Acidez do solo e calagem em pomares de frutíferas tropicais

A produtividade agrícola nos trópicos é afetada, principalmente, pelos fatores ligados à acidez do solo (pH, saturação por bases, acidez potencial, disponibilidade de nutrientes). A calagem é uma prática bem conhecida para corrigir a acidez do solo em culturas anuais, ainda que não seja praticada com a regularidade necessária. Entretanto, em culturas perenes, a incorporação de corretivos é mais complexa, devido às características desse grupo de plantas e à carência de informações científicas sobre o assunto. Em condições de acidez, a calagem promove a neutralização do Al3+, a elevação do pH e o fornecimento de Ca e Mg, possibilitando a proliferação de raízes, com reflexos positivos no crescimento da parte aérea das plantas. Contudo, devido à baixa solubilidade e à lenta movimentação do calcário ao longo do perfil do solo, há obrigatoriedade de se fazer distribuição uniforme e incorporação profunda, antecedendo a implantação do pomar, a fim de garantir o eficiente aproveitamento de água e de nutrientes contidos nessas camadas. A calagem deve ser considerada um investimento, pois seus benefícios perduram além de um ano ou de uma safra agrícola. Isso se deve ao efeito residual dos corretivos de acidez do solo, sendo o tempo de duração desse efeito dependente de vários fatores, entre os quais: condições edafoclimáticas, cultura, manejo da área e tipo de corretivo empregado. Em geral, partículas maiores de calcário têm efeito residual mais prolongado, sendo empregadas na implantação dos pomares. No entanto, a relação entre o tamanho da partícula e o efeito residual tem sido pouco pesquisada, devido à necessidade de estudos de longa duração. Em função das elevadas doses de adubos nitrogenados utilizadas nos pomares de altos rendimentos, a acidez do solo aumenta, como resultado do processo de nitrificação. Em pomares já implantados, o procedimento atualmente utilizado pelos produtores é a incorporação superficial do calcário na área. As recomendações talvez fossem outras, caso houvesse maior subsídio da pesquisa, tendo em vista os diversos problemas fitossanitários que podem ocorrer, direta ou indiretamente da prática da incorporação do corretivo, tais como redução do sistema radicular, ferimento das raízes e consequente risco de infecções, com disseminação de pragas e doenças no pomar. O objetivo desta revisão é apresentar os principais resultados de pesquisas sobre o assunto, mostrando os efeitos da calagem sobre a fertilidade do solo, a nutrição e a produtividade de frutíferas de grande importância econômica para o Brasil, bem como discutir a duração do efeito residual dos corretivos e a dose mais ecônomica a ser aplicada nos pomares de frutas em implantação e em produção.

Mutations in LONP1, a mitochondrial matrix protease, cause CODAS syndrome.

Cerebral, ocular, dental, auricular, skeletal anomalies (CODAS) syndrome (MIM 600373) was first described and named by Shehib et al, in 1991 in a single patient. The anomalies referred to in the acronym are as follows: cerebral-developmental delay, ocular-cataracts, dental-aberrant cusp morphology and delayed eruption, auricular-malformations of the external ear, and skeletal-spondyloepiphyseal dysplasia. This distinctive constellation of anatomical findings should allow easy recognition but despite this only four apparently sporadic patients have been reported in the last 20 years indicating that the full phenotype is indeed very rare with perhaps milder or a typical presentations that are allelic but without sufficient phenotypic resemblance to permit clinical diagnosis. We performed exome sequencing in three patients (an isolated case and a brother and sister sib pair) with classical features of CODAS. Sanger sequencing was used to confirm results as well as for mutation discovery in a further four unrelated patients ascertained via their skeletal features. Compound heterozygous or homozygous mutations in LONP1 were found in all (8 separate mutations; 6 missense, 1 nonsense, 1 small in-frame deletion) thus establishing the genetic basis of CODAS and the pattern of inheritance (autosomal recessive). LONP1 encodes an enzyme of bacterial ancestry that participates in protein turnover within the mitochondrial matrix. The mutations cluster at the ATP-binding and proteolytic domains of the enzyme. Biallelic inheritance and clustering of mutations confirm dysfunction of LONP1 activity as the molecular basis of CODAS but the pathogenesis remains to be explored.

COMPASS identifies T-cell subsets correlated with clinical outcomes.

Advances in flow cytometry and other single-cell technologies have enabled high-dimensional, high-throughput measurements of individual cells as well as the interrogation of cell population heterogeneity. However, in many instances, computational tools to analyze the wealth of data generated by these technologies are lacking. Here, we present a computational framework for unbiased combinatorial polyfunctionality analysis of antigen-specific T-cell subsets (COMPASS). COMPASS uses a Bayesian hierarchical framework to model all observed cell subsets and select those most likely to have antigen-specific responses. Cell-subset responses are quantified by posterior probabilities, and human subject-level responses are quantified by two summary statistics that describe the quality of an individual's polyfunctional response and can be correlated directly with clinical outcome. Using three clinical data sets of cytokine production, we demonstrate how COMPASS improves characterization of antigen-specific T cells and reveals cellular 'correlates of protection/immunity' in the RV144 HIV vaccine efficacy trial that are missed by other methods. COMPASS is available as open-source software.

Antibiotic susceptibility and molecular epidemiology of Panton-Valentine leukocidin-positive meticillin-resistant Staphylococcus aureus: An international survey

The antibiotic susceptibility and molecular epidemiology of Panton-Valentine leukocidin (PVL)-positive meticillin-resistant Staphylococcus aureus (MRSA) isolates reported from 17 countries in the Americas, Europe and, Australia-Asia were analysed. Among a total of 3236 non-duplicate isolates, the lowest susceptibility was observed to erythromycin in all regions. Susceptibility to ciprofloxacin showed large variation (25%, 75% and 84% in the Americas, Europe and Australia-Asia, respectively). Two vancomycin-intermediate PVL-positive MRSA isolates were reported, one from Hong Kong and the other from The Netherlands. Resistance to trimethoprim/sulfamethoxazole and linezolid was <1%. Among 1798 MRSA isolates from 13 countries that were tested for the requested 10 non-β-lactam antibiotics, 49.4% were multisusceptible. However, multiresistant isolates (resistant to at least three classes of non-β-lactam antibiotics) were reported from all regions. Sequence type 30 (ST30) was reported worldwide, whereas ST80 and ST93 were exclusive to Europe and Australia, respectively. USA300 and related clones (ST8) are progressively replacing the ST80 clone in several European countries. Eight major clusters were discriminated by multilocus variable-number tandem repeat assay (MLVA), showing a certain geographic specificity. PVL-positive MRSA isolates frequently remain multisusceptible to non-β-lactam agents, but multiresistance is already prevalent in all regions. Surveillance of MRSA susceptibility patterns should be monitored to provide clinicians with the most current information regarding changes in resistance patterns.

Chronic nonbacterial osteomyelitis in children: a retrospective multicenter study.

BACKGROUND: To determine the clinical presentation, current treatment and outcome of children with nonbacterial inflammatory bone disease. METHODS: Retrospective multicenter study of patients entered into the Swiss Pediatric Rheumatology Working Group registry with a diagnosis of chronic nonbacterial osteomyelitis (CNO) and synovitis acne pustulosis hyperostosis osteitis (SAPHO) syndrome. The charts were reviewed for informations about disease presentation, treatment, course and outcome. RESULTS: Forty-one children (31 girls and 10 boys) from 6 pediatric hospitals in Switzerland diagnosed between 1995 and 2010 were included in the study. The diagnosis was multifocal CNO (n = 33), unifocal CNO (n = 4) and SAPHO syndrome (n = 4). Mean age at onset of CNO was 9.5 years (range 1.4-15.6) and mean follow-up time was 52 months (range 6-156 months). Most patients (n = 27) had a chronic persistent disease course (>6 months), 8 patients had a course with one or more relapses and 6 patients had only one episode of CNO. Forty nine percent had received at least one course of antibiotics. In 57% treatment with nonsteroidal anti-inflammatory drugs (NSAID) was sufficient to control the disease. Twelve out of 16 children with NSAID failure subsequently received corticosteroids, methotrexate, TNF α inhibitors, bisphosphonates or a combination of these drugs. CONCLUSIONS: In a multicenter cohort of 41 children 22% started with unifocal lesion with a significant diagnostic delay. A higher proportion presented with chronic persistent disease than with a recurrent form. An osteomyelitis in the pelvic region is significantly associated with other features of juvenile spondylarthritis.