青稞B组醇溶蛋白基因与上游调控区的克隆及基因表达

高等植物种子胚乳贮藏蛋白是种子发芽时的主要氮源，也是人类和动物食用植物蛋白的主要来源。大麦种子胚乳贮藏蛋白主要是醇溶蛋白（hordeins），占大麦胚乳总蛋白的50–60%。根据大麦醇溶蛋白的大小和组成特点，大麦醇溶蛋白被划分为三种类型：富硫蛋白亚类(B，γ-hordeins)、贫硫蛋白亚类（C-hordeins)以及高分子量蛋白亚类(D-hordeins)。B组和C组醇溶蛋白是大麦胚乳的两类主要贮藏蛋白，它们分别占大麦总醇溶蛋白成分的70–80%和10–12%。遗传分析表明，大麦B、C、D和γ-组醇溶蛋白分别是由位于大麦第五染色体1H（5）上的Hor2、Hor1、Hor3和Hor5位点编码。Hor2位点编码大量分子量相同但组成不同的B组醇溶蛋白（B-hordein）。B-hordein的种类、数量和分布是影响大麦酿造、食用及饲养品质的重要因素之一。为深入了解B-hordein基因家族的结构和染色体组织，探明Hor2位点基因表达的发育调控机制，最终达到改良禾谷类作物籽粒品质的目的，本研究以青藏高原青稞为材料，采用同源克隆法，分别克隆B-hordein基因和启动子，通过原核生物表达验证B-hordein基因功能，并利用实时定量PCR探索B-hordein基因表达时空关系，取得如下研究结果： 1. 以具有特殊B组醇溶蛋白亚基组成的9份青藏高原青稞为材料，根据GenBank中三个B-hordein基因序列（GenBank No. X03103, X53690和X53691）设计一对引物，通过PCR扩增，获得23个B-hordein基因克隆并对其进行了序列分析。核苷酸序列分析表明，所有克隆均包含完整的开放阅读框。有11个克隆都存在一个框内终止密码子，推测这11个克隆可能是假基因。推测的氨基酸序列分析表明，所有大麦B-hordein具有相似的蛋白质基本结构，均包括一个高度保守的信号肽、中间重复区以及C-端结构域。不同大麦种重复区内重复基元的数目有较大差异。青稞材料Z07–2和Z26的B-hordeins仅具有12个重复基元结构，更接近于野生大麦。这些重复基元数目的差异导致了重复区序列长度和结构的变异。这种现象极可能是由于醇溶谷蛋白基因在进化过程中染色体的不平衡交换或复制滑动所造成的。对所克隆基因和禾本科代表性醇溶谷蛋白基因进行聚类分析，结果表明所有来自栽培大麦的B-hordeins聚类成一个亚家族，来自野生大麦的B-hordeins以及普通小麦的LMW-GS聚类成另外一个亚家族，表明这两个亚家族的成员存在显著差异。此外，我们发现B-hordein基因推测的C-末端序列具有一些有规律的特征：即具有相同C-末端序列的B-hordein基因在系统发生树中聚类为同一个亚组（除BXQ053，BZ09-1，BZ26-5分别单独聚为一类外）。这个特征将有助于我们对所有B组醇溶蛋白基因家族成员进行分类，避免了在SDS-PAGE电泳图谱上仅依靠大小分类的局限性。 2. 根据上述克隆的青稞B-hordein基因的5’端序列设计三条基因特异的反向引物，以青稞Z09和Z26的基因组DNA为模板，采用SON-PCR和TAIL-PCR技术分离克隆出8个B-hordein基因的上游调控序列（命名为Z09P和Z26P）。序列分析表明，推测的TATA box位于–80 bp，CAAT–like box位于–140 bp处。此外，Z09P和Z26P中有六个序列在–300 bp处均存在一个由高度保守的EM基序和类GCN4基序构成的胚乳盒(Endosperm Box，EB)，在约–560 bp处存在一个胚乳盒类似结构。而Z09P-2和Z26P-3不存在保守的胚乳盒或其类似结构，预示着这两个启动子所调控的基因表达可能受不同类型反式作用因子的调节，推测该启动子对基因的表达调控具有多样性。 3. 将B-hordein基因的开放阅读框定向克隆到表达载体pET-30a中，将其导入大肠杆菌表达菌株BL21中进行外源基因的诱导表达以验证所克隆基因的功能。结果表明仅含重组子pET-BZ07-2和pET-BZ26-5的BL21细菌有目的表达蛋白产生。在诱导3 h时的蛋白表达量最高；3 mM IPTG诱导的蛋白表达量要高于1 mM IPTG诱导的表达量。这为分离纯化B-hordein蛋白以及进一步研究其对大麦籽粒品质的影响奠定基础。 4. 根据从青稞Z09和Z26中分离克隆的B-hordein基因序列设计一对基因特异的引物，同时，选择大麦α-微管蛋白基因（GenBank no. U40042）为看家基因并设计特异引物，利用实时荧光定量PCR检测了青稞籽粒4个胚乳发育时间段的B-hordein基因表达，荧光定量结果显示：两份材料中B-hordein基因的表达量均随发育过程的进行而逐渐升高。Z09中B-hordein基因在开花后7天开始转录，而Z26开花4天后就有低水平B-hordein的表达，这表明Z26中B-hordein基因可能比Z09表达的较早或者Z09中B-hordein基因表达水平较低以致于不能被检测到。此外，在4个不同的胚乳发育时期中，Z26中B-hordein基因的表达量均高于Z09材料。在开花12天到18天的过程中，Z09和Z26中B-hordein基因的表达水平有一个急剧性的升高。这说明在不同胚乳发育时期，Hor2位点的B-hordein等位基因变异体存在mRNA的差异表达。 Seed endosperm storage proteins in higher plants are the main resources of nitrogen for germinating and plant proteins for human and animals. Barley prolamins (also called hordeins) are the major storage proteins in the endosperm and account for 50–60% of total proteins. Hordeins are classically divided into three groups: sulphur-rich (B, γ-hordeins), sulphur-poor (C-hordeins) and high molecular weight (HMW, D-hordeins) hordeins based on the size and composition. B-hordeins and C-hordeins are two major groups and each respectively account for about 70-80% and 10-12% of the total hordein fraction in barley endosperm. Genetic analysis showed that B-, C-, C-, γ-hordeins are encoded by Hor2, Hor1, Hor3 and Hor5 locus on the chromosome 1H (5). Hor2 locus is rich in alleles that encode numerous heterogeneous B-hordein polypeptides. It is reported that B-hordein species, quantity and distribution are significant factors affecting malting, food and feed quality of barley. To understand comprehensively the structure and organization of B-hordein gene family in hull-less barley and explore the developmental control mechanisms of Hor2 locus gene expression and eventually to better exploitation in crop grain quality improvement, we isolated and cloned B-hordein genes and promotors of hull-less barley from Qinghai-Tibet Plateau by PCR, and testified their expression founction in bacteria expression system and explore their spatial and temporal expression pattern by quantitative real time PCR. Our results are as followed, 1. Twenty-three copies of B-hordein gene were cloned from nine hull-less barley cultivars of Qinghai-Tibet Plateau with special B-hordein subunits and molecularly characterized by PCR, based on three B-hordein genes published previously (GenBank No. X03103, X53690 and X53691). DNA sequences analyses confirmed that the six clones all contained a full-length coding region of the barley B-hordein genes. Eleven clones all contain an in-frame stop codon and they are probably pseudogenes. The analysis of deduced amino acid sequences of the genes shows that they have similar structures including signal peptide domain, central repetitive domain, and C-terminal domain. The number of the repeats was largerly variable and resulted in polypeptides in different sizes or structures among the genes. Twelve such repeated motifs were found in Z07–2 and Z26, and they are close to those of the wild barleys, and it is most probably caused by unequal crossing-over and/or slippage during replication as suggested for the evolution of other prolamins. The relatedness of prolamin genes of barley and wheat was assessed in the phylogenetic tree based on their polypeptides comparison. Our phylogenetic analysis suggested that the predicted B-hordeins of cultivated barley formed a subfamily, while the B-hordeins of wild barleys and the two most similar sequences of LMW-GS of T. aestivum formed another subfamily. This result indicated that the members of the two subfamilys have a distinctive difference. In addition, we found the B-hordeins with identical C-terminal end sequences were clustered into a same subgroup (except BXQ053，BZ09-1 and BZ26-5 as a sole group, respectively), so we believe that B-hordein gene subfamilies possibly can be classified on the basis of the conserved C-terminal end sequences of predicted polypeptide and without the limit of SDS-PAGE protein banding patterns. 2. The specific primers were designed according to the published sequences of barley B-hordein genes from Z09 and Z26. Using total DNA isolated from them as the templates, eight clones (designated Z09Pand Z26P) of upstream sequences of the known B-hordein genes was obtained by TAIL-PCR and SON-PCR. Sequences analysis shows that the putative TATA box was present at position –80 bp and CAAT-like box at position –140 bp. Besides, a putative Endosperm Box including an Endosperm Motif (EM) and a GCN4-Like Motif was found at position –300 bp in six clones, and another Endosperm-like box was found at positon –560 bp. While the Endosperm Box or Endosperm-like box was not found in Z09P-2 and Z26P-3. This may indicate that gene expression drived by the two promtors was probably controlled by different trans-acting factors and the genetic control mechanism of corresponding gene expression may be diverse. 3. The B-hordein genic region coding for the mature peptide was cloned into expression vector pET-30a and transformed into bacterial strain BL21 for identifying gene expression fountion. Protein SDS–PAGE analysis showed that only the transformed lysate with the pET-BZ07-2 and pET-BZ26-5 constructs produced proteins related to B-group hordeins of barley, and the mounts of proteins induced by 3 mM IPTG and 3 h were higher than other conditions. This established a base for isolating and putifying B-hordein and further exploring their effects on barley grain quality. 4. The gene-specific primers of B-hordein genes from Z09 and Z26 were used for the quantification of B-hordein gene expression. The α-tubulin gene from Hordeum vulgare subsp. vulgare (GenBank accession number U40042) was used as a control gene. The result shows the transcription of the B-hordein genes in Z09 was found 7 days after flowering, while the transcription of the B-hordein genes in Z26 was found 4 days after flowering, but at a very low level, and it suggested that the B-hordein genes in Z26 probably expressed earlier than those in Z09, or the B-hordein genes in Z09 expressed at so a lower level than Z26 that it can not detected. In addition, B-hordein genes in Z26 accession showed higher expression levels than those in Z09 in four developing stages. Furthermore, a progressive increase in the expression levels of the B-hordein genes between 12 and 18 days after anthesis was observed in both Z09 and Z26. It implies that the B-hordein allelic variants encoded by Hor2 locus exist the differential expression in mRNA levels of during barley endosperm development.

长白山森林生态系统中的稀有和濒危多孔菌

In last 10 years,extensive field inventories were carried out to investigate Polypore species, the major wood decaying fungi in the Changbaishan Nature Reserve of Northeastern China. The following 27 species were treated as rare or threathened species: Amylocystis lapponica (Romell) Singer, Anomoporia albolutescens (Romell) Pouzar, Anomoporia bombycina (Fr.) Pouzar, Anomoporia vesiculosa Y.C. Dai & Niemel, Antrodia carbonica (Overh.) Ryvarden & Gilb., Antrodia crassa (P. Karst.) Ryvarden, Antrodiella citrinella Niemel & Ryvarden, Diplomitoporus flavescens (Bres.) Dománski, Donkioporia expansa (Desm.) Kotl. & Pouzar, Gloeophyllum carbonarium (Berk. & M.A. Curtis) Ryvarden, Haploporus odorus (Sommerf.) Bondartsev & Singer, Inonotopsis subiculosa (Peck) Parmasto, Nigroporus ussuriensis (Bondartsev & Ljub.) Y.C. Dai & Niemela, Oxyporus sinensis X.L. Zeng, Parmastomyces taxi (Bondartsev) Y.C. Dai & Niemela, Phellinidium sulphurascens (Pilat) Y.C. Dai, Phellinus vaninii Ljub., Polyporus vassilievae Thorn, Pycnoporellus fulgens (Fr.) Donk, Skeletocutis brevispora Niemela, Skeletocutis ochroalba Niemela, Skeletocutis perennis Ryvarden, Trechispora candidissima (Schwein.) Bondartsev & Singer, Wolfiporia dilatohypha Ryvarden & Gilb., Wolfiporia curvispora Y.C. Dai, Wrightoporia avellanea (Bres.) Pouzar and Wrightoporia lenta (Oveh. & J. Lowe) Pouzar. Polypores are richer in East Asia than in Europe and North America, not only because of destructive galciations and fewer hosts in the latters, but also because of the geography. NE Asia is a link between Europe and North America. Changbaishan Nature Reserve is very rich in polypores, and over 260 species were recorded in the reserve. Some rare species in North America and Europe, for instance, Anomoporia albolutescens, Antrodia crassa, Diplomitoporus flavescens, Inonotopsis subiculosa and Skeletocutis ochroalba etc. were found in Changbaishan Nature Reserve as well, and these species are in fact rare in the earth. Most of the 27 species occurred on fallen trunks or rotten wood in the reserve, but some of them grew on living trees. 18 species occured on substrate of gymnosperms, and 9 species grew on wood of angiosperm.Among the 27 species, 7 species caused a brown rot,and 20 species produced a white rot. The morphology, substrate and ecology of each species were briefly discussed. The most important tool for polypore conservation is the conservation of their habitats, and it is necessary to study the ecology of the rare and threathened species of polypores in the Changbaishan Nature Reserve. Because most of polypores live on the substrate of fallen trunks and rotten wood, it is very important to keep such substrate in the ecosystem.

Evidence for positive selection in phycoerythrin genes of red algae and cyanobacteria Prochlorococcus and Synechococcus

Because of the shortage of phycoerythrin (PE) gene sequences from rhodophytes, peBA encoding beta- and alpha-subunits of PE from three species of red algae (Ceramium boydenn, Halymenia sinensis, and Plocamium telfariae) were cloned and sequenced. Different selection forces have affected the evolution of PE lineages. 8.9 % of the codons were subject to positive selection within the PE lineages (excluding high-irradiance adapted Prochlorococcus). More than 40 % of the sites may be under positive selection, and nearly 20 % sites are weakly constraint sites in high-irradiance adapted Prochlorococcus. Sites most likely undergoing positive selection were found in the chromophore binding domains, suggesting that these sites have played important roles in environmental adaptation during PE diversification. Moreover, the heterogeneous distribution of positively selected sites along the PE gene was revealed from the comparison of low-irradiance adapted Prochlorococcus and marine Synechococcus, which firmly suggests that evolutionary patterns of PEs in these two lineages are significantly different.

The relation between distribution of zooplankton and salinity in the Changjiang Estuary

Seasonal netzplankton samples from stations in the Changjiang (Yangtze River) Estuary were collected from May, 2004 to February, 2005. The dominant species and their contribution to the total zooplankton abundance were determined. Moreover, the relationship between the salinity and abundance was studied with stepwise linear regression. During the whole year, the salinity was positively correlated with the abundance, while the temperature, negatively. Linear regression analysis showed also a high positive correlation with salinity for total abundance in August and November, while in February and May, no obvious relations were found. The most abundant community was composed of neritic and brackish-water species. The North Passage (NP) (salinity <5) was greatly diluted by freshwater while the North Branch (NB) was brackish water with salinity range of 12-28. Consequently, clear decline in abundance of zooplankton was along the estuarine haloclines from the maximum in the area of high salinity to the minimum in the limnetic zone. Total zooplankton abundance and biomass were lower in NP than the NB in all seasons. In short, the salinity influenced the abundance of each species of zooplankton, and ultimately determined the total abundance of zooplankton. Furthermore, a winter peak in the abundance existed, which might be caused by the flourishing of Sinocalanus sinensis, a widely distributed species in the Changjiang Estuary.

Molecular cloning and characterization of a serine proteinase homolog prophenoloxidase-activating factor in the swimming crab Portunus trituberculatus

Serine proteinase homologues (SPHs), as one of prophenoloxiase-activating factors (PPAFs), play critical roles in innate immunity of crabs. Based on an EST from the eyestalk full length cDNA library, the complete cDNA (designated as PtSPH) and genomic DNA of SPH from the swimming crab Portunus trituberculatus were cloned in this study. The estimated molecular weight of mature PtSPH (354 amino acids) was 38.7 kDa and its isoelectric point was 5.08. Multiple sequence alignment revealed that PtSPH lacked a catalytic residue with a substitution of Ser in the active site triad to Gly. Phylogenetic analysis indicated PtSPH together with PPAFs of Callinectes sapidus (AAS60227), Eriocheir sinensis (ACU65942), Penaeus monodon (ABE03741, ACP19563) and Pacifastacus leniusculus (ACB41380), formed a distinct cluster which only included clip-SPHs. As the first analyzed genomic structure of PPAFs in crustaceans, two introns were found in the open reading frame region of this gene. The mRNA transcripts of PtSPH could be detected in all the examined tissues, and were higher expressed in the eyestalk than that in gill, hepatopancreas, haemocytes and muscle. Accompanied with the change in phenoloxidase (PO) activity and total haemocyte counts, the temporal expression of PtSPH gene in haemocytes after Vibrio alginolyticus challenge demonstrated a clear time-dependent expression pattern with two peaks within the experimental period of 32 h. These findings suggest that PtSPH is involved in the antibacterial defense mechanism of Portunus tritubercualtus crab. (C) 2010 Elsevier Ltd. All rights reserved.

长江口北港和北支浮游动物群落生态学比较研究

浮游动物是河口生态系统的重要组成部分，在食物网中，浮游动物是浮游植物捕食者，对浮游植物有摄食压力，所以控制浮游植物数量的增长。同时，浮游动物还是鱼类的饵料，从而影响渔业资源的数量。长江口是各种经济鱼、虾和蟹的重要产卵场、索饵场和洄游场。长江口各个分汊的分流量的差异较大，导致不同分汊的水文环境明显不同，其中最为明显就是北港和北支水域。然而以往对浮游动物的研究仅限于某一水域，没有对整体水域进行研究，本文选择最具代表性的北港和北支水域，对两水域浮游动物的群落生态特征进行比较研究。 本论文的数据来源于2004年5、8、11月和2005年2月在长江口北港和北支水域4个航次的海洋综合调查资料。通过采用优势度和优势种贡献率等生态学指标，同时结合逐步回归分析，讨论了温、盐与浮游动物总丰度变化的关系。结果表明，就四季而言，浮游动物总丰度和盐度呈显著正相关，和温度负相关。而就单个季节而言，除了5月和2月落潮，总丰度和盐度均呈显著正相关，与温度相关关系不显著。调查水域优势种主要为河口半咸水种或近海种。北港的盐度约为0-5, 表现为长江淡水特征；北支的盐度约为12-28，表现为长江径流和外海水团混合水团的特征。上述优势种的盐度适应和水团分布特征决定了长江口浮游动物分布的时空变化，即盐度较高的水域往往有较高的丰度，北支的总丰度和生物量均大于北港。此外，在长江口口内水域，水温较低的枯水期，浮游动物丰度高于水温较高的丰水期，温度的季节波动，以及主要优势种中华华哲水蚤（Sinocalanus sinensis）对低温环境的适应，是调查水域浮游动物总丰度季节变化的重要因素。 另一方面，本论文通过物种多样性、累积优势度曲线等群落水平的指标和相似性检验分析（ANOSIM），对长江口北港和北支浮游动物群落及其主要优势种的差异，以及主要生态因子对浮游动物群落的影响进行了分析。结果表明，北港主要由潮汐影响的淡水和低盐水组成，北支由中、高盐水组成。春季，北港浮游动物丰度和多样性均低于北支，主要优势种为中华华哲水蚤；北支优势种种数较多，主要是真刺唇角水蚤（Labidocera euchaeta）。夏季，北港和北支的多样性较接近，但是种类组成差别较大，北港以中华华哲水蚤和太平洋纺锤水蚤（Acartia pacifica）为主构成河口半咸水群落，北支以由火腿许水蚤（Schmackeria poplesia）、虫肢歪水蚤（Tortanus vermiculus）和太平洋纺锤水蚤等构成河口低盐群落。秋季，北港的丰度和多样性均低于北支，两个水域的群落差异明显，北港主要由中华华哲水蚤构成，北支由小拟哲水蚤（Paracalanus parvus）、针刺拟哲水蚤（Paracalanus aculeatus）、真刺唇角水蚤和中华哲水蚤（Calanus sinicus）等近岸和外海种组成。冬季，两个水域种数和多样性均较低，群落差别达四季最小，中华华哲水蚤占绝对优势。温度和盐度及其相互作用是决定长江口浮游动物群落特征的最主要因素。其中温度是造成研究水域浮游动物群落季节变化的主要因素，而由径流和外海水之间的消长引起的盐度变化是造成北港和北支浮游动物群落区域变化的决定因素。

红藻无性繁殖系的诱导及其发育机制的初步研

以红藻中的角叉菜（Chondrus ocellatus）、龙须菜（Gracilaria lemaneiformis）、真江蓠(Gracilaria asiatica)和海膜（Halymenia sinensis）为材料，观察了红藻幼苗的早期发育，通过组织培养构建无性繁殖系，并初步探讨了红藻无性繁殖系的发育及分化机理，为海藻无性繁殖系的获得提供理论基础和依据。 在室内进行了角叉菜的四分孢子和果孢子的细胞培养，并观察其早期发育过程。结果表明，四分孢子和果孢子的早期发育是相似的，可主要分为三个阶段：早期分裂阶段、盘状体阶段和直立体形成阶段。 切段组织培养表明，红藻无性繁殖系的获得主要通过两种途径：一种为切段组织经过培养可直接形成再生植株；另一种为切段组织经培养脱分化，诱导出愈伤组织或类愈伤组织，愈伤组织或类愈伤组织再分化，形成盘状体，盘状体继续发育即可形成再生植株。 通过切段组织培养，获得了龙须菜和真江蓠再生植株。在PES培养液中，添加6－BA（0.25 mg/L）对龙须菜切段组织再生新枝的诱导有促进作用，诱导率可高达84.4％，高浓度的IAA或6－BA（4 mg/L）对切段组织有损伤作用。实验证明伤口大小对切段组织再生新枝有影响，且伤口太大对再生新枝的形成不利。龙须菜的切段组织培养过程中表现出极性。 通过组织培养，诱导出海膜类愈伤组织—丝状体。添加植物生长调节类物质（IAA 和 6-BA）对海膜丝状体的诱导无促进作用。海膜切片在消毒海水中培养即可获得丝状体。海膜丝状体的外植体来源主要有两个：一是健康的藻体； 另一是盘状体，其丝状体的诱导率分别为80％ 和90％。筛选出了丝状体适宜的生长条件：13－23℃，10－15 μE•m−2• s−1，12h：12h（Light: Dark），其中18℃为最佳生长温度。高的光照强度（50 μE•m−2•s−1）对丝状体产生损伤作用。 红藻无性繁殖系的发育途径，根据其获得途径也有两种情况。经过切段组织培养直接获得的无性繁殖系，是切段切口处已分化的细胞表现其全能性，恢复分裂能力，再生新枝，切段表现出极性。极性的上端产生新枝，下端形成固着器，成为一个完整的植株。经过愈伤组织和类愈伤组织获得的无性繁殖系，是切口处已分化的细胞表现其全能性，经脱分化形成愈伤组织和类愈伤组织，附着在基质上后，再分化形成盘状体，按照孢子的早期发育途径，形成直立体幼苗。 通过SDS-聚丙烯酰胺凝胶电泳分析，对龙须菜正常藻体及无性繁殖系发育过程中蛋白的表达进行检测，检测出表达差异的蛋白质，推测这两个蛋白可能与龙须菜切段组织再生有关，其中30 KD的蛋白仅在再生新枝中表达，150 KD和125 KD的蛋白仅在正常生长的龙须菜和龙须菜切段的极性下端中表达。 根据高等植物中与萌芽、分生组织以及愈伤组织发育相关的基因序列保守区设计了五对特异引物，通过PCR和RT-PCR扩增检测及DNA测序分析，对红藻无性繁殖系早期发育相关的基因序列，进行了初步分析。

牡蛎的比较解剖学及系统分类和演化的研究

本文对我国己发表的牡蛎作了详细的比较解剖学研究。在强蛎亚科（Pycnodonteinae）发现了第三个心耳－－右上心耳和与其相连的第三条回心静脉－－后静脉，这在双壳类中实属首次报道。第一次提出了牡蛎循环系统的两种类型，附心脏型和无附心脏型。两者之间的主要区别是：前者无肌套血管，其外套血液主要来自环外套动脉和附心脏，而后者由于无附心脏和环外套动脉，其外套血液主要来自肌套血管；前者是通过出鳃静脉和外套静脉分别将鳃前部和后部的血液送回心耳，而后者的外套静脉与外入鳃血管不通，鳃中的血液只能通过出鳃静脉回到心耳。根据外套腔的形态特点，本文将中国的牡蛎分为三种类型六个组。第一种类型，左右侧都具侧水腔，包括一个组；第二种类型，仅右侧具有侧水腔，包括四个组；第三种类型；不具侧水腔，包括一个组。在比较解剖学研究的基础上，文章还讨论了消化系统，神经系统，循环系统等一些主要系统的演化过程，并推测了现生牡蛎各属间的演化关系。提出了一些新的分类依据，发现了一个具有重要演化意义的单行属种，爪蛎属（Talonostrea），猫爪牡蛎（T. talonata）。澄清了目前世界上在舌骨蛎属（Hyotissa）、拟舌骨蛎属（Parahyotissa）、小蛎属（Saccostrea）和巨蛎属（Crassostrea）分类中的混乱。解决了我国牡蛎分类中存在己久的疑难问题，将己发表的20种牡蛎重新鉴定为15种，即舌骨牡蛎（Hyotissa hyotis），复瓦牡蛎（Parahyotissa imbricata）。中华牡蛎（P. sinensis），鸡冠牡蛎（Lopha cristagalli）。薄片牡蛎（Dendostren folium），缘齿牡蛎（D. cre-nulifera），褶牡蛎（Alectryonella plicatula），猫爪牡蛎（T. talonata），长牡蛎（Crassostrea gigas），近江牡（C. rivularis），拟近江牡蛎（Crassostrea sp.），僧帽牡蛎（Saccostrea cucullata），棘刺牡蛎（S. echinata），鹅掌牡蛎（Planostrea pestigris）和密鳞牡蛎（Ostrea denselamellosa）。它们分别隶属于二个科，曲蛎科（Grypheidae）和牡蛎科（Ostreidae）；四个亚科，强蛎亚科（Pycnodonteinae）。冠蛎亚科（Pycnodonteinae），巨蛎亚科（Lopheinae）和牡蛎亚科（Crassostreinae）。

基于叶绿体DNA trnL-F序列研究肋果沙棘的谱系地理学

由于青藏高原的地理效应,第四纪冰期气候的反复变化应对现今该地区生物的地理分布及其居群遗传结构产生重大影响。肋果沙棘Hippophae neurocarpa是青藏高原地区的一个特有种,根据叶上的附属物（星状鳞毛或者鳞片状鳞毛）分为两个亚种：肋果沙棘亚种subsp.neurocarpa和密毛肋果沙棘亚种subsp.stellatopilosa。依据母系遗传的叶绿体DNA片段对该物种谱系地理学进行研究不仅能阐明该物种冰期避难所,而且对于理解两个亚种的母系分化也具有重要意义。共对两个亚种14居群的70个个体的trnL-F序列进行了测序,共发现8种单倍型,其中5种单倍型出现在肋果沙棘亚种中,4种出现在密毛肋果沙棘亚种中,两个亚种共享一种单倍型。种内谱系分化与两个亚种形态上的分化不一致。嵌套进化分支把8种单倍型分为三支：一支为肋果沙棘亚种,其他两支中两个亚种单倍型嵌套组成,且肋果沙棘亚种处于进化末端。我们的研究结果还表明肋果沙棘在冰期可能在高海拔地区存在多个避难所,并且存在来自避难所的邻域扩张。

Summer diet of two sympatric species of raptors Upland Buzzard (Buteo hemilasius) and Eurasian Eagle Owl (Bubo bubo) in alpine meadow: problem of coexistence

Summer diets of two sympatric raptors Upland Buzzards (Buteo hemilasius Temminck et Schlegel) and Eurasian Eagle Owls (Bubo bubo L. subsp. Hemachalana Hume) were studied in an alpine meadow (3250 m a.s.l.) on Qinghai-Tibet Plateau, China. Root voles Microtus oeconomus Pallas, plateau pikas Ochotona curzoniae Hodgson, Gansu pikas O. cansus Lyon and plateau zokors Myospalax baileyi Thomas were the main diet components of Upland Buzzards as identified through the pellets analysis with the frequency of 57, 20, 19 and 4%, respectively. The four rodent species also were the main diet components of Eurasian Eagle Owls basing on the pellets and prey leftovers analysis with the frequency of 53, 26, 13 and 5%, respectively. The food niche breadth indexes of Upland Buzzards and Eurasian Eagle Owls were 1.60 and 1.77 respectively (higher value of the index means the food niche of the raptor is broader), and the diet overlap index of the two raptors was larger (C-ue = 0.90) (the index range from 0 - no overlap - to I - complete overlap). It means that the diets of Upland Buzzards and Eurasian Eagle Owls were similar (Two Related Samples Test, Z = -0.752, P = 0.452). The classical resource partitioning theory can not explain the coexistence of Upland Buzzards and Eurasian Eagle Owls in alpine meadows of Qinghai-Tibet Plateau. However, differences in body size, predation mode and activity rhythm between Upland Buzzards and Eurasian Eagle Owls may explain the coexistence of these two sympatric raptors.

Molecular evidence for double maternal origins of the diploid hybrid Hippophae goniocarpa (Elaeagnaceae)

Homoploid hybrid plant species are rare, and the mechanisms of their speciation are largely unknown, especially for homoploid hybrid tree species. Two contrasting hypotheses have been proposed to explain the origin of Hippophae goniocarpa: (1) it is a diploid hybrid originating from H. rhamnoides ssp. sinensis x H. neurocarpa ssp. neurocarpa, and (2) it originated via marginal differentiation from H. rhamnoides ssp. sinensis. Regardless of which of these hypotheses is true (if either), previous studies have suggested that H. rhamnoides ssp. sinensis is the only maternal donor for this hybrid species. In this study, we aim to elucidate the maternal composition of H. goniocarpa and to test the two hypotheses. For this purpose, we sequenced the maternal chloroplast DNA trnL-F region of 75 individuals representing H. goniocarpa, H. rhamnoides ssp. sinensis, and H. neurocarpa ssp. neurocarpa in two co-occurring sites of the taxa. Seven haplotypes were identified from three taxonomic units, and their phylogenetic relationships were further constructed by means of maximum parsimony, maximum likelihood, and network analyses. These seven haplotypes clustered into two distinct, highly divergent lineages. Two haplotypes from one lineage were found in H. rhamnoides ssp. sinensis, and five (representing the other lineage) in H. neurocarpa ssp. neurocarpa. Hippophae goniocarpa shared four common haplotypes from both lineages, but the haplotypes detected from the two populations differed to some extent, and in each case were identical to local haplotypes of the putative parental species. Thus, both H. rhamnoides ssp. sinensis and H. neurocarpa ssp. neurocarpa appear to have together contributed to the maternal establishment of H. goniocarpa. These results clearly demonstrate that the marginal origin hypothesis should be rejected, and support the hybrid origin hypothesis. Hippophae goniocarpa exhibits a sympatric distribution with its two parent species, without occupying new niches or displaying complete ecological isolation. However, this species has effectively developed reproductive isolation from its sympatric parent species. Our preliminary results suggest that H. goniocarpa may provide a useful model system for studying diploid hybrid speciation in trees. (c) 2008 The Linnean Society of London.

中国北方典型生态区表土孢粉组合特征及其与现代植被和气候的关系

Surface pollen assemblages and their relationhips with the modern vegetation and climate provide a foundation for investigating palaeo-environment conditions by fossil pollen analysis. A promising trend of palynology is to link pollen data more closely with ecology. In this study, I summarized the characteristics of surface pollen assemblages and their quantitative relation with the vegetation and climate of the typical ecological regions in northern China, based on surface pollen analysis of 205 sites and investigating of modern vegetation and climate. The primary conclusions are as follows:The differences in surface pollen assemblages for different vegetation regions are obvious. In the forest communities, the arboreal pollen percentages are more than 30%, herbs less than 50% and shrubs less than 10%; total pollen concentrations are more than 106 grains/g. In the steppe communities, arboreal pollen percentages are generally less than 5%; herb pollen percentages are more than 90%, and Artemisia and Chenopodiaceae are dominant in the pollen assemblages; total pollen concentrations range from 103 to 106 grains/g. In the desert communities, arboreal pollen percentages are less than 5%. Although Chenopodiaceae and Artemisia still dominate the pollen assemblages, Ephedra, Tamaricaceae and Nitraria are also significant important in the pollen assemblages; total pollen concentrations are mostly less than 104grains/g. In the sub-alpine or high and cold meadow communities, arboreal pollen percentages are less than 30%. and Cyperaceae is one of the most significant-taxa in the pollen assemblages. In the shrub communities, the pollen assemblages are consistent with the zonal vegetation; shrub pollen percentages are mostly less than 20%, except for Artemisia and Hippophae rhamnoides communities.There are obvious trends for the pollen percentage ratios of Artemisia to Chenopodiaceae (A/C), Pinus to Artemisia (P/A) and arbor to non-arbor (AP/NAP) in the different ecological regions. In the temperate deciduous broad-leaved forest region, the P/A ratios are generally higher than 0.1, the A/C ratios higher than 2 and the AP/NAP ratios higher than 0.3. In the temperate steppe regions, the P/A ratios are generally less than 0.1, the A/C ratios higher than 1 and the AP/NAP ratios less than 0.1. In the temperate desert regions, the P/A ratios are generally less than 0.1, the A/C ratios less than 1, and the AP/NAP ratios less than 0.1.The study on the representation and indication of pollen to vegetation shows that Pinus, Artemisia, Betula, Chenopodiaceae, Ephedra, Selaginella sinensis etc. are over-representative in the pollen assemblages and can only indicate the regional vegetation. Some pollen types, such as Quercus, Carpinus, Picea, Abies, Elaeagus, Larix, Salix, Pterocelis, Juglans, Ulmus, Gleditsia, Cotinus, Oleaceae, Spiraea, Corylus, Ostryopsis, Vites, Tetraena, Caragana, Tamaricaceae, Zygophyllum, Nitraria, Cyperaceae, Sanguisorba etc. are under-representative in the pollen assemblages, and can indicate the plant communities well. Populus, Rosaceae, Saxifranaceae, Gramineae, Leguminosae, Compositae, Caprifoliaceae etc. can not be used as significant indicators to the plants.The study on the relation of pollen percentages with plant covers shows that Pinus pollen percentages are more than 30% where pine trees exist in the surrounding region. The Picea+Abies pollen percentages are higher than 20% where the Picea+Abies trees are dominant in the communities, but less than 5% where the parent plants are sparse or absent. Larix pollen percentages vary from 5% to 20% where the Larix trees are dominant in the communities, but less than 5% where the parent plants are sparse or absent. Betula pollen percentages are higher than 40% where the Betula trees are dominant in the communities" but less than 5% where the parent plants are sparse or absent. Quercus pollen percentages are higher than 10% where the Quercus trees are dominant in the communities, but less than 1% where the parent plants sparse or absent. Carpinus pollen percentages vary from 5% to 15% where the Carpinus trees are dominant in the communities, but less than 1% where the parent plants are sparse or absent. Populus pollen percentages are about 0-5% at pure Populus communities, but cannot be recorded easily where the Populus plants mixed with other trees in the communities. Juglans pollen accounts for 25% to 35% in the forest of Juglans mandshurica, but less than 1% where the parent plants are sparse or absent. Pterocelis pollen percentages are less than 15% where the Pterocelis trees are dominant in the communities, but cannot be recorded easily where the parent plants are sparse or absent. Ulmus pollen percentages are more than 8% at Ulmus communities, but less than 1% where the Ulmus plants mixed with other trees in the communities. Vitex pollen percentages increase along with increasing of parent plant covers, but the maximum values are less than 10 %. Caragana pollen percentages are less than 20 % where the Caragana plant are dominant in the communities, and cannot be recorded easily where the parent plants are sparse or absent. Spiraea pollen percentages are less than 16 % where the Spiraea plant are dominant in the communities, and cannot be recorded easily where the parent plants are sparse or absent.The study on the relation of surface pollen assemblages with the modern climate shows that, in the axis 1 of DCA, surface samples scores have significant correlation with the average annual precipitations, and the highest determination coefficient (R2) is 0.8 for the fitting result of the third degree polynomial functions. In the axis 2 of DCA, the samples scores have significant correlation with the average annual temperatures, average July temperatures and average January temperatures, and the determination coefficient falls in 0.13-0.29 for the fitting result of the third degree polynomial functions with the highest determination coefficient for the average July temperature.The sensitivity of the different pollen taxa to climate change shows that some pollen taxa such as Pinus, Quercus, Carpinus, Juglans, Spiraea, Oleaceae, Gramineae, Tamariaceae and Ephedra are only sensitive to the change in precipitation.

Improved performance of comprehensive two-dimensional HPLC separation of traditional Chinese medicines by using a silica monolithic column and normalization of peak heights

Performance of comprehensive two-dimensional liquid chromatography system is greatly improved than we reported previously by using a silica monolithic column as for the second dimensional separation. Due to the increase of the elution speed on the second dimensional monolithic column, the first dimensional column efficiency and analysis rate can be greatly improved as comparing with conventionally second dimensional column. The developed system was applied to analysis of methanol extraction of two umbelliferae herbs Ligusticum chuanxiong Hort. and Angelica sinensis (Oliv.) Diels by using CN column as for the first dimensional separation and a silica monolithic ODS column for the second dimensional separation, and the obtained three-dimensional chromatograms were treated by normalization of peak heights with the value of the highest peak or setting a certain value using a software written in-house. It was observed that much more peaks for low-abundant components in TCM extract can clearly be detected here than we reported before, due to the large difference for the amount of components in TCMs' extract. With the above improvements in separation performance and data treatment, totally about 120 components in methanol extraction of Rhizoma chuanxiong and 100 in A. sinensis were separated with UV detection within 130 min. This result meant that both the number of peaks detected increase twice but the analysis time decease twice if comparing with the previously reported result. (c) 2005 Published by Elsevier B.V.

A cultura da laranjeira no Amazonas.

Informacoes tecnicas sobre producao de mudas de laranjeira, envolvendo: escolha do porta-enxerto, obtencao de sementes, sementeira, semeadura, viveiro (escolha da area, preparo da area e plantio), tratos culturais (irrigacao, adubacao, controle de plantas invasoras, desbrotas, controle das principais doencas e pragas no viveiro), enxertia (padroes minimos exigidos pelo Ministerio da Agricultura no Estado do Amazonas), instalacao do pomar, tratos culturais (capina, desbrota, fitossanidade, adubacao), poda, colheita, comercializacao, no Estado do Amazonas.

Tecnica de enxertia na producao de mudas de laranja.

A enxertia e um processo de multiplicacao vegetativa muito usado para especies frutiferas. Embora seja amplamente difundida e utilizada para laranja, a maioria dos citricultores do estado do Amazonas nao tem total dominio dessa tecnica.