Phototrophic carbon fixation rates measured in water samples from the Porcupine Abyssal Plains during James Cook cruise JC087

Water samples were collected from pre-dawn CTD casts at 5 depths corresponding to 55%, 20%, 7%, 5% and 1% of surface irradiance. 1 litre water samples wrapped with optical filters to replicate light levels. Spiked with 200 µL of 13C labelled sodium bicarbonate. After 24 hourse filtered through ashed 25mm GF/F (Whatman) filters, rinsed with HCl solution (1-2%) and stored at -20oC. On shore encapsulated in tin capsules and analysed for 13C isotopic enrichment. Carbon uptake rates calculated using the equations of Fernandez et al. (2005).

Counts of harpacticoid copepods associated with cold-water coral substrates obtained from several Belgica cruises, Porcupine Seabight (North-East Atlantic)

The influence of microhabitat type on the diversity and community structure of the harpacticoid copepod fauna associated with a cold-water coral degradation zone was investigated in the Porcupine Seabight (North-East Atlantic). Three substrate types were distinguished: dead fragments of the cold-water coral Lophelia pertusa, skeletons of the glass sponge Aphrocallistes bocagei and the underlying sediment. At the family level, it appears that coral fragments and underlying sediment do not harbour distinctly diVerent assemblages, with Ectinosomatidae, Ameiridae, Pseudotachidiidae, Argestidae and Miraciidae as most abundant. Conclusions on assemblage structure and diversity of the sponge skeletons are limited as only two samples were available. Similarity analysis at species level showed a strong variation in the sediment samples, which did not harbour a distinctly different assemblage in opposition to the coral and sponge samples. Several factors (sediment infill on the hard substrates, mobility of the copepods, limited sample sizes) are proposed to explain this apparent lack of a distinct difference between the microhabitats. Coral fragments and sediment were both characterised by high species diversity and low species dominance, which might indicate that copepod diversity is not substantially influenced by hydrodynamic stress. The additive partitioning of species diversity showed that by adding locations species richness was greatly enhanced. The harpacticoid community in the cold-water coral degradation zone is highly diverse and includes 157 species, 62 genera and 19 families. Information from neighbouring soft-bottom regions is necessary to assess whether total species diversity is increased by the presence of these complex habitatproviding substrates.

Planktonic foraminiferal abundance and flux in the Porcupine Seabight, Northeast Atlantic

Modern planktonic foraminifera collected with a sediment trap and subfossil assemblages from surface sediments from Galway Mound in the Porcupine Seabight off southwestern Ireland, northeastern Atlantic, were studied to show recent assemblage variations. The sediment trap operated from April to August 2004 and covers the spring bloom and early summer conditions with sampling intervals of 8 days. Eleven different species were recorded. Glorotalia hirsuta, Turborotalita quinqueloba and Globigerinita glutinata appeared predominately in spring. Neogloboquadrina incompta, Globigerina bulloides and Globorotalia inflata were abundant in spring and summer. The highest foraminiferal tests flux occured in June. The faunal composition was similar to subfossil assemblages from surface sediments, but the species proportions were different. This was mainly affected by the subtropical G. hirsuta, which was frequent in 2004 and rare in surface sediment samples and in earlier plankton collections from the southern Porcupine Seabight that were performed during the 1990s. The weight of deposited foraminifera is mainly influenced by spring bloom as indicated by sea-surface chlorophyll-a data. The top three-ranked species, G. hirsuta, N. incompta and G. bulloides contributed 87 % to the foraminiferal carbonate flux at Galway Mound. Foraminiferal carbonate and shell flux as well as the shell size revealed variations, which are related to lunar periodicity. The data infer a lunar pacing of reproduction for the main species as well as for G. glutinata and G. inflata, which was not recorded before.

Seawater carbonate chemistry and auditory behavior of Orange clownfish (Amphiprion percula) during experiments, 2011

Ocean acidification is predicted to affect marine ecosystems in many ways, including modification of fish behaviour. Previous studies have identified effects of CO2-enriched conditions on the sensory behaviour of fishes, including the loss of natural responses to odours resulting in ecologically deleterious decisions. Many fishes also rely on hearing for orientation, habitat selection, predator avoidance and communication. We used an auditory choice chamber to study the influence of CO2-enriched conditions on directional responses of juvenile clownfish (Amphiprion percula) to daytime reef noise. Rearing and test conditions were based on Intergovernmental Panel on Climate Change predictions for the twenty-first century: current-day ambient, 600, 700 and 900 µatm pCO2. Juveniles from ambient CO2-conditions significantly avoided the reef noise, as expected, but this behaviour was absent in juveniles from CO2-enriched conditions. This study provides, to our knowledge, the first evidence that ocean acidification affects the auditory response of fishes, with potentially detrimental impacts on early survival.

Sedimentology on surface sediments of Porcupine Bay/Gollum Channel

Das Gollum Channel System mit dem untersuchten Kanal gc1 liegt in der Por- cupine Bucht südwestlich vor Irland. Während der ersten Messung im Jahr 2000 (ANT-XVII/4) fielen vier Kanalabschnitte mit markanten Rückstreuungen ins Au- ge. Diese Bereiche weisen eine abwechselnd starke und schwache Rückstreuinten- sität auf. Da der Schwerpunkt der Expedition ANT-XVII/4 auf der Erforschung der carbonate mounds lag, wurde eine genauere Untersuchung des Kanals während der Expedition ARK-XIX/3 (2003) nachgeholt. Mit dieser zweiten Messung wur- den die vier unterschiedlich rückstreuenden Sektoren bestätigt. Zusätzlich wurden Sedimentproben entnommen und Videos der Meeresbodenoberfläche aufgezeichnet. (ff siehe Diplomarbeit)

The effect of repeated exposure to parasite genotypes of the eyefluke Diplostomum pseudospathaceum on infection rate and immunization in three-spined sticklebacks

Adaptive immunity in vertebrates can confer increased resistance against invading pathogens upon re-infection. But how specific parasite genotypes affect the transition from innate to adaptive immunity is poorly understood. Here, we investigated the effects of homologous and heterologous exposures of genetically distinct parasite lineages of the eye fluke Diplostomum pseudospathaceum on gene expression patterns of adaptive immunity in sticklebacks (Gasterosteus aculeatus). We showed that observable differences were largely attributable to final exposures and that there is no transcription pattern characteristic for a general response to repeated infections with D. pseudospathaceum. Final exposure did not unify expression patterns of heterologous pre-exposed fish. Interestingly, heterologous final exposures showed similarities between different treatment groups subjected to homologous pre-exposure. The observed pattern was supported by parasite infection rates and suggests that host immunization was optimized towards an adaptive immune response that favored effectiveness against parasite diversity over specificity.