Spatial Distribution of Seropositive Dogs to Leptospira spp. and Evaluation of Leptospirosis Risk Factors Using a Decision Tree

Background: Leptospirosis is an important zoonotic disease associated with poor areas of urban settings of developing countries and early diagnosis and prompt treatment may prevent disease. Although rodents are reportedly considered the main reservoirs of leptospirosis, dogs may develop the disease, may become asymptomatic carriers and may be used as sentinels for disease epidemiology. The use of Geographical Information Systems (GIS) combined with spatial analysis techniques allows the mapping of the disease and the identification and assessment of health risk factors. Besides the use of GIS and spatial analysis, the technique of data mining, decision tree, can provide a great potential to find a pattern in the behavior of the variables that determine the occurrence of leptospirosis. The objective of the present study was to apply Geographical Information Systems and data prospection (decision tree) to evaluate the risk factors for canine leptospirosis in an area of Curitiba, PR.Materials, Methods & Results: The present study was performed on the Vila Pantanal, a urban poor community in the city of Curitiba. A total of 287 dog blood samples were randomly obtained house-by-house in a two-day sampling on January 2010. In addition, a questionnaire was applied to owners at the time of sampling. Geographical coordinates related to each household of tested dog were obtained using a Global Positioning System (GPS) for mapping the spatial distribution of reagent and non-reagent dogs to leptospirosis. For the decision tree, risk factors included results of microagglutination test (MAT) from the serum of dogs, previous disease on the household, contact with rats or other dogs, dog breed, outdoors access, feeding, trash around house or backyard, open sewer proximity and flooding. A total of 189 samples (about 2/3 of overall samples) were randomly selected for the training file and consequent decision rules. The remained 98 samples were used for the testing file. The seroprevalence showed a pattern of spatial distribution that involved all the Pantanal area, without agglomeration of reagent animals. In relation to data mining, from 189 samples used in decision tree, a total of 165 (87.3%) animal samples were correctly classified, generating a Kappa index of 0.413. A total of 154 out of 159 (96.8%) samples were considered non-reagent and were correctly classified and only 5/159 (3.2%) were wrongly identified. on the other hand, only 11 (36.7%) reagent samples were correctly classified, with 19 (63.3%) samples failing diagnosis.Discussion: The spatial distribution that involved all the Pantanal area showed that all the animals in the area are at risk of contamination by Leptospira spp. Although most samples had been classified correctly by the decision tree, a degree of difficulty of separability related to seropositive animals was observed, with only 36.7% of the samples classified correctly. This can occur due to the fact of seronegative animals number is superior to the number of seropositive ones, taking the differences in the pattern of variable behavior. The data mining helped to evaluate the most important risk factors for leptospirosis in an urban poor community of Curitiba. The variables selected by decision tree reflected the important factors about the existence of the disease (default of sewer, presence of rats and rubbish and dogs with free access to street). The analyses showed the multifactorial character of the epidemiology of canine leptospirosis.

Análise multicritérios na definição de áreas prioritárias à conectividade entre fragmentos florestais

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Comparação entre dois sistemas de informação geográfica (ARCGIS e GVSIG) na elaboração de um mapa de potencialidade para a silvicultura baseado em elementos do meio físico: a bacia do Paraíba do Sul (Porção Paulista)

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Geoprocessamento aplicado na distribuição espacial da capacidade do uso na microbacia do Córrego dos Rochas, Avaré (SP)

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Extração automática de contornos de telhados de edifícios em um modelo digital de elevação, utilizando inferência Bayesiana e campos aleatórios de Markov

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Ecologia molecular de fungos patogênicos onygenales em animais silvestres do interior do estado de São Paulo

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Variabilidade do índice de vegetação por diferença normalizada (NDVI) em áreas reflorestamento: floresta estadual Edmundo Navarro de Andrade (FEENA)/Rio Claro (SP)

Pós-graduação em Geociências e Meio Ambiente - IGCE

Mapeamento das fundações mais usadas na cidade de Belém-PA: aspectos gerais e proposta preliminar de mapeamento de soluções utilizadas em casos recentes

Realiza o levantamento dos vários tipos de fundações mais comumente utilizadas na construção civil, nas últimas décadas na cidade de Belém PA, definindo suas propriedades, peculiaridades, aspectos técnicos de seu dimensionamento, capacidade de carga e processo executivo. Identifica o tipo de solo, em que estão assentes, com respectivos perfil e características geotécnicas e efetua o mapeamento da cidade por regiões, de acordo com perfil geológico; tipo de fundação; profundidade de assentamento; processo executivo; e custo relativo. O trabalho é dividido em quatro etapas: a primeira correspondente à pesquisa bibliográfica a respeito do estudo das fundações, abrangendo desenvolvimento histórico das fundações e mecânica dos solos, no mundo, Brasil e Belém; pesquisa geotécnica e características do solo de Belém e; estudo dos Sistemas de Informações Geográficas SIG,; a segunda envolvendo levantamento técnico junto as empresas construtoras e firmas de projetos locais, para catalogação e formação de um banco de dados acerca das fundações praticadas na cidade; a terceira relativa a ordenação e análise técnica dos dados coletados e a quarta, consiste na redação do texto final e na elaboração de mapas da cidade, baseados em Sistema de Informação Geográfica - SIG, em escala 1:10.000, concernentes ao tipo de fundação; o perfil geotécnico do terreno; o tipo de solo e processo executivo; profundidade provável para a fundação e, o custo relativo da fundação em relação ao total da obra.

Zoneamento ecológico econômico do município de Altinópolis, SP

Pós-graduação em Agronomia (Ciência do Solo) - FCAV

An evaluation of the distributions of polychlorinated biphenyls and organic matter in coastal sediments

The objective of this thesis is to improve the understanding of what processes and mechanism affects the distribution of polychlorinated biphenyls (PCBs) and organic carbon in coastal sediments. Because of the strong association of hydrophobic organic contaminants (HOCs) such as PCBs with organic matter in the aquatic environment, these two entities are naturally linked. The coastal environment is the most complex and dynamic part of the ocean when it comes to both cycling of organic matter and HOCs. This environment is characterised by the largest fluxes and most diverse sources of both entities. A wide array of methods was used to study these processes throughout this thesis. In the field sites in the Stockholm archipelago of the Baltic proper, bottom sediments and settling particulate matter were retrieved using sediment coring devices and sediment traps from morphometrically and seismically well-characterized locations. In the laboratory, the samples have been analysed for PCBs, stable carbon isotope ratios, carbon-nitrogen atom ratios as well as standard sediment properties. From the fieldwork in the Stockholm Archipelago and the following laboratory work it was concluded that the inner Stockholm archipelago has a low (≈ 4%) trapping efficiency for freshwater-derived organic carbon. The corollary is a large potential for long-range waterborne transport of OC and OC-associated nutrients and hydrophobic organic pollutants from urban Stockholm to more pristine offshore Baltic Sea ecosystems. Theoretical work has been carried out using Geographical Information Systems (GIS) and statistical methods on a database of 4214 individual sediment samples, each with reported individual PCB congener concentrations. From this work it was concluded that the continental shelf sediments are key global inventories and ultimate sinks of PCBs. Depending on congener, 10-80% of the cumulative historical emissions to the environment are accounted for in continental shelf sediments. Further it was concluded that the many infamous and highly contaminated surface sediments of urban harbours and estuaries of contaminated rivers cannot be of importance as a secondary source to sustain the concentrations observed in remote sediments. Of the global shelf PCB inventory < 1% are in sediments near population centres while ≥ 90% is in remote areas (> 10 km from any dwellings). The remote sub-basin of the North Atlantic Ocean contains approximately half of the global shelf sediment inventory for most of the PCBs studied.

Neo-Assyrian concepts of fortification

The major cities of the Neo-Assyrian Empire were not only home to impressive palaces and temples, but they were also equipped with strong fortifications. The city walls were not only meant to keep out potential enemies, but by demonstrating Assyria’s power to any approaching person, they served an ideological purpose, as well. However, military efficiency was just as crucial, since, over its entire history, the empire repeatedly faced internal and external threats and could not have afforded to lose any of its urban centers which were essential to maintaining control over the various provinces or geographic regions associated with them. The study of Neo-Assyrian fortifications relies on evidence provided by archaeological excavations, the study of Assyrian reliefs and information from cuneiform texts. Even though these sources help us reconstruct the appearance of the town defenses, the question of why the individual fortification systems were built in a specific way cannot be addressed by these means alone. Remote sensing offers an opportunity to view the course and placement of the city walls within their topographical context. Furthermore, geographical information systems (GIS) offer a tool to illustrate the distribution of the strongly fortified Assyrian towns, thereby allowing us to recognize patterns and functions of regional fortification systems during the Neo-Assyrian period.

Objective assessment of the built environment and its relationship to physical activity and obesity

The role of physical activity in the promotion of individual and population health has been well documented in research and policy publications. Significant research activities have produced compelling evidence for the support of the positive association between physical activity and improved health. Despite the knowledge about these public health benefits of physical activity, over half of US adults do not engage in physical activity at levels consistent with public health recommendations. Just as physical inactivity is of significant public health concern in the US, the prevalence of obesity (and its attendant co-morbidities) is also increasing among US adults.^ Research suggests racial and ethnic disparities relevant to physical inactivity and obesity in the US. Various studies have shown more favorable outcomes among non-Hispanic whites when compared to other minority groups as far as physical activity and obesity are concerned. The health disparity issue is especially important because Mexican-Americans who are the fastest growing segment of the US population are disproportionately affected by physical inactivity and obesity by a significant margin (when compared to non-Hispanic whites), so addressing the physical inactivity and obesity issues in this group is of significant public health concern. ^ Although the evidence for health benefits of physical activity is substantial, various research questions remain on the potential motivators for engaging in physical activity. One area of emerging interest is the potential role that the built environment may play in facilitating or inhibiting physical activity.^ In this study, based on an ongoing research project of the Department of Epidemiology at the University of Texas M. D. Anderson Cancer Center, we examined the built environment, measured objectively through the use of geographical information systems (GIS), and its association with physical activity and obesity among a cohort of Mexican- Americans living in Harris County, Texas. The overall study hypothesis was that residing in dense and highly connected neighborhoods with mixed land-use is associated with residents’ increased participation in physical activity and lowered prevalence of obesity. We completed the following specific aims: (1) to generate a land-use profile of the study area and create a “walkability index” measure for each block group within the study area; (2) to compare the level of engagement in physical activity between study participants that reside in high walkability index block groups and those from low walkability block groups; (3) to compare the prevalence of obesity between study participants that reside in high walkability index block groups and those from low walkability block groups. ^ We successfully created the walkability index as a form of objective measure of the built environment for portions of Harris County, Texas. We used a variety of spatial and non-spatial dataset to generate the so called walkability index. We are not aware of previous scholastic work of this kind (construction of walkability index) in the Houston area. Our findings from the assessment of relationships among walkability index, physical activity and obesity suggest the following, that: (1) that attempts to convert people to being walkers through health promotion activities may be much easier in high-walkability neighborhoods, and very hard in low-walkability neighborhoods. Therefore, health promotion activities to get people to be active may require supportive environment, walkable in this case, and may not succeed otherwise; and (2) Overall, among individuals with less education, those in the high walkability index areas may be less obese (extreme) than those in the low walkability area. To the extent that this association can be substantiated, we – public health practitioners, urban designers, and policy experts – we may need to start thinking about ways to “retrofit” existing urban forms to conform to more walkable neighborhoods. Also, in this population especially, there may be the need to focus special attention on those with lower educational attainment.^

Uso innovador de un SIG en la logística de productos forestales

El costo del transporte de los productos forestales reviste gran importancia en la rentabilidad de la actividad, incidiendo directamente en el precio percibido por el productor. Ante esta situación sería de utilidad, para el productor y para el transportista, conocer cuál sería el recorrido óptimo desde el lugar de partida (ej. lote del productor) hasta el lugar de destino (ej. acopiador). En consecuencia, se propone comprobar la factibilidad de utilizar el entorno de los Sistemas de Información Geográfica (SIG) en la determinación, de manera rápida y con exactitud, del camino óptimo entre un lote forestal y el aserradero.

Enseñanza de la geografía e Informática : El uso del SIG en una experiencia pedagógica innovadora

El presente trabajo da cuenta de una experiencia pedagógica innovadora realizada en el marco del Convenio DINIECE, MECYT - FAHCE, UNLP. Plantea la utilización de los Sistemas de Información Geográfica (SIG) con fines pedagógicos. Dicha experiencia se llevó a cabo en el curso "Seminario de Itinerarios Urbanos" en el Colegio Nacional "Rafael Hernández" de la UNLP. Partiendo de una concepción crítica desde la Geografía y desde la Didáctica, se incentivó a los alumnos/as a comprender la realidad socio-ambiental en la cual están inmersos. Para ello se identificaron, desde el análisis territorial y espacial, problemáticas ambientales en el partido de La Plata. Los alumnos/as vivenciaron y experimentaron una forma de trabajo en la que la innovación estuvo dada por la utilización de nuevas tecnologías -SIG- en consonancia con una metodología didáctica que fomenta aprendizajes significativos.

Enseñanza de la geografía e Informática : El uso del SIG en una experiencia pedagógica innovadora

El presente trabajo da cuenta de una experiencia pedagógica innovadora realizada en el marco del Convenio DINIECE, MECYT - FAHCE, UNLP. Plantea la utilización de los Sistemas de Información Geográfica (SIG) con fines pedagógicos. Dicha experiencia se llevó a cabo en el curso "Seminario de Itinerarios Urbanos" en el Colegio Nacional "Rafael Hernández" de la UNLP. Partiendo de una concepción crítica desde la Geografía y desde la Didáctica, se incentivó a los alumnos/as a comprender la realidad socio-ambiental en la cual están inmersos. Para ello se identificaron, desde el análisis territorial y espacial, problemáticas ambientales en el partido de La Plata. Los alumnos/as vivenciaron y experimentaron una forma de trabajo en la que la innovación estuvo dada por la utilización de nuevas tecnologías -SIG- en consonancia con una metodología didáctica que fomenta aprendizajes significativos.