FoodMicro Database

The food industry on the island of Ireland carries out extensive testing of their food products but results of these analyses are not normally released for public evaluation.

Spatial distribution of schistosomiasis foci on Itamaracá Island, Pernambuco, Brazil

Acute cases of schistosomiasis have been found on the coastal area of Pernambuco, Brazil, due to environmental disturbances and disorderly occupation of the urban areas. This study identifies and spatially marks the main foci of the snail host species, Biomphalaria glabrata on Itamaracá Island. The chaotic occupation of the beach resorts has favoured the emergence of transmission foci, thus exposing residents and tourists to the risk of infection. A database covering five years of epidemiological investigation on snails infected by Schistosoma mansoni in the island was produced with information from the geographic positioning of the foci, number of snails collected, number of snails tested positive, and their infection rate. The spatial position of the foci were recorded through the Global Positioning System (GPS), and the geographical coordinates were imported by AutoCad. The software packages ArcView and Spring were used for data processing and spatial analysis. AutoCad 2000 was used to plot the pairs of coordinates obtained from GPS. Between 1998 and 2002 5009 snails, of which 12.2% were positive for S. mansoni, were collected in Forte Beach. A total of 27 foci and areas of environmental risk were identified and spatially analyzed allowing the identification of the areas exposed to varying degrees of risk.

Localización de áreas prioritarias de actuación para la ubicación decortafuegos usando software libre GIS: gvSIG, SEXTANTE y PostGIS

El present projecte se centrarà en l'aplicació dels SIG a la prevenció dels incendis forestals a Catalunya. En concret en la localització de zones òptimes per a la instal lació de tallafocs, mitjançant la utilització dels programes lliures gvSIG i Sextant, a més de la base de dades (BDD) espacial PostgreeSQL / PostGIS.

The Eukaryotic Promoter Database EPD: the impact of in silico primer extension.

The Eukaryotic Promoter Database (EPD) is an annotated non-redundant collection of eukaryotic POL II promoters, experimentally defined by a transcription start site (TSS). There may be multiple promoter entries for a single gene. The underlying experimental evidence comes from journal articles and, starting from release 73, from 5' ESTs of full-length cDNA clones used for so-called in silico primer extension. Access to promoter sequences is provided by pointers to TSS positions in nucleotide sequence entries. The annotation part of an EPD entry includes a description of the type and source of the initiation site mapping data, links to other biological databases and bibliographic references. EPD is structured in a way that facilitates dynamic extraction of biologically meaningful promoter subsets for comparative sequence analysis. Web-based interfaces have been developed that enable the user to view EPD entries in different formats, to select and extract promoter sequences according to a variety of criteria and to navigate to related databases exploiting different cross-references. Tools for analysing sequence motifs around TSSs defined in EPD are provided by the signal search analysis server. EPD can be accessed at http://www.epd. isb-sib.ch.

Analysis of the National Childhood Obesity Database 2005-06

This report looks at the first year of data collection on childhood obesity and the difficulties of this project. This report summarises the data available and provides high level analysis of the prevalence of overweight and obesity among the children measured in 2005-06. The report was produced for the Department of Health by the South East Public Health Observatory on behalf of the Association of Public Health Observatories, and published in December 2006.

Introducció als Sistemes d´Informació Geogràfica i creació d´una base de dades dels elements d´una xarxa de distribució d´aigua potable.

Aquest treball és una introducció als sistemes d'informació geogràfica, que consisteix en una breu descripció dels aspectes fonamentals dels sistemes d'informació geogràfica i en la creació d'una base de dades dels elements d'una xarxa de distribució d'aigua potable.

Analysis of the national childhood obesity database 2005-06

A report for the Department of Health by the South East Public Health Observatory on behalf of the Association of Public Health Observatories. The report looks at the first year of data collection on childhood obesity and the difficulties of this project. This report summarises the data available and provides high level analysis of the prevalence of overweight and obesity among the children measured in 2005-06.

Soil fungal communities of grasslands are environmentally structured at a regional scale in the Alps.

Studying patterns of species distributions along elevation gradients is frequently used to identify the primary factors that determine the distribution, diversity and assembly of species. However, despite their crucial role in ecosystem functioning, our understanding of the distribution of below-ground fungi is still limited, calling for more comprehensive studies of fungal biogeography along environmental gradients at various scales (from regional to global). Here, we investigated the richness of taxa of soil fungi and their phylogenetic diversity across a wide range of grassland types along a 2800 m elevation gradient at a large number of sites (213), stratified across a region of the Western Swiss Alps (700 km(2)). We used 454 pyrosequencing to obtain fungal sequences that were clustered into operational taxonomic units (OTUs). The OTU diversity-area relationship revealed uneven distribution of fungal taxa across the study area (i.e. not all taxa are everywhere) and fine-scale spatial clustering. Fungal richness and phylogenetic diversity were found to be higher in lower temperatures and higher moisture conditions. Climatic and soil characteristics as well as plant community composition were related to OTU alpha, beta and phylogenetic diversity, with distinct fungal lineages suggesting distinct ecological tolerances. Soil fungi, thus, show lineage-specific biogeographic patterns, even at a regional scale, and follow environmental determinism, mediated by interactions with plants.

Càlcul volumètric de terres amb SIG en l'explotació de recursos del subsòl

Assolir un coneixementsuficient dels fonaments en que es basen les eines SIG, i el desenvolupament d¿unprojecte que ens permetrà el càlcul del volum dels diferents tipus de terres que formenel subsòl d¿un area determinada de terreny utilitzant el programari lliure GvSig iSextante.

SIG per a la gestió dels vèrtexs geodèsics de Catalunya amb Geomedia

L¿objectiu del projecte es estudiar el que és i el que no és un sistema d¿informació geogràfica,conèixer la tecnologia associada a aquests sistemes, així com el tipus i format de les dades que fan servir. Tanmateix, l¿estudi no és només teòric i, per conèixer els mecanismes de automatització que ofereix GeoMedia, s¿implementa una petita eina de gestió de vèrtexs geodèsics centrada al territori de Catalunya que fa servir Oracle, com a gestor de bases de dades.

Northern Ireland Substitute Prescribing Database Report 31 March 2014

This bulletin summarises information on individuals referred to the Northern Ireland Substitute Prescribing Scheme (SPS). It relates to those referred up to and including the 31 March 2014 and focuses on those patients in contact with Substitute Prescribing treatment services during 2013/14.

BCN­Routing : càlcul web de rutes amb pgRouting, OpenStreetMap i OpenLayers

En aquest projecte s'ha desenvolupat una interfície web per calcular rutes a la ciutat de Barcelona. Les rutes calculades són a peu, entre un punt d'origen qualsevol i un punt d'interès turístic de la ciutat com a destí. Per això s'han extret les dades dels carrers de Barcelona d'OpenStreetMap i s'han insertat a una base de dades postgreSQL/postGIS, juntament amb una capa vectorial de punts d'interès turístic que s'ha creat amb el SIG d'escriptori qGIS. El càlcul de les rutes amb les dades de la base de dades s'ha realitzat amb l'extensió pgRouting, i la interfície web per seleccionar els punts d'origen i destí, mostrar els mapes, i mostrar les rutes resultat, s'ha desenvolupat utilitzant la llibreria OpenLayers.

First evaluation of human sperm quality in various geographic regions of Switzerland

A decline in human sperm quality and quantity has been reported in numerous Western countries. This observation was also accompanied by an increase in urogenital malformations. The need for epidemiological studies dealing with unbiased populations in order to understand the causes of these observations is obvious. In Switzerland, the large majority of young men are asked to attend a military camp to be drafted into the army. A few weeks before this camp, conscripts were contacted and invited to participate in a large national study on semen quality. The participation was totally voluntary and anonymous. From September 2005 to June 2007, 770 volunteers filled out a questionnaire, underwent a clinical examination and provided sperm, blood and urine samples. Using self-rated health assessments, the observed cohort could be considered as healthy and no testicular cancer was found. Moreover, the testicular volumes, measured using Prader's orchidometry and ultrasonography, were comparable to those already published for young male populations. The median sperm concentration was 47 x 10(6)/ml, which is close to the concentration reported in Denmark, known to have the highest incidence of testicular cancer in Europe. Statistically significant differences were observed between regions with a lower sperm concentration for men residing in the Alps (43 x 10(6)/ml) and in the Zurich area (36 x 10(6)/ml) compared to men from West Plateau (54 x 10(6)/ml) and from the Jura (54 x 10(6)/ml). Such a regional discrepancy could be related to environmental factors, including endocrine disruptors. In order to confirm such regional differences more volunteers from the already studied regions should be studied and other parts of the country should be investigated. The rather low sperm concentration of Swiss young volunteers should be considered as a national health issue and investigated further.

Northern Ireland Substitute Prescribing Database Report 31 March 2013

This bulletin summarises information on individuals referred to the Northern Ireland Substitute Prescribing Scheme (SPS). It relates to those referred up to and including the 31 March 2013 and focuses on those patients in contact with Substitute Prescribing treatment services during 2012/13.