云南文山黄牛和迪庆黄牛遗传多样性的蛋白电泳研究

采用水平淀粉胶蛋白电泳技术分析了云南文山黄牛和迪庆黄牛的３３种血液蛋白及同工酶，共计３７个遗传座位，其中６个座位检测到多态性。文山黄牛的多态座位百分比Ｐ＝０．１３８９，平均杂合度Ｈ＝０．０６１０，迪庆黄牛Ｐ＝０．１６６７，Ｈ＝０．０６９１。通过Ｎｅｉ氏遗传距离计算，运用ＰＨＹＬＩＰ３．５Ｃ软件包中的“ＵＰＧＭＡ”，“ＣＯＮＴＭＬ”和“ＮＥＩＧＨＢＯＲ”法，结合前人报道的数据对１０个黄牛品种进行聚类分析。结果得出：文山黄牛可能主要起源于瘤牛（Ｂｏｓｉｎｄｉｃｕｓ），迪庆黄牛可能主要起源于普通黄牛（Ｂｏｓｔａｕｒｕｓ）。我们的结果提示，云南黄牛可能是由当地人驯化的野生牛群与外来的驯化牛群相结合并适应当地气候和环境逐渐形成的，因而在蛋白水平上具有较为丰富的多样性。

Cross-species chromosome painting in the Perissodactyla: delimitation of homologous regions in Burchell's zebra (Equus burchellii) and the white (Ceratotherium simum) and black rhinoceros (Diceros bicornis)

Conserved chromosomal segments in the black rhinoceros, Diceros bicornis (DB1, 2n = 84), and its African sister-species the white rhinoceros, Ceratotherim simum (CSI, 2n = 82), were detected using Burchell's zebra (Equus burchellii, EBU, 2n = 44) chromosome-specific painting probes supplemented by a subset of those developed for the horse (Equus caballus, ECA, 2n = 64). In total 41 and 42 conserved autosomal segments were identified in C simum and D. bicornis respectively. Only 21 rearrangements (20 fissions and I fusion) are necessary to convert the Burchell's zebra karyotype into that of the white rhinoceros. One fission distinguishes the D. bicornis and C simum karyotypes which, excluding hetero- chromatic differences, are identical in all respects at this level of resolution. Most Burchell's zebra chromosomes correspond to two rhinoceros chromosomes although in four instances (EBU 18, 19, 20 and 21) whole chromosome synteny has been retained among these species. In contrast, one rhinoceros chromosome (DBI1, CSI1) comprises two separate Burchell's zebra chromosomes (EBU11 and EBU17). In spite of the high diploid numbers of the two rhinoceros species their karyotypes are surprisingly conserved offering a glimpse of the putative ancestral perissodactyl condition and a broader understanding of genome organization in mammals. Copyright (C) 2003 S. Karger AG, Base

滇南小耳猪遗传多样性的血液蛋白电泳研究

文采用蛋白电泳技术研究滇南小耳猪血液蛋白多态性。共分析了滇南小耳猪32个遗传位 点，其中AKP、CAT、ES、PA、6PGD和TF等6个位点检测到多态性，多态位点百分比P=0．1875，平均 杂合度H=0．0712。结果表明滇南小耳猪的血液蛋白多态程度较高，反映在蛋白质水平上的遗传多样 性较为丰富。

Reciprocal chromosome painting among human, aardvark, and elephant (superorder Afrotheria) reveals the likely eutherian ancestral karyotype

The Afrotheria, a supraordinal grouping of mammals whose radiation is rooted in Africa, is strongly supported by DNA sequence data but not by their disparate anatomical features. We have used flow-sorted human, aardvark, and African elephant chromosome painting probes and applied reciprocal painting schemes to representatives of two of the Afrotherian orders, the Tubulidentata (aardvark) and Proboscidea (elephants), in an attempt to shed additional light on the evolutionary affinities of this enigmatic group of mammals. Although we have not yet found any unique cytogenetic signatures that support the monophyly of the Afrotheria, embedded within the aardvark genome we find the strongest evidence yet of a mammalian ancestral karyotype comprising 2n = 44. This karyotype includes nine chromosomes that show complete conserved synteny to those of man, six that show conservation as single chromosome arms or blocks in the human karyotype but that occur on two different chromosomes in the ancestor, and seven neighbor-joining combinations (i.e., the synteny is maintained in the majority of species of the orders studied so far, but which corresponds to two chromosomes in humans). The comparative chromosome maps presented between human and these Afrotherian species provide further insight into mammalian genome organization and comparative genomic data for the Afrotheria, one of the four major evolutionary clades postulated for the Eutheria.

龙陵黄山羊遗传多样性同功酶电泳研究

采用常规水平式淀粉胶蛋白电泳技术，对３８只龙陵黄山羊个体的３９个遗传座位的血液同功酶的多态性进行了研究。结果发现，ＡＫＰ、ＣＥＳ－Ｉ、ＥＳＤ、ＧＯＩ、ＬＡＰ、ＭＤＨ、ＭＥ和ＮＰ等８个座位具多态性，多态座位ＡＫＰＯ、ＣＥＳ－ＩＩ、ＦＳＤＡ、ＧＯＩＢ、ＬＡＰＡ、ＭＤＨＡ、ＭＥＡ和ＮＰＡ的基因频率较高；多态座位百分比Ｐ＝０２０５１，平均杂合度Ｈ＝００９０６±００２６５。结果表明，云南龙陵黄山羊与已检测的其它山羊比较，遗传多样性水平较高

云南中甸尼西鸡的血液蛋白多态性研究

　采用水平式淀粉胶凝胶电泳技术和垂直式聚丙烯酰胺凝胶电泳技术检测了云南中 甸尼西鸡的血液蛋白多态，对33个样本的37个基因座位进行了分析，共有9个座位出现多态，分 别为ES-1、ES-2、AKP-1、AKP-2、LAP、PGM、CK、Tf及6PGD。多态位点百分比P=0.2432,平 均杂合度=0.1015,每个座位等位基因的平均数A=1.3784,结果表明尼西鸡的血液蛋白多态程度较 高，在蛋白质水平上的遗传多样性较为丰富。同时发现Amy-1座位只出现杂合子AB型。

Evolution of genome organizations of squirrels (Sciuridae) revealed by cross-species chromosome painting

With complete sets of chromosome-specific painting probes derived from flow-sorted chromosomes of human and grey squirrel (Sciurus carolinensis), the whole genome homologies between human and representatives of tree squirrels (Sciurus carolinensis, Callosciurus erythraeus), flying squirrels (Petaurista albiventer) and chipmunks (Tamias sibiricus) have been defined by cross-species chromosome painting. The results show that, unlike the highly rearranged karyotypes of mouse and rat, the karyotypes of squirrels are highly conserved. Two methods have been used to reconstruct the genome phylogeny of squirrels with the laboratory rabbit (Oryctolagus cuniculus) as the out-group: ( 1) phylogenetic analysis by parsimony using chromosomal characters identified by comparative cytogenetic approaches; ( 2) mapping the genome rearrangements onto recently published sequence-based molecular trees. Our chromosome painting results, in combination with molecular data, show that flying squirrels are phylogenetically close to New World tree squirrels. Chromosome painting and G-banding comparisons place chipmunks ( Tamias sibiricus), with a derived karyotype, outside the clade comprising tree and flying squirrels. The superorder Glires (order Rodentia + order Lagomorpha) is firmly supported by two conserved syntenic associations between human chromosomes 1 and 10p homologues, and between 9 and 11 homologues.

Refined genome-wide comparative map of the domestic horse, donkey and human based on cross-species chromosome painting: insight into the occasional fertility of mules

We have made a complete set of painting probes for the domestic horse by degenerate oligonucleotide-primed PCR amplification of flow-sorted horse chromosomes. The horse probes, together with a full set of those available for human, were hybridized onto metaphase chromosomes of human, horse and mule. Based on the hybridization results, we have generated genome-wide comparative chromosome maps involving the domestic horse, donkey and human. These maps define the overall distribution and boundaries of evolutionarily conserved chromosomal segments in the three genomes. Our results shed further light on the karyotypic relationships among these species and, in particular, the chromosomal rearrangements that underlie hybrid sterility and the occasional fertility of mules.

云南普通马矮型马蛋白多态性及其品种分化关系

运用蛋白电泳技术, 对云南普通马和矮型马群体的遗传多样性及其群众间遗传分化关系作了分析研究。44个遗传座位中有10个座位检测到多态性, 通过多态百分比、平均杂合度、平均等位基因的计算表明, 云南普通马和矮型马的遗传多样性较为丰富, 小区域内的群体存在着多样的遗传基因, 两种马在遗传上有一定差异。根据分子钟假说和相应的公式, 推算两者的分岐时间约为18.5万年。图1表2参12(金显谟)

云南姬鼠的蛋白多态性及其遗传分化关系

采用蛋白电泳技术对云南的3种姬鼠的蛋白多态性进行了分析, 共检测遗传座位27个, 发现21个座位存在多态性。根据蛋白多态性的数据对研究对象进行了遗传分化关系的探讨, 并得到了一棵无根系统树。

Comparative map between the domestic pig and dog

Cross-species chromosome painting with probes derived from flow-sorted dog and human chromosomes was used to construct a high-resolution comparative map for the pig. In total 98 conserved autosomal segments between pig and dog were detected by probes specific for the 38 autosomes and X Chromosome of the dog. Further integration of our results with the published human-dog and cat-dog comparative maps, and with data from comparative gene mapping, increases the resolution of the current pig-human comparative map. It allows for the conserved syntenies detected in the pig, human, and cat to be aligned against the putative ancestral karyotype of eutherian mammals and for the history of karyotype evolution of the pig lineage to be reconstructed. Fifteen fusions, 17 fissions, and 23 inversions are required to convert the ancestral mammalian karyotype into the extant karyotype of the pig.

云南盐津乌鸡血液蛋白及同工酶遗传多态性研究

采用水平式淀粉凝胶电泳技术,对云南盐津乌鸡34只个体共计34个基因座位的血液蛋白及同工酶多态性进行研究,发现LAP、AKP-1、AKP-2、CKs-1、PEP-B 5个座位具有多态性,多态座位百分比和平均杂合度分别为P=0.1470,H=0.0586。对多态座位基因频率进行计算发现盐津乌鸡LAP~(B)、aKP-1、AKP-2、CEs-1~(A)、PEP-B~(A)频率较高。结果表明,云南盐津乌鸡遗传多样性程度较常见的外国鸡种高,且具有独特基因型,属选育程度低,选择潜力大的地方品种,具有较高的保种价值。

Chromosome painting in the long-tailed field mouse provides insights into the ancestral murid karyotype

We report on the hybridization of mouse chromosomal paints to Apodemus sylvaticus, the long-tailed field mouse. The mouse paints detected 38 conserved segments in the Apodemus karyotype. Together with the species reported here there are now six species of rodents mapped with Mus musculus painting probes. A parsimony analysis indicated that the syntenies of nine M. musculus chromosomes were most likely already formed in the muroid ancestor: 3, 4, 7, 9, 14, 18, 19, X and Y. The widespread occurrence of syntenic segment associations of mouse chromosomes 1/17, 2/13, 7/19, 10/17, 11/16, 12/17 and 13/15 suggests that these associations were ancestral syntenies for muroid rodents. The muroid ancestral karyotype probably had a diploid number of about 2n = 54. It would be desirable to have a richer phylogenetic array of species before any final conclusions are drawn about the Muridae ancestral karyotype. The ancestral karyotype presented here should be considered as a working hypothesis. Copyright (C) 2004 S. Karger AG, Basel.

中国黑冠长臂猿的遗传多样性及其分子系统学研究--非损伤取样DNA序列分析

采用非损伤性DNA基因分型技术(Noninvasive DNA genotyping),对我国珍稀灵长类动物黑冠长臂猿11个个体的线粒体DNA(mtDNA)控制区159bp的片段进行了序列分析。根据分子系统树,结合形态学方面的资料,提出对中国黑冠长臂猿新的分类观点,即现生的中国黑冠长臂猿应为3个种(H. concalor; H. leucogenys; H. hainanus),其中 H. concolor含3个亚种(H.c.concolor, H.c.jingdongensis, H.c.furvogaster)。同时,针对该类珍稀动物保护,提出将上述黑冠长臂猿的种和亚种作为不同的进化显著性单元(Evolutionarilly Sigificant Units, ESU)进行保护和遗传管理。