The structure specificity of alpha-chymotrypsin. I. Polypeptides as substrates. II. N-acylated peptide esters as substrates. III. Some reactive esters of N-acylated amino acids as substrates

The structural specificity of α-chymotrypsin for polypeptides and denatured proteins has been examined. The primary specificity of the enzyme for these natural substrates is shown to closely correspond to that observed for model substrates. A pattern of secondary specificity is proposed.

A series of N-acetylated peptide esters of varying length have been evaluated as substrates of α-chymotrypsin. The results are interpreted in terms of proposed specificity theories.

The α-chymotrypsin-catalyzed hydrolyses of a number of N-acetylated dipeptide methyl esters were studied. The results are interpreted in terms of the available specificity theories and are compared with results obtained in the study of polypeptide substrates. The importance of non-productive binding in determining the kinetic parameters of these substrates is discussed. A partial model of the locus of the active site which interacts with the R’₁CONH- group of a substrate of the form R’₁CONHCHR₂COR’₃ is proposed.

Finally, some reactive esters of N-acetylated amino acids have been evaluated as substrates of α-chymotrypsin. Their reactivity and stereo-chemical behavior are discussed in terms of the specificity theories available. The importance of a binding interaction between the carboxyl function of the substrate and the enzyme is suggested by the results obtained.

Uso de plasma rico em plaquetas em queimaduras Modelo experimental em ratos

As queimaduras são eventos comuns e recorrentes no dia a dia dos atendimentos médicos. Há uma constante busca para entender a sua fisiopatologia, no intuito de minimizar seus resultados devastadores. Plasma rico em plaquetas (PRP) é um concentrado de plaquetas com capacidade de liberação local de múltiplos fatores de crescimento (FC) que aceleram a cicatrização. Este estudo consiste em dois experimentos: o primeiro visa validar um modelo experimental para a criação de queimaduras de tamanho e profundidade padronizados e, o segundo, avalia o uso de PRP em queimaduras. Para o desenvolvimento de queimaduras na validação do modelo experimental, foi idealizado um equipamento que permitisse o controle preciso da temperatura, além da utilização em conjunto de uma técnica inovadora de fixação que garante pressão constante no momento das queimaduras. Para o primeiro experimento, foram utilizados 12 ratos, por grupo, submetidos a queimaduras de 60 oC, 70 oC ou 80 oC por dez segundos, com um equipamento que desenvolvemos. Metade dos animais de cada grupo foi morta no terceiro dia e suas feridas foram analisadas por histologia, e, na outra metade, a ferida foi mensurada e acompanhada até o seu fechamento. No uso de PRP em queimaduras, foram avaliadas queimaduras de segundo grau (SG), segundo grau com diabetes mellitus induzido (SGD) e queimaduras de terceiro grau (TG). Noventa animais foram distribuídos em três grupos (SG, SGD e TG), onde, em cada um, dez animais foram tratados, dez serviram de controle e dez foram utilizados para o preparo do PRP. As áreas das feridas foram acompanhadas até o vigésimo primeiro dia, quando os animais foram mortos e biópsias de pele foram realizadas. Os resultados da validação do modelo mostram que as queimaduras produzidas com 60 oC foram de SG superficial (28% da derme envolvida); com 70 oC foram de SG profundo (72% da derme envolvida); e com 80 oC foram de TG (100% da derme envolvida). Em relação ao uso de PRP em queimaduras, observou-se que nos grupos tratados SG e SGD houve aceleração do fechamento da ferida e redução no número de células CD31, CD163, CD68, MPO e TGF-β positivas, e aumento do número de células MMP2 positivas. A neoepiderme foi mais fina nos controles dos grupos SG e SGD, e o tecido de granulação foi reduzido nos controles SGD e TG. O modelo utilizado é seguro e confiável para produzir queimaduras regulares e uniformes, de diâmetros variados, pela capacidade do controle fino da temperatura e pelo posicionamento do animal, e reprodutíveis. PRP parece acelerar a cicatrização de queimaduras de SG e SGD, mas não de TG.

Estimates of total seabird bycatch by Atlantic pelagic longline fisheries from 2003 to 2006

Results of recent seabird bycatch studies in the International Commission for the Conservation of Atlantic Tunas Convention Area were combined to estimate total seabird bycatch of pelagic longline fishing in the Atlantic Ocean, and bycatch per selected species. Available studies do not apply to the full spatial and temporal extent of the fishing effort, so assumptions were made to account for missing information. Over the 4 years from 2003 to 2006 the total seabird bycatch estimate was 48,500. Results indicate that about 57% of the pelagic longline seabird bycatch was albatrosses (Diomedea, Phoebastria, Thalassarche, Phoebetria spp.). This mortality is at a level to cause concern for the smaller and more vulnerable albatross populations in the region. Variation in annual seabird bycatch was caused by variation in total fishing effort, and movement of effort away from areas of higher seabird bycatch rates.

High-resolution computation of isotopic processes in northern California using a local climate model

EXTRACT (SEE PDF FOR FULL ABSTRACT): We describe a coupled local climate/isotope model that can calculate Rayleigh-type processes of distillation and fractionation of hydrogen isotopes along individual air mass flowlines in the western United States.This climate model is an extension of that detailed earlier by Craig and Stamm (1990). ... Volumetric effects of evapotranspiration (ET) are included. The model allows sensitivity studies of the influence of ET recycling.

Microvortex generators applied to flowfield containing a normal shock wave and diffuser

The flow through a terminating shock wave and the subsequent subsonic diffuser typically found in supersonic inlets has been simulated using a small-scale wind tunnel. Experiments have been conducted at an inflow Mach number of 1.4 using a dual-channel working section to produce a steady near-normal shock wave. The setup was designed so that the location of the shock wave could be varied relative to the diffuser. As the near-normal shock wave was moved downstream and into the diffuser, an increasingly distorted, three-dimensional, and separated flow was observed. Compared with the interaction of a normal shock wave in a constant area duct, the addition of the diffuser resulted in more prominent corner interactions. Microvortex generators were added to determine their potential for removing flow separation. Although these devices were found to reduce the extent of separation, they significantly increased three-dimensionality and even led to a large degree of flow asymmetry in some configurations. Copyright © 2011 by Neil Titchener and Holger Babinsky.

Effect of laser heating temperature on coating characteristics of Stellite 6 deposited by cold spray

Laser-assisted cold spray (LCS) is a new coating and fabrication process which combines some advantages of CS: solid-state deposition, retain their initial composition and high build rate with the ability to deposit materials which are either difficult or impossible to deposit using cold spray alone. Stellite 6 powder is deposited on medium carbon steels by LCS using N 2 as carrier gas pressure. The topography, cross section thickness, structure of the coatings is examined by SEM, optical microscopy, EDX. The results show that thickness and fluctuation of coating are improved with increased deposition site temperature. Porosity of coating is affected by N 2 and deposition site temperature. In this paper, it presents optimal coating using N 2 at a pressure of 3 MPa and temperature of 450°C and deposition site temperature of 1100°C.

Synthesis of 10 nm Ag nanoparticle polymer composite pastes for low temperature production of high conductivity films

The conversion of silver nanoparticle (NP) paste films into highly conductive films at low sintering temperature is an important requirement for the developing areas of additive fabrication and printed electronics. Ag NPs with a diameter of ∼10 nm were prepared via an improved chemical process to produce viscous paste with a high wt%. The paste consisted of as-prepared Ag NP and an organic vehicle of ethylcellulose that was deposited on glass and Si substrates using a contact lithographic technique. The morphology and conductivity of the imprinted paste film were measured as a function of sintering temperature, sintering time and the percentage ratio of Ag NP and ethylcellulose. The morphology and conductivity were examined using scanning electron microscopy (SEM) and a two-point probe electrical conductivity measurement. The results show that the imprinted films were efficiently converted into conducting states when exposed to sintering temperature in the range of 200-240 °C, this temperature is lower than the previously reported values for Ag paste. © 2010 Elsevier B.V. All rights reserved.

Shock wave/boundary-layer interaction control using a combination of vortex generators and bleed

To investigate whether vortex generators can be an effective form of passive flow control an experimental investigation has been conducted in a small-scale wind tunnel. With specific emphasis on supersonic inlet applications flow separation was initiated using a combined terminal shock wave and subsonic diffuser: a configuration that has been developed as a part of a program to produce a more inlet-relevant flowfield in a small-scale wind tunnel than previous studies. When flow control was initially introduced little overall flow improvement was obtained as the losses tended to be redistributed instead of removed. It became apparent that there existed a strong coupling between the center-span flow and the corner flows. As a consequence, only when flow control was applied to both the corner flows and center-span flow was a significant flow improvement obtained. When corner suction and center-span vortex generators were employed in tandem separation was much reduced and wall-pressure and stagnation pressure were notably improved. As a result, when applied appropriately, it is thought that vortex generators do have the potential to reduce the dependence on boundary-layer bleed for the purpose of separation suppression. Copyright © 2012 by Neil Titchener and Holger Babinsky. Published by the American Institute of Aeronautics and Astronautics, Inc.

The effects of various vortex generator configurations on a normal shock wave/boundary layer interaction

A number of VG configurations have been examined in a inlet relevant fiow-fleld which includes a terminal shock wave and subsequent subsonic diffuser. The flow-fleld was found to be highly sensitive to VG configuration. While the performance of one vane VG configuration was good over a wide range of streamwise positions, another quite similar vane configuration tended to perforin less well-especially when positioned further from the separation-and work is ongoing to determine the reasons behind tliis behavior. In addition, it was found that vane-type VG configurations were appreciably better at reducing separation than their micro-ramp counterparts. When combined with bleed in the centre-span region upstream of the VGs, the performance of vane type VGs was further enhanced and was the best of any configuration. © 2013 by Neil Titchener, Holger Babinsky and Eric Loth.

Sediment sources and the flood record from Wanghu lake, in the middle reaches of the Yangtze River

A sediment core was collected from the centre of Wanghu Lake, in the Middle Reaches of the Yangtze River. The recent part of the core was dated using a combination of Pb-210 and spheroidal carbonaceous particle (SCP) techniques. Extrapolating this chronology dated the laminated section of the core, between 723 and 881 mm, to the first half of the 18th century and this section was selected for detailed study. The thicknesses of the laminae were measured using reflecting and polarizing microscopes whilst geochemistry was determined by an electron probe. The thickness of the dark layers was found to be positively correlated with titanium concentrations, and negatively correlated with aluminium and potassium concentrations. The thickness of the light layers was found to be negatively correlated with the concentrations of titanium. It is concluded that the dark layers were deposited from the Fushui River, a tributary of the Yangtze River, under periods of normal flow whilst the light Layers were mainly deposited from the Yangtze River itself during flood periods. Documentary evidence for floods occurring in the take catchment corresponded with thick laminations of high titanium concentration. Further, two of the three thickest, light laminations with low titanium concentrations were found to be synchronous with recorded flood dates of the main Yangtze River in its Middle Reaches, but one was synchronous with a local drought. These data suggest that the Lake sediment provides an archive of the relative water levels of the Yangtze and Wanghu including floods of both the main Yangtze River and the local hydrological regime. (c) 2006 Elsevier B.V. All rights reserved.

Ocean urea fertilization for carbon credits poses high ecological risks

The proposed plan for enrichment of the Sulu Sea, Philippines, a region of rich marine biodiversity, with thousands of tonnes of urea in order to stimulate algal blooms and sequester carbon is flawed for multiple reasons. Urea is preferentially used as a nitrogen source by some cyanobacteria and dinoflagellates, many of which are neutrally or positively buoyant. Biological pumps to the deep sea are classically leaky, and the inefficient burial of new biomass makes the estimation of a net loss of carbon from the atmosphere questionable at best. The potential for growth of toxic dinoflagellates is also high, as many grow well on urea and some even increase their toxicity when grown on urea. Many toxic dinoflagellates form cysts which can settle to the sediment and germinate in subsequent years, forming new blooms even without further fertilization. If large-scale blooms do occur, it is likely that they will contribute to hypoxia in the bottom waters upon decomposition. Lastly, urea production requires fossil fuel usage, further limiting the potential for net carbon sequestration. The environmental and economic impacts are potentially great and need to be rigorously assessed. (C) 2008 Elsevier Ltd. All rights reserved.

Dissection of rye B chromosomes, and nondisjunction properties of the dissected segments in a common wheat background

The rye B chromosome is a supernumerary chromosome that increases in number in its host by directed postmeiotic drive. Two types of rye B chromosomes that had been introduced into common wheat were dissected into separate segments by the gametocidal system to produce a number of rearranged B chromosomes, such as telosomes, terminal deletions and translocations with wheat chromosomes. A total of 13 dissected B chromosomes were isolated in common wheat, and were investigated for their nondisjunction. properties. Rearranged B chromosomes, separated from their B-specific repetitive sequences on the distal part of the long arm, did not undergo nondisjunction, and neither did a translocated wheat chromosome carrying a long-arm distal segment containing the B-specific repetitive sequences. However, such rearranged B chromosomes, missing their B-specific sequences could undergo nondisjunction when they coexisted with the standard B chromosome or a wheat chromosome carrying the B-specific sequences. Deficiencies of the short arm did not completely abolish the nondisjunction properties of the B chromosome, but did reduce the frequency of nondisjunction. These results confirmed previous suggestions that the directed nondisjunction of the rye B chromosome is controlled by two elements, pericentromeric sticking sites and a trans-acting element carried at the distal region of the long arm of the B chromosome. Additionally, it is now shown that the distal region of the long arm of the B chromosome which provides this function is that which carries the B-specific repetitive sequences.

贵州凉风洞石笋的古气侯记录与古生态环境意义

自20世纪60年代以来，探索全球性气候变化规律和环境变迁史的研究工作在世界各国广泛开展。大规模的深海岩芯的研究、中国北方黄土的系统研究、大型湖泊沉积岩芯的研究及对树木年轮、泥炭、珊瑚、冰芯等“自然环境历史档案”开展的研究工作，都为重建古气候和古生态环境提供了大量的资料。洞穴化学沉积物（石笋）由于其特有的微层结构及其内的稳定氧、碳同位素和微量元素所蕴含的古气候与古生态环境信息，并且具有分布广、时间长、信息保存完整等特点，因此，它是研究地球环境变化很好的自然环境历史档案。本论文通过对凉风洞洞穴体系的综合研究和对凉风洞石笋（微层）生长特征及石笋的碳、氧稳定同位素组成的研究，系统探讨了贵州凉风洞石笋的古气候记录和古生态环境意义，得出以下主要结论：1，地表植被的类型及生物量等信息可综合反映于洞穴体系的不同组．分（气样、土样、水样）中。而洞穴的水动力条件也能很好的被洞穴滴水中所含微量（常量）元素记录。根据分析，洞穴综合体系对外界气候与生态环境的响应关系存在一定规律性。通过对比说明，我们所选的凉风洞基岩的溶蚀和缓冲对水体中的信息影响不大，即洞穴滴水较好的继承了土壤水所携带的地表气候与生态环境信息，是理想的研究对象。2．凉风洞石笋具有多个沉积旋回，不同沉积旋回的纹层组合及纹层结构存在一定的差异，指示不同的沉积环境。根据年龄数据判断，旋回①至旋回⑧之间年龄跨度为1570-8000 aBP，以呈缓平顶（柱）对称叠复状的沉积形态组合为主，示洞顶滴水量较大，滴水点相对稳定，且均匀，与全新世较为稳定的气候与环境变化的主旋律相一致。旋回⑧以下至底部石葡萄状沉积物之上部分之间年龄跨度为8000-14220 aBP，期间经历末次冰期晚期向全新世大暖期过渡，受诸如新仙女木事件（Younger Dryas）等的影响，气候变化幅度大，且经历多次反复，石笋生长的沉积学特征表现为斜锥（柱）、尖顶锥不对称叠复纹层组合，示洞顶滴水水量较小但变化较大，且洞穴滴水不稳（固）定。与此时间段内不稳定的气候与环境变化的主旋律也相一致。3．凉风洞石笋上段微层具有典型南方石笋微层发育的特性：微层发育较差，层面多弯曲，层间界面模糊等。下段因为沉积间断较多、风化层面厚及受到若干时段内碳酸钙重结晶而导致晶体穿插层位生长的影响，尽管在某些层位有微层发育，但无法对石笋微层作连续观察记录。根据高精度的石笋TIMS、ICP-MS测年数据和在显微镜下所数石笋微层数量的对比，扣除若干个沉积间断及风化层导致的微层缺失，以及显微镜下肉眼对细小微层计数的误差，我们认为，凉风洞石笋微层是年生长层的可能性较大。4，由于部分测年数据仍在测试中，目前无法精确控制石笋中沉积间断的存在导致的信息缺失，因此，我们仅仅根据部分石笋测年数据，建立了凉风洞石笋在不同时段的生长速率。全新世以来石笋的生长速率在22μm／yr-51μm／yr之间，明显高于末次冰期晚期向全新世过渡这一时间段内的石笋生长速率（16μm／yr）。这些数据间接印证了石笋生长响应于外界气候，尤其是降雨的变化。5．通过对洞穴体系的综合分析对比，我们判断凉风洞洞穴综合体系相对完整，洞穴化学沉积物的6先值较为直接的响应了土壤c压的61t值变化，即反映了地表的植被（c3植物和c；植物）的组成状况。贵州地区降雨80％集中在5-10月份，在此期间，基本受西南季风和东亚季风所控制。西南季风盛行时贵州各地的降雨频繁，是一年中雨量最集中的时期，在东亚季风影响时期，贵州多晴少雨，往往形成干早的天气。又西南季风控制区大气降雨创的值的加权平均值明显低于东亚季风控制区大气降雨δ18O值的加权平均值。因此，贵州地区年均降雨量和年均降雨δ18O值主要取决于西南（印度洋）季风的强弱：西南季风加强，降雨量增加，年均降雨剐、值偏负；西南季风减弱，降雨量减少，年均降雨δ18O值偏正。洞穴滴水的6旧O值变化基本继承了大气降水的别勿值变化。因此，对地处我国西南地区贵州南部的凉风洞，源于洞穴滴水的凉风洞石笋的别勺值变化直接响应了外界的大气降雨量的变化和西南季风与东亚季风相互的强弱交替。6．对凉风洞石笋碳、氧同位素组成的时间序列曲线作20点移动平均，发现，特别是进入全新世后，石笋的引3c值和扩、值几乎具有完全一致的同步变化，只是在变化幅度上在某些时段存在差异。说明在凉风洞石笋反映的14220-1570 aBP时间段内，尤其是10500-1570 aBP期间，本区域气候具有雨热（或干冷）同期的气候特征：在气温较高时间段，西南季风增强，气候湿润多雨，更有利于地表。植物的生长。气温降低时，随着东亚季风增强，西南季风减弱，气候干旱少雨，地表C；植物的生长占有一定的比例。据此重建和恢复了本地区14220-1570 aBP期间的古气候和古生态环境：（1）．14220-10500aBP，处于末次冰期晚期，气温较低。凉风洞石笋此时段的司、值都大于-9.8‰，最小值为-9.31‰，最大值达-7.290‰，平均值为-8.552‰。说明凉风洞洞穴地表的生长植被。植物占有一定的组分，石笋的δ18C值受C3植物和C4植物的共同影响。此时段内石笋6、值也存在一定的波动（-5.651‰－6.942‰），考虑到末次冰期晚期先全新世过渡期间气温变幅较大，O'Neil等（1969）所建立的氧同位素平衡分馏方程中的温度变化已不能忽略，并且大气降雨的温度效应作用也比较明显，因此我们对此时段的季风和大气降雨量的变化不作讨论。（2）. 10500-9300 aBP，新仙女木事件结束，进入全新世，气温逐渐回升。凉风洞石笋此时段的扩3c值大都小于-9.8‰，最小值为-10.377‰，最大值为-9.267‰，平均值为-9.910‰。凉风洞洞穴地表植被已逐渐由C3植物占主导。此时段石笋δ18C值明显卜降，最小值为-7.420‰，最大值为-6.077‰，平均值为-6.854‰。反映在全新世早期夏季风盛行，降雨量较大，西南季风对本地区全年降雨贡献率大。（3）．9300-8300 aBP，经历一段明显温度波动变化。仟3c值在-9.8‰上下波动，最小值为-10.155‰，最大值为-9.096‰，平均值为-9.712‰。凉风洞洞穴地表植被C4植物所占比例存在反复。此时段石笋岁a0值变化幅度不是很大，最小值为-6.796‰，最大值为-6.260‰，平均值为-6.490‰。受冬季风影响，夏季风有一定的减弱，总体降雨量一般，东亚季风对本地区全年降雨贡献率比全新世初期有所增大。（4）．8300-3l000BP，俗称全新世大暖期，此时段全球气温明显回升，石笋δ18C值总体逐渐降低，最小值为-n．926编，平均值为-10.496‰。凉风洞洞穴地表植被基本由C3植物所控制。但在扩飞值总体逐渐降低的趋势一F，也存在若干扩3c值明显增大时段，如7700-6700 aBP时段，61七值最大值达-8.110‰，地表C4植物所占比例已不能忽略。此时段石笋6150值变化幅度较大，最小值为-7.373‰，最大值为-5.047‰，平均值为-6.261‰。反映在全新世大暖期的大背景下西南季风和东亚季风的交替以及大气降雨量的变化存在较大的波动，说明了季风气候的不稳定性。（5）．3100-1570 aBP，在3100aBP前后，凉风洞石笋的δ18C值和δ18O值均急剧上升，标志进入晚全新世。此时段气温变幅很大，δ18C值总体虽然仍偏低，平均值为-10.275‰，但刻畜介于-6.495-12.097‰之间；δ18C值平均值为-6.184‰，变幅介于-4.677-8.65‰之间，均超过以往任何时段。此时段凉风洞洞穴地表植被基本上仍然由C。植物所控制，始于3100 aBP的急速降温事件使得在全新世晚期开始时段C4植物所占比例有一定的上升。此时段内西南季风和东亚季风反复多次交替，大气降雨量存在较大幅度的变化，说明了季风气候在此时段的很不稳定性。对于169于巧70 oBP百年时间段内石笋的δ18C值和司、值巨大幅度的急剧升高，有待进一步研究，也不排除石笋表层长期裸露受外界污染所致。

Residual Vibration Reduction in Computer Controlled Machines

Control of machines that exhibit flexibility becomes important when designers attempt to push the state of the art with faster, lighter machines. Three steps are necessary for the control of a flexible planet. First, a good model of the plant must exist. Second, a good controller must be designed. Third, inputs to the controller must be constructed using knowledge of the system dynamic response. There is a great deal of literature pertaining to modeling and control but little dealing with the shaping of system inputs. Chapter 2 examines two input shaping techniques based on frequency domain analysis. The first involves the use of the first deriviate of a gaussian exponential as a driving function template. The second, acasual filtering, involves removal of energy from the driving functions at the resonant frequencies of the system. Chapter 3 presents a linear programming technique for generating vibration-reducing driving functions for systems. Chapter 4 extends the results of the previous chapter by developing a direct solution to the new class of driving functions. A detailed analysis of the new technique is presented from five different perspectives and several extensions are presented. Chapter 5 verifies the theories of the previous two chapters with hardware experiments. Because the new technique resembles common signal filtering, chapter 6 compares the new approach to eleven standard filters. The new technique will be shown to result in less residual vibrations, have better robustness to system parameter uncertainty, and require less computation than other currently used shaping techniques.