complicated, less structured and may exhibit a high degree of variation (health-care, emergency management, etc.). Every aspect of a business process involves a certain amount of knowledge which may be complex depending on the domain of interest. The adequate representation of this knowledge is determined by the modeling language used. Some processes behave in a way that is well understood, predictable and repeatable: the tasks are clearly delineated and the control flow is straightforward. Recent discussions, however, illustrate the increasing demand for solutions for knowledge-intensive processes, where these characteristics are less applicable. The actors involved in the conduct of a knowledge-intensive process have to deal with a high degree of uncertainty. Tasks may be hard to perform and the order in which they need to be performed may be highly variable. Modeling knowledge-intensive processes can be complex as it may be hard to capture at design-time what knowledge is available at run-time. In realistic environments, for example, actors lack important knowledge at execution time or this knowledge can become obsolete as the process progresses. Even if each actor (at some point) has perfect knowledge of the world, it may not be certain of its beliefs at later points in time, since tasks by other actors may change the world without those changes being perceived. Typically, a knowledge-intensive process cannot be adequately modeled by classical, state of the art process/workflow modeling approaches. In some respect there is a lack of maturity when it comes to capturing the semantic aspects involved, both in terms of reasoning about them. The main focus of the 1st International Workshop on Knowledge-intensive Business processes (KiBP 2012) was investigating how techniques from different fields, such as Artificial Intelligence (AI), Knowledge Representation (KR), Business Process Management (BPM), Service Oriented Computing (SOC), etc., can be combined with the aim of improving the modeling and the enactment phases of a knowledge-intensive process. The 1st International Workshop on Knowledge-intensive Business process (KiBP 2012) was held as part of the program of the 2012 Knowledge Representation & Reasoning International Conference (KR 2012) in Rome, Italy, in June 2012. The workshop was hosted by the Dipartimento di Ingegneria Informatica, Automatica e Gestionale Antonio Ruberti of Sapienza Universita di Roma, with financial support of the University, through grant 2010-C26A107CN9 TESTMED, and the EU Commission through the projects FP7-25888 Greener Buildings and FP7-257899 Smart Vortex. This volume contains the 5 papers accepted and presented at the workshop. Each paper was reviewed by three members of the internationally renowned Program Committee. In addition, a further paper was invted for inclusion in the workshop proceedings and for presentation at the workshop. There were two keynote talks, one by Marlon Dumas (Institute of Computer Science, University of Tartu, Estonia) on "Integrated Data and Process Management: Finally?" and the other by Yves Lesperance (Department of Computer Science and Engineering, York University, Canada) on "A Logic-Based Approach to Business Processes Customization" completed the scientific program. We would like to thank all the Program Committee members for the valuable work in selecting the papers, Andrea Marrella for his valuable work as publication and publicity chair of the workshop, and Carola Aiello and the consulting agency Consulta Umbria for the organization of this successful event.

Making YAWL and SmartPM interoperate : managing highly dynamic processes by exploiting automatic adaptation features

In the last years, the trade-o between exibility and sup- port has become a leading issue in work ow technology. In this paper we show how an imperative modeling approach used to de ne stable and well-understood processes can be complemented by a modeling ap- proach that enables automatic process adaptation and exploits planning techniques to deal with environmental changes and exceptions that may occur during process execution. To this end, we designed and imple- mented a Custom Service that allows the Yawl execution environment to delegate the execution of subprocesses and activities to the SmartPM execution environment, which is able to automatically adapt a process to deal with emerging changes and exceptions. We demonstrate the fea- sibility and validity of the approach by showing the design and execution of an emergency management process de ned for train derailments.

Determinación de las principales patologías reproductivas en hembras bovinas en el municipio de San Pedro de Lóvago (Chontales)

El impacto de las afecciones reproductivas disminuye enormemente la rentabilidad y crea un grave problema en la planificación estratégica en las unidades de producción de Nicaragua. Así en nuestro estudio realizado en comarcas de Sn Pedro Lovago las pérdidas se pueden presentar tanto causales como económicas. Es por eso que con la finalidad de contribuir al conocimiento de patologías reproductivas desarrollamos el estudio sobre "DETERMINACIÓN DE LAS PRINCIPALES PATOLOGÍAS REPRODUCTIVAS DE HEMBRAS BOVINAS EN EL MUNICIPIO DE SN PEDRO DE LOVAGO". Para lo que haciendo uso de registros reproductivos de las unidades de producción y con ayuda de formatos específicos, se analizó un total de 528 hembras ubicadas en cuatro comarcas (llano de los pedros , palo solo, potrero cerrado y sardina) del Municipio San Pedro de Lovago, de las cuales 78 presentaban trastornos reproductivas. Encontrándose que la patología de mayor persistencia fue la repetición de celos con un 76.9%, seguida de partos distócicos con 8% y metritis 5.1.%. Así como también entre las causas principales identificadas fueron la deficiencia de manejo y deficiencias nutricionales y al final se determinó que la comarca llano de los pedros presentó perdidas económicas de 94.541.00 córdobas (30%). De tal manera concluimos que el surgimiento y control de patologías reproductivas en las unidades de producción es de mucha importancia para mantener hatos saludables con altos índices reproductivos y que sean económicamente rentables al país.

The food of the larvae of the northern anchovy Engraulis mordax

ENGLISH: Hitherto the only investigation dealing with the food and feeding of the larvae of the northern anchovy, Engraulis mordax Girard, was that of Arthur (1956). His main consideration was, however, with the Pacific sardine, Sardinops caerulea (Girard), and his work on the anchovy can only be considered preliminary. The present investigation is a continuation of Arthur's work on the food of the larval northern anchovy. SPANISH:El único trabajo publicado hasta ahora que trata sobre el alimento y nutrición de las larvas de la anchoa norteña, Engraulis mordax Girard, es el de Arthur (1956); pero su objeto principal fué la sardina del Pacifico, Sardinops caendea (Girard), y el estudio dedicado a la anchoa solo puede considerarse como preliminar. La presente investigación es una continuación del estudio de Arthur sobre el alimento de las larvas de la anchoa norteña.

Fecundity of the anchoveta (Cetengraulis mysticetus) in the Gulf of Panama

ENGLISH: One aspect of the work of the Inter-American Tropical Tuna Commission is to investigate the biology, life history, and ecology of the anchoveta (Cetengraulis mysticetus) to make possible an understanding of the effects of the fishery on this species. While the catch per standard day's baiting has been used as a measure of the apparent abundance of anchovetas in the Gulf of Panama (Alverson and Shimada, 1957), it would be desirable to have an independent measure of population abundance. One such estimate can be obtained by a knowledge of the fecundity and sex ratio, together with the total annual egg production of this species. This method is one of those used routinely by the U. S. Bureau of Commercial Fisheries to estimate the size of the spawning population of the Pacific sardine, Sardinops caerulea (California Cooperative Research Program, Progress Report, 1 January 1951 to 30 June 1952). While the purpose of the present paper is to provide information about the fecundity of the anchoveta, nothing is known yet of the total annual egg production of this species although Simpson (1959) has provided much of the information (identification of the anchoveta egg, time of spawning, delimitation of the spawning area) which would be necessary as a basis for enumerating anchoveta eggs in the spawning area of the Gulf of Panama. SPANISH: Un aspecto del trabajo de la Comisión Interamericana del Atún Tropical es la investigación de la biología, historia natural y ecología de la anchoveta (Cetengraulis mysticetus) para que sea posible entender los efectos de la pesquería sobre esta especie. Aunque se ha venido usando la pesca de carnada por día estándar de actividad como una medida de la abundancia aparente de las anchovetas en el Golfo de Panamá (Alverson y Shimada, 1957), sería deseable tener una medida independiente de la abundancia de la población. Una estimación de esta naturaleza puede obtenerse por el conocimiento de la fecundidad de la razón de los sexos, junto con la producción total anual de huevos de esta especie. Este método es uno de los empleados rutinariamente por el Bureau of Commercial Fisheries de los Estados Unidos para estimar el tamaño de la población reproductora de la sardina del Pacífico, Sardinops caerulea (California Cooperative Research Program, Progress Report, 1 January 1951 to 30 June 1952). Aunque el propósito del presente trabajo es el de proveer información sobre la fecundidad de la anchoveta, nada se sabe todavía sobre la producción total anual de huevos de esta especie, a pesar de que Simpson (1959) ha proporcionado abundante información identificación del huevo de la anchoveta, tiempo del desove, delimitación de las áreas de desove) necesaria como una base para medir la producción de huevos de la anchoveta en el área de desove del Golfo de Panamá.

18S rRNA V9 metabarcoding for diet characterization: a critical evaluation with two sympatric zooplanktivorous fish species

The potential of the 18S rRNA V9 metabarcoding approach for diet assessment was explored using MiSeq paired-end (PE; 2 9 150 bp) technology. To critically evaluate the method's performance with degraded/digested DNA, the diets of two zooplanktivorous fish species from the Bay of Biscay, European sardine (Sardina pilchardus) and European sprat (Sprattus sprattus), were analysed. The taxonomic resolution and quantitative potential of the 18S V9 metabarcoding was first assessed both in silico and with mock and field plankton samples. Our method was capable of discriminating species within the reference database in a reliable way providing there was at least one variable position in the 18S V9 region. Furthermore, it successfully discriminated diet between both fish species, including habitat and diel differences among sardines, overcoming some of the limitations of traditional visual-based diet analysis methods. The high sensitivity and semi-quantitative nature of the 18S V9 metabarcoding approach was supported by both visual microscopy and qPCR-based results. This molecular approach provides an alternative cost and time effective tool for food-web analysis.

Can the Continuous Plankton Recorder (CPR) be used to infer sardine diet?

Knowledge on the impact of climate variability in the diet of planktivorous fish is limited by the laborious work involved in stomach content analysis, impractical for large scale studies. Routine measurements of plankton such as the Continuous Plankton Recorder (CPR) survey provide valuable information of the temporal variation of phyto- and zooplankton prey availability for higher trophic levels. Sardines are a world-wide distributed and commercially important planktivorous fish, at the basis of the pelagic marine food web. Being predominantly non-selective filter-feeders, their diets closely correspond to the water plankton species and a significant relationship was recently found between Sardina pilchardus feeding intensity and remotely sensed chlorophyll alpha . Data of sardine stomach prey composition and CPR were obtained during 2003 for the same location off the west coast of Portugal, an area characterised by strong seasonality of plankton abundance and composition, mainly governed by upwelling events. Phyto- and zooplankton prey in sardine stomachs were identified to the lowest possible taxa and their numerical and volumetric abundance was registered, as well as their contribution to the prey carbon content. The seasonal variation of the abundance and composition of sardine diet was then compared to the abundance and composition of the water plankton obtained with the CPR at the same time and for the same area where the fish were collected, in order to evaluate if CPR data can be used to proxy sardine prey availability and diet composition at large temporal scales.

Climate variability drives anchovies and sardines into the North and Baltic Seas

European anchovy (Engraulis encrasicolus) and sardine (Sardina pilchardus) are southern, warm water species that prefer temperatures warmer than those found in boreal waters. After about 40 years of absence, they were again observed in the 1990s in increasing quantities in the North Sea and the Baltic Sea. Whereas global warming probably played a role in these northward migrations, the North Atlantic Oscillation (NAO), the Atlantic Multidecadal Oscillation (AMO) and the contraction of the subpolar gyre were important influences. Sardine re-invaded the North Sea around 1990, probably mainly as a response to warmer temperatures associated with the strengthening of the NAO in the late 1980s. However, increasing numbers of anchovy eggs, larvae, juveniles and adults have been recorded only since the mid-1990s, when, particularly, summer temperatures started to increase. This is probably a result of the complex dynamics of ocean–atmosphere coupling involving changes in North Atlantic current structures, such as the contraction of the subpolar gyre, and dynamics of AMO. Apparently, climate variability drives anchovies and sardines into the North and Baltic Seas. Here, we elucidate the climatic background of the return of anchovies and sardines to the northern European shelf seas and the changes in the North Sea fish community in the mid-1990s in response to climate variability.

Interacções tróficas entre sardinha (S. pilchardus) e cavala (S. colias)

A sardinha Ibero-Atlântica (Sardina pilchardus) e a cavala (Scomber colias) são importantes espécies pelágicas dos ecossistemas marinhos do Atlântico, quer do ponto de vista ecológico, quer do ponto de vista económico. Esta tese tem por objectivo estudar a alimentação de sardinha e de cavala e possíveis interacções tróficas entre ambas as espécies visto que estas partilham espaço e recursos alimentares. Estudou-se a dieta das duas espécies, capturadas na costa sul portuguesa entre Junho e Setembro, através da análise de presas nos conteúdos estomacais. Verificou-se que as principais presas nas suas dietas foram crustáceos (maioritariamente copépodes) pertencentes aos mesmos grupos taxonómicos, não se tendo verificado uma partição do zooplâncton com base no tamanho para as duas espécies. Os dados obtidos apontaram para a existência de uma sobreposição das dietas e potencial para competição. A sardinha apresentou um coeficiente de vacuidade elevado que foi mais acentuado quando em presença da cavala e observou-se a existência de uma alteração na dieta de cavala passando a alimentar-se de itens de maiores dimensões à medida que aumentava de tamanho. Os resultados constatam a existência provável de interacções tróficas entre estas duas espécies, sardinha e cavala.

Analysis of polycyclic aromatic hydrocarbons in fish: evaluation of a quick, easy, cheap, effective, rugged, and safe extraction method

QuEChERS method was evaluated for extraction of 16 PAHs from fish samples. For a selective measurement of the compounds, extracts were analysed by LC with fluorescence detection. The overall analytical procedure was validated by systematic recovery experiments at three levels and by using the standard reference material SRM 2977 (mussel tissue). The targeted contaminants, except naphthalene and acenaphthene, were successfully extracted from SRM 2977 with recoveries ranging from 63.5–110.0% with variation coefficients not exceeding 8%. The optimum QuEChERS conditions were the following: 5 g of homogenised fish sample, 10 mL of ACN, agitation performed by vortex during 3 min. Quantification limits ranging from 0.12– 1.90 ng/g wet weight (0.30–4.70 µg/L) were obtained. The optimized methodology was applied to assess the safety concerning PAHs contents of horse mackerel (Trachurus trachurus), chub mackerel (Scomber japonicus), sardine (Sardina pilchardus) and farmed seabass (Dicentrarchus labrax). Although benzo(a)pyrene, the marker used for evaluating the carcinogenic risk of PAHs in food, was not detected in the analysed samples (89 individuals corresponding to 27 homogenized samples), the overall mean concentration ranged from 2.52 l 1.20 ng/g in horse mackerel to 14.6 ± 2.8 ng/ g in farmed seabass. Significant differences were found between the mean PAHs concentrations of the four groups.