An association rule-based method to support medical image diagnosis with efficiency

In this paper, we propose a method based on association rule-mining to enhance the diagnosis of medical images (mammograms). It combines low-level features automatically extracted from images and high-level knowledge from specialists to search for patterns. Our method analyzes medical images and automatically generates suggestions of diagnoses employing mining of association rules. The suggestions of diagnosis are used to accelerate the image analysis performed by specialists as well as to provide them an alternative to work on. The proposed method uses two new algorithms, PreSAGe and HiCARe. The PreSAGe algorithm combines, in a single step, feature selection and discretization, and reduces the mining complexity. Experiments performed on PreSAGe show that this algorithm is highly suitable to perform feature selection and discretization in medical images. HiCARe is a new associative classifier. The HiCARe algorithm has an important property that makes it unique: it assigns multiple keywords per image to suggest a diagnosis with high values of accuracy. Our method was applied to real datasets, and the results show high sensitivity (up to 95%) and accuracy (up to 92%), allowing us to claim that the use of association rules is a powerful means to assist in the diagnosing task.

Use of the real time RT-PCR for immune related gene expression quantitation in experimentally infected Neospora caninum bovine calves

Neospora caninum is one of the main causes of abortion and natimortality in cattle. Host immune defense is capable to inhibit tachyzoite activity during acute infection, but there is no action against bradyzoites in tissue cysts. Activation and modulation of this response is controlled by cell mediators. The real-time RT-PCR technique was employed to detect some of those mediators during N. caninum infection. Holstein and Nelore calves intramuscularly infected with tachyzoites and uninfected controls were slaughtered at the sixth day post-infection and popliteal lymph node, liver and brain cortex samples were analyzed. Real-time RT-PCR detected gene expression in all tissues. No significant variation of GAPDH gene expression was detected among groups, its amplification efficiency was similar to the other genes tested and it was used as the endogenous control for the analysis. Comparisons between infected and uninfected groups allowed the relative gene expression quantification. IFN-gamma and TNF-alpha genes showed increased expression in some samples. iNOS and TGF-beta 1 genes had some non-significant variations and IL-4 and IL-10 stayed pratically inaltered.

Post space debridement in oval-shaped canals: The use of a new ultrasonic tip with oval section

This study evaluates the effect on post space debridement in oval-shaped canals of an experimental ultrasonic tip with oval section (Satelec) compared with a circular ultrasonic tip (KaVo). Thirty teeth with an oval-shaped canal were endodontically treated and obturated and then randomly divided into 3 groups (n = 10) according to the procedure used for post space debridement: Satelec tip, Largo #2 drill + KaVo file, and Largo #2 drill + water. Debris and dentin tubules were evaluated by assigning scores to scanning electron microscope post spaces images; lower scores corresponded to fewer debris and higher number of open tubules. The Satelec group showed significantly lower debris and open tubules scores than KaVo group (p < .05) and control group (p < .05), which differed significantly between each other (p < .05). Also the debris and open tubules scores in different post space regions differed significantly among the experimental groups (p < .001). The oval ultrasonic tip resulted in a better post space debridement than a circular ultrasonic tip in oval-shaped canals.

Efficiency of delivery of DNA to cells by bovine papillomavirus type-1 L1/L2 pseudovirions

To investigate the efficiency of encapsidation of plasmid by papillomavirus virus-like particles (PV VLPs), and the infectivity of the resultant PV pseudovirions, Cos-1 cells were transfected with an 8-kb plasmid incorporating a green fluorescent protein (GFP) reporter gene (pGSV), and infected with bovine PV (BPV-1) L1/L2 recombinant vaccinia virus to produce BPV1 pseudovirions. Approximately 1 in 1.5x10(4) of dense (1.35 g/ml) PV pseudovirions and 0.3 in 10(4) Of less-dense (1.29 g/ml) pseudovirions packaged an intact pGSV plasmid. The majority (>75%) of packaged plasmids contained deletions, and the deletions affected all tested genes. After exposure of Cos-1 cells to BPV-1 pseudovirions at an MOI of 40,000:1, 6% of cells expressed GFP giving a calculated efficiency of delivery of the pGSV plasmid, by pseudovirions which had packaged an intact plasmid, of approximately 5%. Plasmid delivery was not effected by purified pGSV plasmid, was blocked by antiserum against BPV-1, and was not blocked by DNase treatment of pseudovirions, confirming that delivery was mediated by DNA within the pseudovirion. We conclude that a major limitation to the use of PV pseudovirions as a gene delivery system is that intact plasmid DNA is not efficiently selected for packaging by VLPs in cell-based pseudovirions production systems.

Quantitative PCR-ELAHA for the determination of retroviral vector transduction efficiency

Current methods to detect transduction efficiency during the routine use of integrating retroviral vectors in gene therapy applications may require the use of radioactivity and usually rely upon subjective determination of the results. We have developed two competitive quantitative assays that use an enzyme-linked, amplicon hybridization assay (ELAHA) to detect the products of PCR-amplified regions of transgene from cells transduced with Moloney murine leukemia virus vectors. The quantitative assays (PCR-ELAHA) proved to be simple, rapid, and sensitive, avoiding the need for Southern hybridization, complex histochemical stains, or often subjective and time-consuming tissue culture and immunofluorescence assays. The PCR-ELAHA systems can rapidly detect proviral DNA from any retroviral vector carrying the common selective and marker genes neomycin phosphotransferase and green fluorescent protein, and the methods described are equally applicable to other sequences of interest, providing a cheaper alternative to the evolving real-time PCR methods. The results revealed the number of copies of retrovector provirus present per stably transduced cell using vectors containing either one or both qPCR targets.

Biogeographical concordance and efficiency of taxon indicators for establishing conservation priority in a tropical rainforest biota

Prioritizing areas for conservation requires the use of surrogates for assessing overall patterns of biodiversity. Effective surrogates will reflect general biogeographical patterns and the evolutionary processes that have given rise to these and their efficiency is likely to lie influenced by several factors, including the spatial scale of species turnover and the overall congruence of the biogeographical history. We examine patterns of surrogacy for insects, snails, one family of plants and vertebrates from rainforests of northeast Queensland, an area characterized by high endemicity and an underlying history of climate-induced vicariance. Nearly all taxa provided some level of prediction of the conservation values For others. However, despite an overall correlation of the patterns of species richness and complementarity, the efficiency of surrogacy was highly asymmetric.. snails and insects were strong predictors of conservation priorities for vertebrates, but not vice versa. These results confirm predictions that taxon surrogates can be effective in highly diverse tropical systems where there is a strong history of vicariant biogeography, but also indicate that correlated patterns for species richness and/or complementarity do not guarantee that one taxon will be efficient as a surrogate for another. In our case, the highly diverse and narrowly distributed invertebrates were more efficient as predictors than the less diverse and more broadly distributed vertebrates.

Integrating technology to improve the efficiency of qualitative data analysis - A note on methods

Qualitative data analysis (QDA) is often a time-consuming and laborious process usually involving the management of large quantities of textual data. Recently developed computer programs offer great advances in the efficiency of the processes of QDA. In this paper we report on an innovative use of a combination of extant computer software technologies to further enhance and simplify QDA. Used in appropriate circumstances, we believe that this innovation greatly enhances the speed with which theoretical and descriptive ideas can be abstracted from rich, complex, and chaotic qualitative data. © 2001 Human Sciences Press, Inc.

Capacity utilisation and profitability: A decomposition of short-run profit efficiency

The principal aim of this paper is to measure the amount by which the profit of a multi-input, multi-output firm deviates from maximum short-run profit, and then to decompose this profit gap into components that are of practical use to managers. In particular, our interest is in the measurement of the contribution of unused capacity, along with measures of technical inefficiency, and allocative inefficiency, in this profit gap. We survey existing definitions of capacity and, after discussing their shortcomings, we propose a new ray economic capacity measure that involves short-run profit maximisation, with the output mix held constant. We go on to describe how the gap between observed profit and maximum profit can be calculated and decomposed using linear programming methods. The paper concludes with an empirical illustration, involving data on 28 international airline companies. The empirical results indicate that these airline companies achieve profit levels which are on average US$815m below potential levels, and that 70% of the gap may be attributed to unused capacity. (C) 2002 Elsevier Science B.V. All rights reserved.

Consensus neuropathological diagnosis of common dementia syndromes: testing and standardising the use of multiple diagnostic criteria

The aim of this study was to assess the variation between neuropathologists in the diagnosis of common dementia syndromes when multiple published protocols are applied. Fourteen out of 18 Australian neuropathologists participated in diagnosing 20 cases (16 cases of dementia, 4 age-matched controls) using consensus diagnostic methods. Diagnostic criteria, clinical synopses and slides from multiple brain regions were sent to participants who were asked for case diagnoses. Diagnostic sensitivity, specificity, predictive value, accuracy and variability were determined using percentage agreement and kappa statistics. Using CERAD criteria, there was a high inter-rater agreement for cases with probable and definite Alzheimer's disease but low agreement for cases with possible Alzheimer's disease. Braak staging and the application of criteria for dementia with Lewy bodies also resulted in high inter-rater agreement. There was poor agreement for the diagnosis of frontotemporal dementia and for identifying small vessel disease. Participants rarely diagnosed more than one disease in any case. To improve efficiency when applying multiple diagnostic criteria, several simplifications were proposed and tested on 5 of the original 210 cases. Inter-rater reliability for the diagnosis of Alzheimer's disease and dementia with Lewy bodies significantly improved. Further development of simple and accurate methods to identify small vessel lesions and diagnose frontotemporal dementia is warranted.

Urease inhibitor (NBPT) and efficiency of single or split application of urea in wheat crop

NBPT (N-(n-butyl) thiophosphoric triamide), a urease inhibitor, has been reported as one of the most promising compounds to maximize urea nitrogen use in agricultural systems. The objective of this study was to evaluate the performance of irrigated wheat fertilized with urea or urea + NBPT as single or split application. The experiment was conducted from June to October 2006 in Viçosa, MG, Brazil. The experimental design followed a 2×2 factorial scheme, in which urea or urea + NBPT were combined with two modes of application: full dose at sowing (60kg ha-1) or split (20kg ha-1 at sowing + 40kg ha-1 as topdressing at tillering), in randomized blocks with ten replications. The split application of nitrogen fertilization does not improve the yield wheat under used conditions. The use of urease inhibitor improves the grain yield of wheat crop when urea is applied in topdressing at tillering, but its use does not promote difference when urea is applied in the furrow at planting.

Use of Performance Measurement in the Public Sector: the case of the police service

Many public organisations have been under great pressure in recent years to increase the efficiency and transparency of outputs, to rationalise the use of public resources, and to increase the quality of service delivery. In this context, public organisations were encouraged to introduce the New Public Management reforms with the goal of improving the efficiency and effectiveness of the performance organisation through a new public management model. This new public management model is based on measurement by outputs and outcomes, a clear definition of responsibilities, the transparency and accountability of governmental activities, and on a greater value for citizens. What type of performance measurement systems are used in police services? Based on the literature, we see that multidimensional models, such as the Balanced Scorecard, are important in many public organisations, like municipalities, universities, and hospitals. Police services are characterised by complex, diverse objectives and stakeholders. Therefore, performance measurement of these public services calls for a specific analysis. Based on a nationwide survey of all police chiefs of the Portuguese police force, we find that employee performance measurement is the main form of measurement. Also, we propose a strategic map for the Portuguese police service.

Light pollution and energy efficiency: a case study of the village of Vialonga

Since industrialization and the formation of larger urban centers in the nineteenth century, pollution of the environment was always present in daily life in various ways, namely in the form of light. Light pollution can cause various consequences, both for humans and for their ecosystem, producing effects on environmental, social, economic and scientific level. In Portugal, the lighting is responsible for 3% of total electricity consumption, energy costs are in some cases more than 50% towards the costs incurred by municipalities with energy, checking-in recent years a trend similar to that improvement of illumination levels in the region (about 4 to 5% per year). Proper use of lighting brings many benefits both to the citizen and environment, since greater energy efficiency can contribute to reducing CO2 emissions, energy costs, as well as to decrease the use of resources not-renewable and/or contamination of renewable resources, which can occurs in the process of obtaining electricity. The present study has a main goal to analyze the illuminance levels associated to the public lighting of the village of Vialonga, Vila Franca de Xira (Portugal), to verify if it is efficient. The aim is also to relate the efficiency of street lighting with the existence of light pollution.

Efficiency Measures in the Agricultural Sector: The Beginning

Copyright © 2013 Springer Netherlands.

Evaluating the efficiency of a vegetal coagulant in the treatment of industrial effluents

The present work aims at evaluating the efficiency of an organic polymer from vegetal source used as coagulant for treating different types of industrial effluents. This coagulant (Flox-QT) is obtained from the Black Acacia (Acacia mearnsii). The effluents studied were produced in petrochemical, leather, cork stoppers, metalworking, olive oil, glue, paint (printing), textile and paper industries. The parameters analyzed in the effluents before and after treatment were selected according to the type of wastewater and included pH, conductivity, apparent colour, turbidity, total suspended solids (TSS), chemical oxygen demand (COD) and some metals. The coagulant proved to be efficient for almost all effluents tested. The best results were obtained for the paper industry wastewater, with 91% removal of chemical oxygen demand and 95% of total suspended solids removal. The estimated cost of this treatment would be only 0.24 Euro per cubic meter of treated effluent, only regarding the price of the coagulant and the required dosage. The use of this coagulant is also adequate for the valorisation of the sludge obtained, which in this case could be recycled for paper production.

Optimização do tratamento por lamas activadas do efluente líquido da Mundotêxtil

A Mundotêxtil foi fundada em 1975 tendo iniciado a sua actividade na área comercial de produtos têxteis. Actualmente é o maior produtor nacional de atoalhados de felpo e emprega 575 colaboradores. Como resultado do seu crescimento e sobretudo da actividade de tingimento de fio e felpo, as necessidades de água são consideráveis e o volume de efluentes gerados nos processos industriais é cada vez maior a empresa avançou com a construção de uma estação de tratamento por lamas activadas, colocando-a em funcionamento em Setembro de 2004. Inicialmente surgiram dificuldades para a remoção da cor e da concentração da Carência Química de Oxigénio (CQO) de modo a cumprir os limites máximos de emissão permitidos nas normas de descarga no rio Ave e no Decreto-Lei nº 236/98, de 1 de Agosto. Com a descarga de parte dos efluentes no SIDVA e a utilização de um coagulante adicionado ao reactor o tratamento passou a apresentar melhores resultados. O intuito deste trabalho é o de apresentar soluções de modo a optimizar o funcionamento do tratamento biológico da Mundotêxtil. A optimização pode começar na concepção dos produtos, pode incidir no processo de fabrico para além de poder ser efectuada no seio da estação de tratamento biológico. Foi efectuado um estudo do tratamento biológico por lamas activadas no Laboratório de Tecnologia Química Profª Doutora Lída de Vasconcelos, laboratório tecnológico do Instituto Superior de Engenharia do Porto (ISEP) que decorreu nos meses de Maio, Junho e Julho de 2010. O estudo laboratorial foi efectuado para três situações distintas: 1) tratamento do efluente bruto sem qualquer tipo de pré-tratamento (ensaios 1 a 3); 2) tratamento do efluente bruto submetido a pré-tratamento com coagulante Ambifloc BIO MD (ensaios 4 e 5) e 3) tratamento com adição de fungos ao tanque de arejamento (ensaio 6). Foram utilizadas duas instalações de tratamento alimentadas a partir do mesmo tanque de alimentação. Os dois sistemas eram idênticos, diferiram nos caudais de alimentação de efluente que foram alterados ao longo do estudo. O efluente a tratar foi fornecido pela empresa Mundotêxtil, sendo recolhido por diversas vezes ao longo dos ensaios. Este efluente foi retirado após o pré-tratamento da empresa, ou seja este efluente é o mesmo que alimenta o tratamento biológico da Mundotêxtil. Devido a este facto o efluente usado no estudo laboratorial teve uma variabilidade no período em que decorreu o estudo, nomeadamente em termos de concentração de CQO e cor. A relação entre a Carência Bioquímica (CBO5) e a CQO situouse entre 0,47 e 0,63 o que traduz que está dentro dos valores típicos para um efluente têxtil. Os melhores resultados globais de remoção de CQO foram obtidos no ensaio 5 e estiveram compreendidos entre 73,2% e 77,5% para o ensaio 5.1 e entre 62,9 e 73,2% para o ensaio 5.2. Neste ensaio foi utilizado o coagulante. Todos os valores de concentração de CQO obtidos nos efluentes dos decantadores para os ensaios 2, 5 e 6 são inferiores aos valores limite de descarga definidos nas normas de descarga no rio Ave e o Decreto-Lei 236/98. Os valores de concentração de Sólidos Suspensos Totais (SST), pH, fósforo, CBO5 e cor nos decantadores cumpriram os limites de descarga definidos nas normas de descarga no rio Ave e no Decreto-Lei nº 236/98 em todos os ensaios. Os parâmetros cinéticos obtidos para os ensaios com descorante são os que melhor se ajustam ao projecto de uma instalação de tratamento biológico por lamas activadas do efluente da Mundotêxtil. Os valores obtidos, após ajuste, são os seguintes: k=0,015 L/(mgSSV*d); Sn=12 mg/L; a=0,7982 kgO2/kgCBO5; b=0,0233 [kgO2/(kgSSV*d); y=0,2253 kgSSV/kgCBO5; kd=0,0036 kgSSV/(kgSSV*d. Com base nos parâmetros cinéticos obtiveram-se os seguintes resultados para o projecto de uma estação de tratamento biológico por lamas activadas: · Tempo de retenção hidráulica no reactor de 1,79 d, · Volume do reactor igual a 3643 m3 · Consumo de oxigénio no reactor de 604 kg/d · Razão de recirculação igual a 0,8 · Volume total do decantador secundário igual a 540 m3 · Diâmetro do decantador secundário igual a 15 m A quantidade de oxigénio necessário é baixa e o valor mais adequado deverá ser da ordem de 1200 kg/d. Também foi efectuada uma análise aos produtos químicos consumidos pela empresa na área das tinturarias com a finalidade de identificar as substâncias com uma maior influência potencial no funcionamento da Estação de Tratamento Biológico. O encolante CB, Cera Têxtil P Líquida, Perfemina P-12, Meropan DPE-P, Meropan BRE-P, Indimina STS e Benzym TEC são os produtos químicos que têm uma influência potencial mais significativa na qualidade dos efluentes. Devido ao facto das temperaturas do efluente alimentado ao tratamento biológico da Mundotêxtil oscilarem entre 35 ºC e 43ºC efectuou-se um estudo às necessidades de água quente das tinturarias e por outro lado à capacidade de aquecimento dos efluentes disponíveis. Actualmente a racionalização dos consumos de água é cada vez mais premente, por isso também é apresentado neste trabalho um estudo para a substituição das máquinas convencionais das tinturarias com uma relação de banho 1:10 por máquinas de banho curto (1:6,5). Verifica-se a redução de consumos de 40% de água, 52% de energia eléctrica, 35% de produtos químicos, 51% das necessidades de vapor e por consequência um aumento da produtividade. A empresa pode reduzir os consumos de água em cerca de 280.000 m3/ano. A utilização do pré-tratamento com o coagulante permitirá baixar a concentração da CQO e reduzir a cor à entrada do reactor tratamento biológico. Deste modo é possível manter um tratamento eficiente à saída do tratamento biológico nas situações de descarga de cores carregadas e carga orgânica elevada. Com este conjunto de soluções, quer sejam aplicadas na totalidade ou não, a empresa Mundotêxtil pode enfrentar o futuro com mais confiança podendo estar preparada para fazer face à escassez de água e custos cada vez maiores da energia. Por outro lado pode tratar os seus efluentes a custos menores. A substituição das máquinas de tingimento por máquinas com relação de banho mais baixa (banho curto) implica investimentos elevados mas estes investimentos são necessários não só por motivos ambientais mas também devido à grande competitividade dos mercados.