Presencia del olmo temblón o negrillo, Ulmus laevis Pall. en Ibi (Alicante, Comunidad Valenciana)

Se ha localizado en la Rambla de la Gavarnera en Ibi, Alicante una pequeña población de Ulmus laevis Pall., que no había sido citado expresamente en localidades valencianas, ni en las floras locales, regionales, ni nacionales, en unos casos por no haberse localizado, en otros por considerar a este árbol alóctono en España. Desde hace una década un equipo de la ETSIA de Montes de la Universidad Politécnica de Madrid, viene realizando diversos proyectos y tesis doctorales que han dado como resultado la puesta en valor de esta especie, a través de su localización a nivel nacional, estudio ecológico, fisiológico y genético, que arrojan numerosas pruebas a favor de la autoctonía de esta especie en España. Según los autores de este dilatado proyecto, U. laevis habría tenido en España uno de su principales refugios cuaternarios, aunque en la actualidad se encuentre fragmentado en poblaciones dispersas, con pocos individuos y problemas para su conservación y supervivencia. No obstante esta especie ha demostrado mayores tasas de supervivencia a la enfermedad de los olmos, que otros de sus congéneres como Ulmus minor y U. glabra. En cuanto a su presencia en Alicante, son precisamente estos autores los que localizan un primer ejemplar en Ibi, al que ahora añadimos dos ejemplares más repartidos en tres puntos muy próximos y situados a lo largo de la Rambla de la Gavarnera. Este es un cauce irregular pero con nivel freático permanente, como lo atestiguan la existencia de pozos, azudes, albercas que abastecieron a los pequeños regadíos de la zona, muchos de ellos abandonados en la actualidad. Dada la rareza de esta especie a nivel nacional y la excepcionalidad de su presencia en Ibi, consideramos que el ejemplar de mayor porte merece la consideración de árbol singular para la Comunidad Valenciana y por otra parte, los otros ejemplares merecen su protección y multiplicación, para incrementar la población existente. Es necesario desarrollar un mayor esfuerzo de localización en este paraje y zonas próximas de la Comarca, para conocer su potencial distribución en la provincia y determinar un estatus de protección adecuado.

The sciatic nerve of the toad Xenopus laevis as a physiological model of the human cochlear nerve

The response of single fibres of the human cochlear nerve to electrical stimulation by a cochlear implant has previously been inferred from the response of the cochlear nerve in other mammals. These experiments are hindered by stimulus artefact and the range of stimulus currents used is therefore much less than the perceptual dynamic range (from threshold to discomfort) of human subjects. We have investigated use of the sciatic nerve of the toad Xenopus laevis as a convenient physiological model of the human cochlear nerve. Use of this completely dissected nerve reduces the problems of stimulus artefact whilst maintaining the advantages of a physiological preparation. The validity of the model was assessed by measuring the refractory periods, excitation time-constant, and relative spread of single fibres using microelectrode recording. We have also investigated the response of nerve fibres to sinusoidal stimulation. Based on these measurements, we propose that the sciatic nerve may be a suitable model of the human cochlear nerve if the timescales of stimuli are decreased by a factor of about five to compensate for the slower dynamics of the sciatic nerve and if noise is added to the stimuli to compensate for the lower internal noise of sciatic nerve fibres.

Role of Ptf1a in the development of endocrine and exocrine pancreas of Xenopus laevis embryos

Mémoire numérisé par la Direction des bibliothèques de l'Université de Montréal.

Role of Ptf1a in the development of endocrine and exocrine pancreas of Xenopus laevis embryos

Mémoire numérisé par la Direction des bibliothèques de l'Université de Montréal.

A one-tube fluorescent assay for the quarantine detection and identification of Tilletia indica and other grass bunts in wheat

A molecular assay with enhanced specificity and sensitivity has been developed to assist in the surveillance of Karnal bunt, a quarantineable disease with a significant impact on international trade. The protocol involves the release of DNA from spores, PCR amplification to enrich Tilletia-specific templates from released DNA and a five-plex, real-time PCR assay to detect, identify and distinguish T. indica and other Tilletia species (T. walkeri, T. ehrhartae, T. horrida and a group comprising T. caries, T. laevis, T. contraversa, T. bromi and T. fusca) in wheat grains. This fluorescent molecular tool has a detection sensitivity of one spore and thus bypasses the germination step, which in the current protocol is required for confirmation when only a few spores have been found in grain samples. The assay contains five dual-labelled, species-specific probes and associated species-specific primer pairs in a PCR mix in one tube. The different amplification products are detected simultaneously by five different fluorescence spectra. This specific and sensitive assay with reduced labour and reagent requirements makes it an effective and economically sustainable tool to be used in a Karnal bunt surveillance program. This protocol will also be valuable for the identification of some contaminant Tilletia sp. in wheat grains.

Fisheries Queensland Long Term Monitoring Program Underwater Visual Census of twenty-four reefs on the Great Barrier Reef between 1999 and 2004.

In 1999, the Department of Employment, Economic Development and Innovation (DEEDI), Fisheries Queensland undertook a new initiative to collect long term monitoring data of various important stocks including reef fish. This data and monitoring manual for the reef fish component of that program which was based on Underwater Visual Census methodology of 24 reefs on the Great Barrier Reef between 1999 and 2004. Data was collected using six 50m x 5m transects at 4 sites on 24 reefs. Benthic cover type was also recorded for 10m of each transect. The attached Access Database contains 5 tables being: SITE DETAILS TABLE Survey year Data entry complete REF survey site ID Site # (1-4) Location (reef name) Site Date (date surveyed) Observer 1 (3 initials to identify who estimated fish lengths and recorded benthic cover) TRANSECT DETAILS Survey ID Transect Number (1-6) Time (the transect was surveyed) Visibility (in metres) Minimum Depth surveyed (m) Maximum Depth surveyed (m) Percent of survey completed (%) Comments SUBSTRATE Survey ID Transect Number (1-6) then % cover of each of eth following categories of benthic cover types Dead Coral Live Coral Soft Coral Rubble Sand Sponge Algae Sea Grass Other COORDINATES (over survey sites) from -14 38.792 to -19 44.233 and from 145 21.507 to 149 55.515 SIGHTINGS ID Survey ID Transect Number (1-6) CAAB Code Scientific Name Reef Fish Length (estimated Fork Length of fish; -1 = unknown or not recorded) Outside Transect (if a fish was observed outside a transect -1 was recorded) Morph Code (F = footballer morph for Plectropomus laevis, S = Spawning colour morph displayed)

Monimuotoisuudelle arvokkaat ontot puut kaupunkialueilla – onttojen runkojen esiintymistodennäköisyyteen vaikuttavat tekijät

Tutkimuksen tavoitteena oli selvittää lahosta puuaineesta riippuvaiselle lajistolle tärkeiden onttojen puiden ominaisuuksien vaikutusta pääkaupunkiseudun jalojen puistopuiden onttouden esiintymistodennäköisyyteen. Tutkimuksessa mitattavia ominaisuuksia olivat puiden läpimitta, puulaji, pituus sekä kasvupaikan valoisuus ja metsäisyys. Tutkittavia puulajeja olivat lehmus (Tilia cordata), vaahtera (Acer platanoides), tammi (Quercus robur), saarni (Fraxinus excelsior) ja jalavat (Ulmus glabra ja U. laevis). Tutkimuskohteina olivat pääkaupunkiseudulla sijaitsevat 14 viheraluetta, jotka vaihtelivat metsäisistä puustokeskittymistä valoisiin ja intensiivisesti hoidettuihin puistoihin. Onttouden esiintymisen riippuvuutta muista muuttujista tutkittiin korrelaatioanalyysillä sekä logistisilla regressioanalyyseillä, joissa huomioitiin myös puiden jakaantuminen viheraluiden välillä. Puulajilla ja puun läpimitalla oli vaikutusta onttouden esiintymistodennäköisyyteen. Kasvupaikan valoisuudella oli merkitystä rungon onttoutumisessa ainakin lehmukselle ja vaahteralle. Metsäisyys liittyy valoisuuteen ja näiden muuttujien vaikutus rungon onttoutumistodennäköisyyteen on kietoutunut toisiinsa. Pituudella ei todennäköisesti ollut merkitystä onttoutumiseen. Tulosten perusteella etenkin pääkaupunkiseudun lehmukset sekä vaahterat ovat herkkiä onttoutumaan ja täten ne muodostavat monimuotoisia elinympäristöjä. Valoisuuden ja metsäisyyden vaikutus onttoutumiseen on vahvasti sidoksissa puiden hoitoon ja hoitotoimilla on siis suuri vaikutus onkaloiden syntyyn.

Observaciones sobre las especies de truchas criollas.

The genus Percichthys (Serranidae) includes three nominal species in Argentina, trucha, vinciguerrae and altispinis. The authors of this paper examine materials from: 1: the Río Negro river in its inferior course, in front of Viedma; 2: lake Pellegrini, near Neuquén, where the rivers Neuquén and Limay meet and form the Negro; 3: Plottier, near the place just named; 4: Colorado river, in Fortín Uno; 5: Curacó river, a tributary to the Colorado, now cut into separate sections since years ago on account of the lack of water; this river normally would connect the Colorado with the rivers up to the San Juan where the « trucha » lives; 6: Luro or La Salada lagoon, formed by the Colorado river near its mouth; 7: Argentino lake, in the southern Patagonia. These fishes are known as « trucha criolla » or « native trout » although the old Spanish name was « perca », more appropiate. Percichthys altispinis Regan 1905 is a good species ; it has been re-found in the Colorado river, at Fortín Uno. An illustration of it is given, characters of four specimens and a note on its scales. P. trucha C. V. reveeals itself on close examination as a complex species or linnean species (linneon) ; with several combinations of characters, but even more materials are needed to establish if there are geographical races (subspecies). A new examination of the Chilean materials is required (former authors considered them jointly with the Atlantic versant or Argentine materials). Some of the infraspeciíic forms are prognathous, and low finned ; others, the contrary; the head may be normal, or conical and bony; etc. As to P. vinciguerrae its standing as a valid species is doubtfull; perhaps, with P. laevis Jenyns it is a southern form. In the same reduced habitat (lagoon, or isolated course) diversified forms are present; some show parallelism with those of other places ; it is supposed that they show ecological influences according to the year or season of birth or developpment. A thorough study of the scales is given, with epidological characteristics and general conciusions as to the method of measuring and comparing their « reading». There are some marked differences even in the same habitat.

Investigations of Pyrrole-Imidazole Polyamide Effects on DNA Replication

Pyrrole–Imidazole polyamides are programmable, cell-permeable small molecules that bind in the minor groove of double-stranded DNA sequence-specifically. Polyamide binding has been shown to alter the local helical structure of DNA, disrupt protein-DNA interactions, and modulate endogenous gene expression. Py–Im polyamides targeted to the androgen receptor-DNA interface have been observed to decrease expression of androgen-regulated genes, upregulate p53, and induce apoptosis in a hormone-sensitive prostate cancer cell line. Here we report that androgen response element (ARE)-targeted polyamides induced DNA replication stress in a hormone-insensitive prostate cancer cell line. The ATR checkpoint kinase was activated in response to this stress, causing phosphorylation of MCM2, and FANCD2 was monoubiquitinated. Surprisingly, little single-stranded DNA was exhibited, and the ATR targets RPA2 and Chk1 were not phosphorylated. We conclude that polyamide induces relatively low level replication stress, and suggest inhibition of the replicative helicase as a putative mechanism based on in vitro assays. We also demonstrate polyamide-induced inhibition of DNA replication in cell free extracts from X. laevis oocytes. In this system, inhibition of chromatin decondensation is observed, preventing DNA replication initiation. Finally, we show that Py-Im polyamides targeted to the ARE and ETS binding sequence downregulate AR- and ERG-driven signaling in a prostate cancer cell line harboring the TMPRSS2-ERG fusion. In a mouse xenograft model, ARE-targeted polyamide treatment reduced growth of the tumor.

Palaeoenvironmental analysis based on alluvial ostracod assemblages of the Cenicero section (lower Miocene, NW Ebro Basin)

In this work we perform for the first time a palaeoenvironmental and biostratigraphic analysis of the lower Miocene alluvial deposits of the Cenicero section (NW sector of the Ebro Basin; N Iberian Peninsula), based on the ostracod and micromammal assemblages. One of the main characteristics of this section is the unusual abundance on non-reworked ostracods present in the studied samples compared to other European sequences of similar age and sedimentary environment. This fact has allowed us to develop precise palaeoenvironmental reconstructions. The variations of the identified ostracod assemblages, defined by species such as Cyclocypris laevis, Ilyocypris bradyi, Ilyocypris gibba, Limnocythere sp. or Pseudocandona parallela, record the development of small, ephemeral and shallow ponds in a distal alluvial and/or floodplain environment. Towards the upper part of the section the ponds appear to be less ephemeral, being the aquatic systems more stable for ostracods development. Variations in the water temperature and salinity have been observed along the section, which are related to changes in the local pluviometric regime. On the other hand, the presence of micromammals in one of the studied samples has allowed the precise dating of this section. Thus, the presence of Armantomys daamsi dates the Cenicero section as Agenian (lower Miocene), local zone Y2 (MN2).

非洲爪蟾血清白蛋白的分离纯化及胰蛋白酶抑制活性

通过凝胶过滤层析及两步阴离子交换层析, 从非洲爪蟾( Xenopus laevis ) 的血清中获得了其68 kDa 的血清白蛋白。与大蹼铃蟾血清白蛋白相似, 非洲爪蟾血清白蛋白也具有抑制胰蛋白酶的活性, 但其抑制活力 相对较低, 180 nmol/L 的非洲爪蟾血清白蛋白能抑制84 %的胰蛋白酶活性(30 nmol/L) 。经表面等离子共振法 获得了其与胰蛋白酶的结合动力学常数, 解离平衡常数KD = 1144 ×10 - 6 mol/L 。经Western blot 分析发现, 非洲 爪蟾的皮肤中也分布有血清白蛋白。推测两栖类动物血清白蛋白具有的胰蛋白酶抑制活性可能是其抵御天敌捕 食的一种防御措施。

Sox2基因3'非翻译区保守元件对基因表达的调控作用

转录因子Sox2是脊椎动物早期发育中最早表达的神经系统特异性基因之一,同时在干细胞的维持中也起着关键作用.通过生物信息学分析,作者发现在脊椎动物Sox2 mRNA 3'非翻译区中存在4段非常保守的富含AU的区域.将这些片段按照不同的组合克隆到GFP和荧光素酶两种报告基因载体中,在非洲爪蟾胚胎和培养细胞中检测了这些片段对报告基因表达的影响.结果显示,Sox2的3'UTR可影响报告基因的表达水平,特别是其中的保守片段2可显著提高报告基因的表达水平,表明Sox2 3'非翻译区有可能参与Sox2表达的转录后调控.

Physical Blocking Neural Tube Closure Affects Radial Intercalation and Neural Crest Midline-directed Migration in Xenopus Dorsal Explants

神经管闭合缺陷(NTDs)是一种严重的先天畸形疾病,在新生儿中有千分之一的发病率.神经管融合前后,多种组织参与形态发生运动.神经管一经融合,神经嵴细胞就会向背侧中线方向产生单极突出并向此方向迁移形成神经管的顶部.与此同时,神经管从腹侧开始发生辐射状切入以实现单层化.在此,我们在非洲爪蟾的移植体中机械阻断神经管的闭合以检测其细胞运动及随后的图式形成.结果显示神经管闭合缺陷的移植体不能形成单层化的神经管,并且神经嵴细胞滞留在侧面区域不能向背侧中线迁移,而对神经前体标记基因的检测显示神经管的背腹图式形成并未受到影响.以上结果表明神经管的融合对于辐射状切入和神经嵴细胞向背侧中线方向的迁移过程是必需的,而对于神经管的沿背腹轴方向的图式形成是非必需的.

利用修饰的随机引物构建非洲爪蟾酵母双杂交定向cDNA文库

描述了一种新的构建cDNA文库的方法,其中用来合成cDNA第一链的随机引物5'-端被加上碱基d(AC),在cDNA双链合成后所添加的连接头的末端含有碱基d(GTCG).在cDNA舣链3'-端,连接头连接上后会形成一个完整的Sall酶切位点d(GTCGAC),而在5'-端几乎不会形成Sall位点.在Sall酶切后利用形成的3'-粘性末端与5'-EcoRI粘性末端一起将cDNA双链定向导入线性化的质粒载体,再通过转化细菌获得cDNA文库.利用此方法构建了一个不同发育时期非洲爪蟾胚胎酵母双杂交cDNA文库.检测了文库中空载体的比例,插入片段大小和不同基因的表达水平几个指标,都符合预期,但是同时发现定位于mRNA的3'-端的插入片段比例比较低.这种倾向性符合文献报道,应该是实验系统的倾向性,不影响进一步的酵母双杂交实验.这些数据证明成功地构建了定向非洲爪蟾酵母双杂交cDNA文库.

中国有壳肉足虫(原生动物)五新纪录描述

描述了采自云南、湖北和广东的5种有壳肉足虫,隶属原生动物亚界,肉鞭门,叶足纲,表壳目,均为国内新纪录种:非游巧装表壳虫Arcella artocreaaplanata Grospietsch,1954;具角肋表壳虫A.costata angulosa(Perty)Playfair,1918;拟普通盘状表壳虫A.discoides pseudovulgaris Deflandre,1928;光滑弯凸表壳虫A.gibbosa laevis Deflandre,1928;球形叉口砂壳虫Difflugia gra