Animal Toxins: How is Complexity Represented in Databases?

Peptide toxins synthesized by venomous animals have been extensively studied in the last decades. To be useful to the scientific community, this knowledge has been stored, annotated and made easy to retrieve by several databases. The aim of this article is to present what type of information users can access from each database. ArachnoServer and ConoServer focus on spider toxins and cone snail toxins, respectively. UniProtKB, a generalist protein knowledgebase, has an animal toxin-dedicated annotation program that includes toxins from all venomous animals. Finally, the ATDB metadatabase compiles data and annotations from other databases and provides toxin ontology.

Interior sense mobles. A l'entorn d'una possible hermenèutica en Adorno

Theodor W. Adorno construeix la modernitat com la fase final d'un procés d'emancipació que ha conduït justament al contrari del que es pretenia. L'alliberament del mite ha portat a una situació històrica en la qual l'encobriment ideològic del món és total. Això té conseqüències per a un pensament que vol ser crític, ja que haurà de trobar un lloc des d'on es pugui interpretar la història per tal de salvar la veritat d'un possible món diferent. En el moment de màxima ocultació ideològica i de màxim absurd -és conegut que Adorno es refereix al món contemporani com al temps després d'Auschwitz- Adorno intentarà entendre què ha passat amb aquest subjecte que s'ha preocupat excessivament per la seva identitat. Mitjançant l'aplicació del model psicoanalític d'interpretació a textos de Beckett i Kafka reconstruirà la història de l'emancipació fallida del subjecte modern. Amb aquestes interpretacions Adorno se situa no només molt a prop de la pràctica psicoanalítica, sinó també de la tradició hermenèutica clàssica.

Babel y la Biblioteca, máscaras del mito en la lingüística

Los manuales de historia de la lingüística tratan del mito bíblico de Babel y del nacimiento de la gramática en Alejandría de manos de Dionisio de Tracia. Estos pasajes de la historia, que corresponden a épocas diferentes, remiten a dos problemas fundamentales de la lingüística: por una parte, el origen del lenguaje y la diversidad lingüística; por la otra, la invención de la gramática como instrumento para la edición de textos y para el conocimiento formal de la lengua. Pese a las diferencias, Babel y la biblioteca de Alejandría tienen en común una naturaleza mítica. Sus relatos contienen elementos de la ficción y de la realidad que suelen pasar desapercibidos. El artículo señala estos elementos y establece ciertas afinidades entre Babel y la biblioteca, de suerte que articulados componen un ciclo narrativo. // Abstract.- Babel and the Library, the myth masks in Linguistics. History textbooks of linguistics explain the biblical myth of Babel and the birth of grammar in Alexandria at the hands of Dionysius Thrax. These passages of history, which correspond to different times, refer to two fundamental problems of linguistics: first, the origin of language and linguistic diversity and on the other, the invention of grammar as a tool for text editing and formal knowledge of the language. Despite the differences, Babel and the library of Alexandria share a mythical nature. These stories contain elements of fiction and reality that often go unnoticed. The article points out these elements and establishes affinities between Babel and the library, so that it should be considered as a narrative cycle. Keywords: Babel, Library of Alexandria, myth, story, grammar, institution, Dionysius Thrax.

Trypsin cleaves acid-sensing ion channel 1a in a domain that is critical for channel gating.

Acid-sensing ion channels (ASICs) are neuronal Na(+) channels that are members of the epithelial Na(+) channel/degenerin family and are transiently activated by extracellular acidification. ASICs in the central nervous system have a modulatory role in synaptic transmission and are involved in cell injury induced by acidosis. We have recently demonstrated that ASIC function is regulated by serine proteases. We provide here evidence that this regulation of ASIC function is tightly linked to channel cleavage. Trypsin cleaves ASIC1a with a similar time course as it changes ASIC1a function, whereas ASIC1b, whose function is not modified by trypsin, is not cleaved. Trypsin cleaves ASIC1a at Arg-145, in the N-terminal part of the extracellular loop, between a highly conserved sequence and a sequence that is critical for ASIC1a inhibition by the venom of the tarantula Psalmopoeus cambridgei. This channel domain controls the inactivation kinetics and co-determines the pH dependence of ASIC gating. It undergoes a conformational change during inactivation, which renders the cleavage site inaccessible to trypsin in inactivated channels.

Abundance and diversity of soil mites of fragmented habitats in a biosphere reserve in Southern Nigeria

Soil samples were collected from the top 7.5 cm of soil in a Strict Natural Reserve (SNR), a surrounding buffer zone, a cassava farm and matured plantations of Gmelina, teak, and pine, so as to determine if plantation establishment and intensive cultivation affect the density and diversity of soil mites. Altogether, 41 taxonomic groups of mites were identified. The diversity and densities of mites in within the SNR, the buffer zone and the Gmelina were more than the diversity and densities in the cassava farm, teak and pine plantations. Each plantation had its own unique community structure which was different from the community structure in the SNR plot. The SNR plot and Gmelina were dominated by detritivorous cryptostigmatid mites unlike teak and pine which were dominated by predatory mesostigmatid and prostigmatid mites respectively. Low cryptostigmatid mite densities in the plantations and cassava farm were seen as a consequence of low fertility status of the soil, the evidence of which was revealed by soil pH and organic matter data.

The cave (La caverna -1952-1969) by Josep Palau i Fabre: theatre versus philosophical allegory in order both to perform and stop the tragic and dark end of the bright art of thinking

What is the use of representing in performance the image of the cave from book VII of Plato’s Republic? Josep Palau i Fabre considers that in Plato’s dialogues the speakers are mere instruments at the service of his dialectical purpose. The aim of this article is to show how, by turning the myth into a tragedy and relying on Heraclitus’s conflict or war of opposites, the playwright succeeds in favouring a sort of thought which is not one-sided or univocal. On the contrary, in Palau i Fabre’s La Caverna, the tragic hero, the released prisoner transformed by the light of Reality and finally killed by his “cavemates” –after having been imprisoned again and having tried to rescue them from their ignorance or shadows– still leaves them his powerful experience of the agonistikós thought, which might bear fruit in their life to come.

Detection of three Allexivirus species infecting garlic in Brazil

Garlic viruses often occur in mixed infections under field conditions. In this study, garlic samples collected in three geographical areas of Brazil were tested by Dot-ELISA for the detection of allexiviruses using monoclonal specific antibodies to detect Garlic virus A (GarV-A), Garlic virus B (GarV-B), Garlic virus C (GarV-C) and a polyclonal antiserum able to detect the three virus species mentioned plus Garlic virus D (GarV-D). The detected viruses were biologically isolated by successive passages through Chenopodium quinoa. Reverse Transcriptase Polimerase Chain Reaction (RT-PCR) was performed using primers designed from specific regions of the coat protein genes of Japanese allexiviruses available in the Genetic Bank of National Center of Biotechnology Information (NCBI). By these procedures, individual garlic virus genomes were isolated and sequenced. The nucleotide and amino acid sequence analysis and the one with serological data revealed the presence of three distinct allexiviruses GarV-C, GarV-D and a recently described allexivirus, named Garlic mite-borne filamentous virus (GarMbFV), in Brazil.

Mites as biological tags of their hosts.

Movements and spatial distribution of host populations are expected to shape the genetic structure of their parasite populations. Comparing the genetic patterns of both interacting species may improve our understanding of their evolutionary history. Moreover, genetic analyses of parasites with horizontal transmission may serve as indicators of historical events or current demographic processes that are not apparent in the genetic signature of their hosts. Here, we compared mitochondrial variation in populations of the ectoparasitic mite Spinturnix myoti with the genetic pattern of its host, the Maghrebian bat Myotis punicus in North Africa and in the islands of Corsica and Sardinia. Mite mitochondrial differentiation among populations was correlated with both host mitochondrial and nuclear differentiation, suggesting spatial co-differentiation of the lineages of the two interacting species. Therefore our results suggest that parasite dispersal is exclusively mediated by host movements, with open water between landmasses as a main barrier for host and parasite dispersal. Surprisingly the unique presence of a continental European mite lineage in Corsica was inconsistent with host phylogeographical history and strongly suggests the former presence of European mouse-eared bats on this island. Parasites may thus act as biological tags to reveal the presence of their now locally extinct host.

Grècia i Egipte en l'origen del drama : el context sagrat

El llibre gira entorn de l’origen del drama com a espectacle. Fa una recerca de les arrels del gènere dramàtic tant a Egipte com a Grècia per observar-ne el context d’origen. Es constata que la música, el teatre i la dansa es vinculaven directament amb els primers drames sacres. Les experiències escèniques egípcies són comparades amb les incipients experiències teatrals gregues, que desembocarien en el naixement de la tragèdia. En aquest bressol, les figures d’Osiris i Dionís fonamenten el relat mític de les primeres representacions teatrals, on es produeix una connexió entre les pràctiques rituals, l'ús del mite com a expressió d'una conducta i la codificació dels seus continguts en un llenguatge escènic. També s’aborden les circumstàncies que van portar les experiències teatrals d'aquestes dues civilitzacions per camins diferents i van permetre assentar les bases del teatre occidental.

The importance of myth in contemporary art: myth, poetry and women

This project is intended to prove the prevalent importance of myth in contemporary art and, more specifically, to highlight how myth and poetry have shaped and reflected ideas of womanhood over time. A selection of significant literary periods, authors and works from the Renaissance to our days have been chosen in order to provide a wide scope of the evolution that the portrayal of women has undergone. Special attention has been paid to the way in which a group of selected poets have contributed to the construction and deconstruction of traditional Judeo-Christian and Greco-Roman myths strongly attached to patterns of male dominance.

El mito de Don Juan

Los griegos crearon su religión con tanta riqueza imaginativa que los mitos que la forman se han convertido en uno de los pilares fundamentales de nuestra cultura; se han recreado en todas las artes y seguirá haciéndose...

Occurrence of Aceria tosichella in Brazil

The objective of this work was to evaluate the occurrence of Aceria tosichella Keifer (Prostigmata: Eriophyidae), the wheat curl mite, in Rio Grande do Sul, Brazil. Samples to detect A. tosichella specimens were collected in wheat, corn, oat crops and potential host grasses in 46 localities, in October 2006, August and October 2007. Samples of wheat were also collected in experimental greenhouses at Embrapa Trigo, Passo Fundo, RS, Brazil. A. tosichella specimens were found in wheat samples from Passo Fundo, Palmeira das Missões, São Luís Gonzaga, and Santo Antônio das Missões, RS, Brazil. Symptoms due to A. tosichella infestations were observed only in greenhouse conditions. This is the first report of A. tosichella in Brazil and the second in South America.

Colonization by mites of glacier-free areas in King George Island, Antarctica

This work aimed to investigate the ratio of colonization by terrestrial mites on ice-free areas created by the ongoing climate-induced melting of Antarctic glaciers. Glacier retreat opens new ice-free areas for the colonization by vegetation and animals. The study was undertaken on the Antarctic Specially Protected Area no. 128 (West Coast of the Admiralty Bay, King George Island, South Shetlands Islands). Transects marked between the Ecology, Baranowski and Windy Glaciers, and a sea shore were used to collect soil samples. Oribatid mites were found only on near-shore areas, on patches of vegetation of more than 30 years of age. The colonization by mite communities is strongly determined by the presence of plants.

Oribatid mites and springtails from a coffee plantation in Sierra Sur, Oaxaca, Mexico

The objective of this work was to compare the oribatid mite and springtail communities in three plots with different soil use - Coffee (CP), secondary vegetation or fallow fields (acahual, A) and a cloud mountain forest (CMF) - within a coffee plantation located in Santa Maria Huatulco, Oaxaca State, Mexico. In each plot 20 samples (10 of soil, 10 of litter) were taken and processed in Berlese funnels. The extracted fauna was preserved in 70% ethanol. A total of 3,031 oribatid mites belonging to 33 species, and 1,177 specimens of springtails belonging to 43 species, were collected. The number of species recorded was: 27 at CP (14 oribatids; 13 springtails), 44 at A (19 oribatids; 25 springtails) and 62 at CMF (32 for each group). A total of 26 oribatid and 27 springtail species was found in the soil, and 25 oribatid and 32 springtail species were found in the litter. The most abundant species were the oribatids Rostroztes foveolatus (Haplozetidae), Tectocepheus sp. (Tecocepheidae), Karenella sp. (Oppidae), Atropacarus (Hoplophorella) cf. fonseciai (Phthiracaridae), Epilohmannia pallida americana (Epilohmannidae), and the springtails Ceratophysella cf. gibbosa (Hypogastruridae), Mesaphorura sp. (Tullbergidae) and Proisotoma cf. minuta (Isotomidae). Fourteen families and 18 species of Oribatida species and 5 families and 34 species of Collembola were recorded for the first time for the State.

Poesia de Josep Carner a Bèlgica: creació, revisió, selecció, traducció

Capítol 4 del llibre 'Josep Carner: l'exili del mite (1945-1970)', sobre la poesia publicada per Carner durant la seva llarga estada a Bèlgica.