The alternatively spliced domain TnFnIII A1A2 of the extracellular matrix protein tenascin-C suppresses activation-induced T lymphocyte proliferation and cytokine production.

Several lines of evidences have suggested that T cell activation could be impaired in the tumor environment, a condition referred to as tumor-induced immunosuppression. We have previously shown that tenascin-C, an extracellular matrix protein highly expressed in the tumor stroma, inhibits T lymphocyte activation in vitro, raising the possibility that this molecule might contribute to tumor-induced immunosuppression in vivo. However, the region of the protein mediating this effect has remained elusive. Here we report the identification of the minimal region of tenascin-C that can inhibit T cell activation. Recombinant fragments corresponding to defined regions of the molecule were tested for their ability to inhibit in vitro activation of human peripheral blood T cells induced by anti-CD3 mAbs in combination with fibronectin or IL-2. A recombinant protein encompassing the alternatively spliced fibronectin type III domains of tenascin-C (TnFnIII A-D) vigorously inhibited both early and late lymphocyte activation events including activation-induced TCR/CD8 down-modulation, cytokine production, and DNA synthesis. In agreement with this, full length recombinant tenascin-C containing the alternatively spliced region suppressed T cell activation, whereas tenascin-C lacking this region did not. Using a series of smaller fragments and deletion mutants issued from this region, we have identified the TnFnIII A1A2 domain as the minimal region suppressing T cell activation. Single TnFnIII A1 or A2 domains were no longer inhibitory, while maximal inhibition required the presence of the TnFnIII A3 domain. Altogether, these data demonstrate that the TnFnIII A1A2 domain mediate the ability of tenascin-C to inhibit in vitro T cell activation and provide insights into the immunosuppressive activity of tenascin-C in vivo.

Worker morphology of the ant Gnamptogenys striatula Mayr (Formicidae, Ectatomminae) in different landscapes from the Atlantic Forest domain

Morphological traits, such as size and shape, may reflect a combination of ecological and evolutionary responses by organisms. Ants have been used to evaluate the relationship between the environment and species coexistence and morphology. In the present study, we analyzed the morphology of workers of Gnamptogenys striatula Mayr in different landscapes from the Atlantic Domain in southeastern Brazil, focusing on the variation in the morphological attributes of these populations compared to those from a dense ombrophilous forest. Eighteen morphological traits of functional importance for interactions between workers and the environment were measured to characterize the size and shape of the workers. In general, the results show that ants of urban areas possess some morphological attributes of smaller size, with highly overlapped morphological space between the populations in forested ecosystems. Further, some of the traits related to predation were relatively smaller in modified land areas than in the populations from preserved areas of dense ombrophilous forest. These results help broaden the knowledge regarding morphological diversity in G. striatula, suggesting that the characterization of the morphology may be important to quantify the effects of land use on morphological diversity, and presumably, to facilitate the use of ants as biological indicators.

O Sistema Semi-Presidencialista Cabo-verdiano: A Relação entre os Poderes Executivo e Legislativo

O artigo procura analisar a relação que se estabelece entre o poder executivo e legislativo no sistema de governo cabo-verdiano, onde Investigadores buscam compreendê-lo, tendo em conta a sua configuração prática, teórica e constitucional. Há que realçar a proeminência do debate e dos estudos realizados no sentido de compreender como é que a academia científica procura debelar esta problemática. Duas questões são pertinentes neste debate: a primeira refere-se à configuração teórico-constitucional do sistema de governo cabo-verdiano e a outra à prática política e legislativa.

The semi-presidential system of Cape Verde: the relationship between the executive and the legislative powers = O sistema semi-presidencialista caboverdiano: a relação entre os poderes executivo e legislativo

e article analyses the relationship established between the executive and legislative powers in the Cape Verdean government system where researchers seek to understand it, taking into account their theoretical and constitutional setting practice. It should be noted the prominence of the debate and studies undertaken to understand how the scienti c academy seeks to eradicate this problem. Two issues are relevant in this debate: the rst reporting to the theoretical and constitutional con guration of Cape Verdean government system and the other to its policy and legislative practice. Keywords: Cape Verde. Semi-presidential System. Systems of Government. Legislative and Executive Powers.

PIDD death-domain phosphorylation by ATM controls prodeath versus prosurvival PIDDosome signaling.

Biochemical evidence implicates the death-domain (DD) protein PIDD as a molecular switch capable of signaling cell survival or death in response to genotoxic stress. PIDD activity is determined by binding-partner selection at its DD: whereas recruitment of RIP1 triggers prosurvival NF-κB signaling, recruitment of RAIDD activates proapoptotic caspase-2 via PIDDosome formation. However, it remains unclear how interactor selection, and thus fate decision, is regulated at the PIDD platform. We show that the PIDDosome functions in the "Chk1-suppressed" apoptotic response to DNA damage, a conserved ATM/ATR-caspase-2 pathway antagonized by Chk1. In this pathway, ATM phosphorylates PIDD on Thr788 within the DD. This phosphorylation is necessary and sufficient for RAIDD binding and caspase-2 activation. Conversely, nonphosphorylatable PIDD fails to bind RAIDD or activate caspase-2, and engages prosurvival RIP1 instead. Thus, ATM phosphorylation of the PIDD DD enables a binary switch through which cells elect to survive or die upon DNA injury.

Calibration of time domain reflectometry (DTR) for soil moisture measurements in cultivated peat soils

Tiivistelmä: TDR-mittausten kalibrointi viljeltyjen turvemaiden kosteuden mittaamiseen

Fixação do N2 em leucena (Leucaena leucocephala) em solo da região semi-árida brasileira submetido à salinização

Com a finalidade de avaliar a tolerância de rhizobium loti em Leucaena leucocephala cv K8, submetida a níveis crescentes de salinidade, realizou-se um experimento em casa de vegetação, usando-se um Podzólico Vermelho-Amarelo textura franco-arenosa, coletado em Serra Talhada (PE). O experimento obedeceu ao arranjo fatorial 5 x 4, no delineamento em blocos ao acaso, com 3 repetições. Foram usados 5 níveis de salinidade do solo (C.E. = 1,5; 6,6; 10,1; 12,8 e 14,4 dS m-1) e 2 tratamentos inoculados (NFB 494 e SEMIA 6069), fertilização nitrogenada com 200 mg kg-1 de N (NH4NO3), e o controle sem inoculação e sem adubação nitrogenada. O incremento dos níveis crescentes de salinidade reduziu a nodulação (número e massa de nódulos), o rendimento de matéria seca e a acumulação de N na parte aérea. O tratamento com fertilização nitrogenada inibiu totalmente a nodulação em leucena, em todos os níveis de salinidade; contudo, promoveu melhores rendimentos na acumulação de N e na produção de matéria seca. Observou-se resposta significativa das plantas inoculadas com a estirpe SEMIA 6069, em todas as características avaliadas, superando os resultados obtidos com o isolado NFB 494.

Molecular basis of coagulation factor V deficiency caused by the R1698W inter-domain mutation.

Coagulation factor V (FV) deficiency is characterised by variable bleeding phenotypes and heterogeneous mutations. To add new insights into the FV genotype-phenotype relationship, we characterised the R1698W change in the A3 domain, at the poorly investigated interface with the A2 domain. The FV R1698W mutation was responsible for a markedly reduced expression level (10% of FV-WT) and specific activity in thrombin generation (0.39). Interestingly, the FVa1698W showed rapid activity decay upon activation due to increased dissociation rate between the heavy and light chains. The importance of the size and charge of the residue at position 1698 was investigated by three additional recombinant mutants, FVR1698A, FVR1698Q, and FVR1698E. FVR1698A and FVR1698Q expression (30 and 45% of FV-WT), specific activity (both 0.57) and stability were all reduced. Noticeably, FVR1698E showed normal activity and stability despite poor expression (10% of FV-WT). These data indicate the essential role of R1698 for normal biosynthetic process and support local flexibility for positively or negatively charged residues to produce stable and functional A3-A2 domain interactions. Their experimental alteration produces a gradient of FV defects, which help to interpret the wide spectrum of phenotypes in FV-deficient patients.

Influence of tree species on the herbaceous understory and soil chemical characteristics in a silvopastoral system in semi-arid northeastern Brazil

Studies from some semi-arid regions of the world have shown the beneficial effect of trees in silvopastoral systems, by promoting the formation of resource islands and increasing the sustainability of the system. No data are available in this respect for tree species of common occurrence in semi-arid Northeastern Brazil. In the present study, conducted in the summer of 1996, three tree species (Zyziphus joazeiro, Spondias tuberosa and Prosopis juliflora: ) found within Cenchrus ciliaris pastures were selected to evaluate differences on herbaceous understory and soil chemical characteristics between samples taken under the tree canopy and in open grass areas. Transects extending from the tree trunk to open grass areas were established, and soil (0-15 cm) and herbaceous understory (standing live biomass in 1 m² plots) samples were taken at 0, 25, 50, 100, 150 and 200% of the average canopy radius (average radius was 6.6 ± 0.5, 4.5 ± 0.5, and 5.3 ± 0.8 m for Z. joazeiro, P. juliflora, and S. tuberosa , respectively). Higher levels of soil C, N, P, Ca, Mg, K, and Na were found under the canopies of Z. joazeiro and P. juliflora: trees, as compared to open grass areas. Only soil Mg organic P were higher under the canopies of S. tuberosa trees, as compared to open grass areas. Herbaceous understory biomass was significantly lower under the canopy of S. tuberosa and P. juliflora trees (107 and 96 g m-2, respectively) relatively to open grass areas (145 and 194 g m-2). No herbaceous biomass differences were found between Z. joazeiro canopies and open grass areas (107 and 87 g m-2, respectively). Among the three tree species studied, Z. joazeiro was the one that presented the greatest potential for use in a silvopastoral system at the study site, since it had a larger nutrient stock in the soil without negatively affecting herbaceous understory biomass, relatively to open grass areas.

Estimativa da acidez potencial pelo pH SMP em solos do semi-árido do Nordeste brasileiro

Neste estudo avaliou-se a relação entre o teor de H + Al e o pH SMP, visando estabelecer uma equação para estimar a acidez potencial de solos do Semi-Árido do Nordeste Brasileiro. As análises dos teores de H + Al e dos valores de pH SMP foram realizadas em 81 amostras de solo, variando os teores de carbono de 1,8 a 35,6 g kg-1 e os de argila de 60 a 590 g kg-1. Os resultados demonstraram que a acidez potencial dessas amostras de solo, expressa em mmol c dm-3, pode ser estimada pelo valor do pH em solução tampão SMP, por meio da equação de regressão: H + Al = 31,521 (pH SMP)² - 451,61 pH SMP + 1625,3 (R² = 0,87**).

Diet and breeding success of long-eared owls in a semi-arid environment

Only a few studies, and mostly in temperate climates in Europe, have examined the breeding and diet of long-eared owls (Asia otus) compared to studies of cavity-breeding owls, possibly because of the difficulties in reaching the nests of the former. Here we studied a population of long-eared owls, monitoring the diet of breeding owls and that of owls at a communal roost, every two to three months during 2006 -2009, in a semi-arid region in Israel. It was found that the studied owls produced more young than in most countries in Europe. Diet was not associated with breeding parameters of the owls, whereas laying date was negatively correlated with both clutch size and number of nestlings. We found that more social voles (Microtus socialis) and fewer birds and house mice (Mus musculus) made up the diet at nests than that of adults at the roosts. The diet and breeding of long-eared owls in Israel differ from that in Europe, with birds and mice comprising an important part of the diet, in addition to voles.

A template-assembled synthetic protein surface mimetic of the von Willebrand factor A1 domain inhibits botrocetin-induced platelet aggregation.

Platelet adhesion, the initial step of platelet activation, is mediated by the interaction of von Willebrand factor (VWF) with its platelet receptor, the GPIb-IX complex. The binding of VWF to GPIb-IX is induced either by increased shear stress or by exogenous modulators, such as botrocetin. At a molecular level, this interaction takes place between the A1 domain of VWF and the GPIb alpha chain of the GPIb-IX complex. We report here the design and functional characteristics of a VWF template-assembled synthetic protein (TASP), a chimeric four-helix-bundle TASP scaffold mimicking the surface of the A1 domain. Twelve residues located on helices alpha 3 and alpha 4 in the native A1 domain were grafted onto a surface formed by two neighboring helices of the TASP. VWF TASP was found to inhibit specifically botrocetin-induced platelet aggregation and to bind both botrocetin and GPIb alpha. However, in contrast to the native A1 domain, VWF TASP did not bind simultaneously to both ligands. Modeling studies revealed that the relative orientation of the alpha helices in VWF TASP led to a clash of bound botrocetin and GPIb alpha. These results demonstrate that a chimeric four-helix-bundle TASP as a scaffold offers a suitable surface for presenting crucial residues of the VWF A1 domain; the potential of the TASP approach for de novo protein design and mimicry is thereby illustrated.

Tomografia computadorizada na avaliação da densidade de um solo do semi-árido brasileiro

A densidade do solo de amostras indeformadas foi determinada por meio das técnicas de tomografia computadorizada e do torrão impermeabilizado, visando à identificação de processos de compactação do solo e a comparação de métodos. A pesquisa também visou auxiliar um levantamento pedológico elaborado com fins de classificação de terras para irrigação. As amostras de solo foram coletadas da região semi-árida de Petrolina (PE), ao longo de perfis do solo, da superfície até 1 m de profundidade, em camadas de 0,1 m e em duas áreas distintas quanto à sua ocupação vegetal e manejo: (1) vegetação natural (caatinga); (2) área cultivada e irrigada por pivô central. As tomografias foram realizadas com um tomógrafo de primeira geração, constituído por uma fonte de radiação gama de 137Cs e um detetor cintilador de NaI(Tl), com eletrônica padrão de espectrometria gama e sistema de movimentação de amostra controlados por uma interface específica acoplada a um microcomputador. Na área de caatinga, os resultados evidenciam a ocorrência de um adensamento do solo em camadas mais profundas, abaixo de 0,4 m, bem como de uma camada adensada e, ou, compactada entre aproximadamente 0 e 0,4 m, na área cultivada com pivô central, possivelmente em virtude da ação de máquinas e implementos utilizados no preparo e cultivo do solo.

Caracterização micromorfológica e considerações sobre a gênese de solos de tabuleiro do semi-árido do Brasil

Detalhadas investigações macro e, especialmente, micromorfológicas foram realizadas em dois perfis de Argissolo Amarelo e um de Planossolo de uma superfície geomorfológica tabular, pertencente aos Tabuleiros Sertanejos (Interioranos) na bacia hidrográfica do médio São Francisco em Petrolina, Pernambuco. O objetivo do estudo foi caracterizar micromorfologicamente os solos, procurando fornecer subsídios para o entendimento da pedogênese, como uma forma de entender a diversidade dos solos na paisagem. Os resultados indicam que os três perfis foram derivados de sedimentos pós-cretáceos, em intensa mistura com resíduos de rochas cristalinas do Pré-Cambriano, provavelmente, ainda, influenciados por materiais de antigos terraços fluviais do rio São Francisco. As diferenciações entre os três perfis estão relacionadas com a heterogeneidade resultante da mistura desses materiais de origem, mas, principalmente, com o posicionamento dos solos no relevo, gerando condições diferenciadas de drenagem. Concreções de ferro herdadas do material de origem, sofreram degradações e se transfomaram em mosqueamentos plínticos, e, posteriormente, foram dissipadas no solo, eluviação/iluviação, ou perdas do sistema, parece ser um dos processos envolvidos na pedogênese.

A novel dominant mutation of the Nav1.4 alpha-subunit domain I leading to sodium channel myotonia.

BACKGROUND: Mutations in SCN4A may lead to myotonia. METHODS: Presentation of a large family with myotonia, including molecular studies and patch clamp experiments using human embryonic kidney 293 cells expressing wild-type and mutated channels. RESULTS: In a large family with historic data on seven generations and a clear phenotype, including myotonia at movement onset, with worsening by cold temperature, pregnancy, mental stress, and especially after rest after intense physical activity, but without weakness, the phenotype was linked with the muscle sodium channel gene (SCN4A) locus, in which a novel p.I141V mutation was found. This modification is located within the first transmembrane segment of domain I of the Na(v)1.4 alpha subunit, a region where no mutation has been reported so far. Patch clamp experiments revealed a mutation-induced hyperpolarizing shift (-12.9 mV) of the voltage dependence of activation, leading to a significant increase (approximately twofold) of the window current amplitude. In addition, the mutation shifted the voltage dependence of slow inactivation by -8.7 mV and accelerated the entry to this state. CONCLUSIONS: We propose that the gain-of-function alteration in activation leads to the observed myotonic phenotype, whereas the enhanced slow inactivation may prevent depolarization-induced paralysis.